Penaeus vannamei (Pacific white shrimp): 113808017
Help
Entry
113808017 CDS
T06111
Symbol
gig
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04140
Autophagy - animal
pvm04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113808017 (gig)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113808017 (gig)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvm01009
]
113808017 (gig)
Protein phosphatases and associated proteins [BR:
pvm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113808017 (gig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
113808017
NCBI-ProteinID:
XP_069978293
LinkDB
All DBs
Position
5:47456340..47485549
Genome browser
AA seq
1824 aa
AA seq
DB search
MSKDSKAERSFPERLKRWFRLDRGNVTGSREIRLTEELRAELGPESLTSTRIKAIKELSE
VLASKKIEENGIEKLWLLVQDLLSLTSPTEQRHTTLQMLTTLTAAHDRIGAMRHVFYNYI
SENYQHEDTKPMFDFFREVIADGKQLEYIEEFVGPFLLEWLPGLLASPQAADALSLLVNL
VKFNAAYLDEPVVTGYVKQVVVQLHRANGETEALQCLRVLDAVLAYSYLPSPALPTFIIA
LTRAVNVPQLTAETWKIMRNLLGTHLGNSGLYVLCRLIQSDGDPHMVRGAIFFLTSALWG
NNKVSSLNYKPAAVLPTLQQAGNNNHVLVVYEVALSVQKLVSKMSLELHLSSWDLLLDTL
SKLFEHAVALEESHEKQTILTVLKDTLDVIEQLIDLQQFGGSLDKFFFLIDLYAHLRPES
SVLRLLDHQAQAMDPLRPHWLANLGTLLHQYYRRDPRPNIRTKALAILSDVYNNNRYLYG
TDMVRNVVTIQMEGIETERNVGVRTAAVNLLVHIAITQKSSVVPDILNMLEKIVIAPYSS
AGDCVQVVRESEAADIIAAVAGLIRIFKKKLWELPSSYAIQAYRILLSCIEHHYRNQTVL
EGVSRVRLQIFEMIFEMRANSKYQLGFPRISEKNGQGEEDSSTSLLPQYSPYIVVDHKHG
QLLKDAEQEHGDKQLPSGIASEASQEEPEGALSDATPLLAQPKVEVTHLSLTQSAMTVIV
AMKKEKDWEVLRMILERVPQVLQNKALILSRDGNDIDYFAAALCALVTEKSLGLPESLHN
TPAKFTKSDFQSFVFPVLATLASYHMHLESVIQQKVIKCLELGVLSRCAGPLCVSALTLC
VLEMRDSMIKLLREVMINLSKITATVQNAQPILEFLSTLLHLPKVYASFVSDQYMSIFAI
AIPYTNPFKFNHYIVSLAYHVIAMWFLKCRLPFRRHFVPFISKNLNMILTNEEAATRRRS
ASASEQAILLARAKMARSQSFSHKRLEEIYNSEAEPPLNTGRGKGDIDMIQFHNDLRETC
VDLMARYTFASCAPLPKRGTVAEMLVSGGQSQTWLIGNKLITITTSGCSQRPLRQGLCDK
CLQLCNLEKRTPAPETFAASTNLNRRRHRSEFHRTISHEAKHKPQSKDDLHMWSVKRENG
DGLTPLVDQGDGVAWSSSNMGEAGDSESSPVDKLVFGSNVGSSSTAPNENKRVEQHLCAC
WCQGWAEIYIRQPTGNMSWMMRVQNQQTLVASGGELPLHDLSVLFANTPNSQSVDFSGPL
FANRRIDSETLEDEKYEQELLSQPFEETRPRAFSGASDRTQDSDPGSQRDSSGWSSGAPS
HTSSDPRINSADAGDDTRGSSPLTNTSTSGENPDDPRVPVQRCHSSPEMSEGAVVGGNEV
MQQAVDEEDPQTTTSTPPQAVPSDTEHVSAVAKPVKPKPRFEPTIGGGGSVGSTSPPPIP
ATRVRHTSAYQTKSVGSGGSISPGSTTGGSSNPDADVDDGSPRPMRRGRGHTISDMNPAS
RKLHSRASNAAKKMSTSKEGKGGISPSFVFLQLYYHGCLGGGSERPLLVPTQQQEIQRAV
RVLDLMRPQETHKIGVLYVGPGQTTEQEILRNSFGSLRYMTFLQGLGSVLELSSVSQDEV
FLGGLDTKGNDGKLVYIWHDDVMQVVYHIATLMPTKESDPNCTGKKKHIGNNYVTIVYNE
SGQSYNINTIKGQFNHTIVEVVPADHSTNSVGVLCRPELADFVGGGGDPRLVSDTNLPIL
VRQLALHADLASMIWESLNRPPHNPYASNWLERLRKIRKIRQTILTSPEGQQSANTLDFT
DMIETDKGEKARVGSSANWNPFLT
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggacagcaaggcagagaggagttttccagaaagactcaaaagatggttcagg
ctcgatcgcggaaatgtgaccggaagccgagagatcaggctgacagaggagctcagggca
