Penaeus vannamei (Pacific white shrimp): 113808325
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Entry
113808325 CDS
T06111
Name
(RefSeq) RNA-binding protein FXR1
KO
K15516
fragile X mental retardation protein
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113808325
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113808325
Factors involved in mRNA localization
Other mRNA localization factors
113808325
mRNA cycle factors
Stress granule specific factors
113808325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_9
KH_1
Tudor_FRX1
Agenet
FXMRP1_C_core
DUF5929
Motif
Other DBs
NCBI-GeneID:
113808325
NCBI-ProteinID:
XP_027215505
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MDELNVEVLGPHGAYYKATVMDMIGDEVLVRYEGDWCQETRVAMTGVRLPPPGGPSPVEY
PEGTEVEIYDRLMNAPYSAYWKATIKMSKGDFHVVEFTGLQLTSGENIFPSEKIRLRNPN
PPITPKTFYKVEVEVPEDIRDYAGTEGAHRAFKKACLASRCVFNPETYKLILLSKNDQTL
KLANMLSDMHFRNLKQKVVLLYRTEEAAKQLESTRLQSTAGYIEEFSVRDDLMGLAIGAH
GANIQQARKVEGVTNIELEENTCVFKIYGESEEAVKKARAMLEYSEESVQVPRVLVGKVI
GKNGRVIQEMVDKSGVVRVKIEGDNEPEPTTPRTEGQVPFVFVGTVEAIHNASVLLGYHL
AHLKEVEQLRQEKLEIDQKLRNMHTTNSLGSNQGYPARRNDRGCNSDVETSSRGGRGRGG
PRGGRGRGGGGRGGDRYTNDRSGSGHWSRQATPDWEEGDASLPPRTSRRHNEERRRVADE
EETVLDAAETGSVGSLDRDSVTSEGKRRRRRHRKFRRRGGGGGSEMGDGEGFGTSADEGW
GSEENWGSHTGESWHANTGENWGSHGAGESWHANAGENWDAQPPSARAAKERTPGGDYGP
RRGAGRGPPDAPSSREGTLNRRRPPRHEGTPARQSPARRPPPPRKPAQSAVNGN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctcaatgtagaagtcctcggtcctcacggggcgtattataaggcaactgtg
atggacatgataggagatgaggtcctggtgcgctacgagggggactggtgccaggagacc
cgtgtagccatgacaggtgtcagattacctccccctgggggtccttcacccgttgaatac
ccagagggtacagaggtggagatctacgaccgcttgatgaatgctccttactctgcatat
tggaaagctacgataaagatgtccaaaggagatttccatgtagtagaattcactggatta
cagttaacaagtggtgagaacatcttcccctcagagaagatcagactgagaaaccccaat
cctcccatcacacctaaaaccttctacaaagtggaggtggaagtaccagaggacatcaga
gattatgctggtacagaaggtgctcacagagcgttcaagaaagcgtgcctagcgtctaga
tgtgtattcaacccagagacctacaagttgattcttctttcaaaaaacgatcagactctc
aagttagccaacatgttatcagatatgcacttcagaaatctgaagcagaaagtagtttta
ctttatcgaacagaagaggcagccaaacagttagaatctacaagacttcagtccacagcg
ggatacatagaagaatttagtgtacgagatgacctcatgggtctagccattggtgcacac
ggagctaacattcagcaagcccggaaagttgaaggagtaactaatattgaactagaagaa
aatacttgtgtttttaagatctatggagagtcagaggaagctgttaaaaaagcccgcgca
atgctcgaatacagtgaggagtcggtgcaagtaccgcgggtcctagtagggaaggtcatt
ggcaaaaatggacgtgtcatacaggaaatggtggacaagtcaggggtggtgcgggtgaag
attgaaggggataacgaacccgagcccaccactccgcggacagagggccaggtccccttt
gtctttgtcggcacagttgaggccatccacaacgcttccgttctactaggctaccaccta
gcgcatttgaaagaagttgagcagctcagacaagaaaaacttgaaattgaccaaaagtta
agaaatatgcacacgacaaacagcctaggaagtaatcaaggatatccagcccggaggaac
gatagaggatgcaacagcgacgtggagacaagcagccgtggtgggcgaggcagaggtggt
ccccggggtggacgtgggcgaggcggaggcggcaggggaggagatcgctacaccaacgac
cgttccggatctgggcactggtcgcggcaggccacgccggactgggaggagggcgacgcc
tccctcccgcccaggacctcgcgccgccacaacgaagagcgccgacgagtcgccgacgag
gaggagacggtcctggacgccgccgagaccggcagcgtcggcagccttgaccgagattcc
gtgacgagcgagggcaagaggcgccggcgccgccaccgcaagttccggcgtcgcggcggc
ggcggcggctccgagatgggcgacggcgaaggcttcggcacgtcagcggacgagggctgg
ggcagcgaggagaattggggctcgcacacgggcgagagctggcacgccaacaccggtgag
aactggggctcgcacggcgccggcgagagctggcatgccaacgccggcgagaactgggat
gctcagcccccatcagcgcgcgccgccaaggaacgtacgccgggcggcgactacgggccg
cgtcggggcgccggccggggcccccccgacgcgccctccagccgtgagggcacgctcaac
cgtaggcggccgcctcggcatgagggaacgcccgccaggcagtcgcccgcccgtcgccca
cccccgcctcgcaagcccgcgcagtcggccgtgaacggcaattaa
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