gaactggggccggaatcactcacgtcaacgcgcataaaggccatcaaagagctcagtgaa
gttctcgcctcgaagaagatagaagagaatgggatagaaaagttatggctcctagtgcaa
gatcttctttccctaaccagtccaacagaacagcggcacacaacattgcagatgctgacg
acactaacagcagctcatgacagaataggagctatgcgacatgtgttctacaactacatc
tccgagaattaccagcatgaagacacaaagccaatgtttgatttcttccgtgaggttata
gcggatgggaaacagttagagtatatagaagaatttgtaggtccgttcttgttagagtgg
cttccgggcttgttagcctcgccgcaagctgcagacgctctcagtcttttggtcaatcta
gtcaagtttaatgctgcctatcttgatgaacctgtcgtcactggctatgtcaagcaagtt
gttgttcagttacatcgggcgaatggcgaaactgaagccttgcagtgtttacgcgtcttg
gatgctgtgttagcctacagttacctaccctctcctgctcttccaacattcatcattgct
ctcacgcgagcagtcaacgtgcctcagttgacagctgaaacttggaagatcatgcgcaac
ctcctgggcactcacctcggaaacagtggtctttacgttttgtgccgattgatacagagc
gatggagatccacacatggtccgaggagccattttcttcctgacttctgctctttgggga
aataataaggtgtcttcactaaattacaagccggcagctgtattgccaacactgcagcag
gccggaaacaacaaccatgtgctagtagtgtatgaggtggcgctgagtgtccagaaattg
gtttccaaaatgtccctggaactacacctgtcctcctgggatctccttttagacaccctt
agcaagctttttgaacatgcagttgctttagaggaaagccatgaaaagcagactatccta
acagtactgaaggacactctggatgtcattgaacagctgattgacctgcagcagttcgga
ggatctttggataaattcttctttctgattgatctctacgcccaccttcgtccggaatca
tcagtcttacgtctcttagaccaccaagcccaagccatggatccactgcgtccacattgg
ttggctaatttaggaacgcttctacaccagtactatcggcgggacccaaggccaaatatc
cgaaccaaggcgctagctatactgtctgatgtgtacaataataacaggtacttgtatgga
actgacatggttagaaatgttgtcactatacaaatggaaggcattgaaacagaacggaat
gtaggagtcagaactgcagctgtcaacttgctggttcacatagccatcactcagaaatcg
tctgtcgtgccagatattctcaacatgctggaaaagatcgttattgccccatattcaagt
gccggtgactgtgtgcaagtagtgagggagagtgaggctgcagacattatcgctgcagtg
gcaggtttgataaggattttcaagaaaaaattatgggaattaccatcatcatatgccata
caagcttataggatattgctgtcctgcatcgaacatcattatcgtaatcagactgtactt
gaaggagtgtcgagagttaggcttcagatatttgaaatgatttttgagatgagggccaat
tccaaataccagctaggattcccaaggatcagtgaaaagaacggtcaaggagaggaagac
agttccacctcattgcttccacagtattcaccgtacatagtagtcgatcataaacatggg
cagctactaaaggatgctgaacaggagcacggtgacaagcagttaccatcaggtattgca
agtgaggcaagtcaagaagaacctgagggagcactgtccgatgccactccacttctcgcg
cagcccaaggtggaggtcacacacctgtcgctaacacaatctgccatgactgttattgta
gctatgaagaaagaaaaggattgggaagtcttgcggatgattttggagcgtgtgccgcag
gtcctgcagaacaaggcacttatcctgtctcgtgatggcaatgatatcgactactttgcc
gctgctctctgtgctctggttacggaaaagtccctagggttgccagaatctctacacaat
actccggcaaaattcaccaagtcagatttccagagcttcgtctttccagttttggcaact
ctggcatcgtaccacatgcacttagagtccgtgatccagcagaaggtcattaaatgcctg
gagcttggtgttttaagtagatgcgcgggaccattgtgcgtgagtgctctgaccttgtgc
gttctggaaatgagagattcgatgatcaaactgcttcgagaggtcatgataaacctctcg
aagataactgccactgtccaaaatgctcaaccaatcttagaatttctttcaactttgctc
cacctgccaaaagtgtatgccagttttgtgtctgaccagtacatgtcaatctttgcgatt
gctataccgtacacaaatccattcaagttcaaccattatattgtgtcacttgcataccac
gtcattgccatgtggttcctcaagtgccgacttcctttcagaaggcattttgtgccattt
atatctaagaatttaaacatgattctaacaaatgaagaggctgccacacgaagaagaagt
gcaagtgccagcgaacaggcaatactccttgctcgagcaaaaatggctcggtctcagtcg
ttctctcacaaacgtcttgaagaaatatataacagtgaagctgagccacctttgaacact
ggtaggggaaagggagacatagacatgatccagtttcacaatgacttgcgggagacgtgt
gttgatttgatggcacgctacacctttgcatcctgcgcacctctgcccaaaagagggact
gttgctgaaatgctggtgtcaggaggtcagtctcagacctggctcataggaaacaagttg
atcacaatcacaacttctggttgttcacagcggccactgagacaaggcctgtgtgacaag
tgtttgcaactttgtaaccttgaaaaaagaacacctgcaccagagacttttgctgccagc
accaacctcaatcgtaggagacatcgctcagaattccataggacaatatcacatgaagca
aagcacaagccacagagtaaggatgacctacacatgtggtcagtaaagagagaaaatgga
gatggacttaccccattagttgaccaaggtgatggtgtagcctggtcaagcagcaatatg
ggagaggcgggcgacagcgaatcatcaccagttgataagttggtgtttggcagcaatgta
ggaagcagtagcacagcacccaatgaaaacaagcgtgtagagcagcatttgtgtgcttgc
tggtgccagggctgggccgagatatacatcagacagcctacaggaaacatgtcgtggatg
atgcgcgtccaaaatcagcagacacttgtcgcctcgggaggagagttgcccttgcatgac
ctgagtgtactctttgctaacacacccaactctcagtccgtggatttttcgggaccgtta
tttgccaaccggagaatcgattcagaaacgctggaagacgagaagtatgagcaggagctt
ctgagtcagccctttgaggagacaagaccgagagccttctctggggcatcggacaggacc
caagattccgatccaggttcccagagggattctagtggttggagcagtggtgccccctcg
cacacctcctccgacccccggataaactcggccgatgcgggtgacgacacgagggggagt
tctcctctgacgaacacgagcacttctggagagaacccagatgatccacgggttcctgtc
cagcgatgccattctagtccagaaatgagtgagggagctgtcgtaggaggtaatgaagtc
atgcaacaagctgtggacgaggaggacccccaaaccacaacctcaaccccaccacaggcc
gtgccaagtgatactgagcacgtgtcagctgtagccaagccagtaaaaccgaaacctaga
tttgagccaaccattggaggcggagggagtgttgggtcgacttcacctcctcccatccca
gccaccagagtacgacacacttctgcatatcagacgaagagtgtgggaagtggtggcagc
atctctcctggaagtaccacaggcggctcaagcaatccagatgcagatgttgacgatggt
tctccaaggcccatgcgaagaggcagaggccataccatatctgacatgaaccctgcctct
cgcaagttacactcacgagcatccaatgcagccaagaagatgagtacaagtaaggaaggg
aagggcggcatttcaccgagctttgtgttcctacagctgtattaccatggctgtttagga
ggaggtagtgaacgccctttgctcgttcccactcagcagcaagaaatccagcgtgccgtg
cgtgtactagaccttatgcgacctcaggagacgcacaaaattggtgttttgtatgttggt
ccaggacagacaacagagcaagagatattgaggaattcctttggatcgcttagatatatg
acttttctacaggggttgggttcagtgctagagctgagctccgtatcccaggatgaagtt
ttccttggcggtcttgacactaaaggcaatgacggaaagttagtgtatatttggcacgac
gatgttatgcaggttgtttaccatattgcaacgctaatgcccacgaaagagtctgatcca
aattgcacaggaaagaagaaacatataggcaacaattatgttaccatagtttacaatgag
agtggtcagtcatataatatcaatactattaagggtcagttcaaccacaccattgttgag
gtggtgccggccgaccactccaccaatagcgttggtgtactctgtcgaccagaattggct
gattttgttggcggaggcggggaccctcgattagtgtctgacactaaccttcccattctc
gtgcgtcagcttgctcttcacgcagatcttgcttccatgatatgggagtcgttaaaccgt
ccaccccataatccatacgccagcaattggctcgagagattaagaaaaatcaggaagatc
cggcaaaccatcctaacttcacccgagggccagcagtcggccaacacccttgattttacg
gacatgatagagacagacaagggtgagaaagcgagagtcggaagctcggccaactggaac
ccctttttgacctag
DBGET
integrated database retrieval system