Penaeus vannamei (Pacific white shrimp): 113808345
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Entry
113808345 CDS
T06111
Symbol
Nup154
Name
(RefSeq) nuclear pore complex protein Nup155 isoform X1
KO
K14312
nuclear pore complex protein Nup155
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113808345 (Nup154)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113808345 (Nup154)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113808345 (Nup154)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
113808345
NCBI-ProteinID:
XP_027215557
LinkDB
All DBs
Position
17:complement(8113143..8126739)
Genome browser
AA seq
1302 aa
AA seq
DB search
MQQNTLSTTLSFGGGEGGGDGVLQDLEIAGRLVDKHLNYDSSFPSLLDMLRVSPQGSATV
SGLSESDYPNSGDPRSIRHLSFTRKVPLPSELMHHFQHMQCNCMMGLFPEINRAWLTIDS
DIYVWVYEDGRDLAYFDGLHETILSVGLVKPKAGVFKKYIEYLLCLTTTSEIVLLGVSFS
QTADEEGNSGMHLLPEPLFSVPTDGSYILTIRGTNDGRIFMGAKDGCLYELVYQAEDGWF
SRKCQKVNHSRSTISYLLPFLAFSEDDPINQVEVDDSRHILYTLSEKGTITVYDLDADGK
NTCRVVAVPHNNIMNAALQVAKTVDKSNFKSVVSLCPISTSESPHIHLVVVTGTGVRLYY
TTMPLVGGLTQRPSQLTLLHVRLPPGFAANATVYRPTKVHKALYSHGTGVLCSNESNEAD
TVWTMSSDQYPYHPTLAESQSTHAVDGFVWALADVTPQLWCSALNPTTPQGTKPPLLVTQ
HQQSPRQLVLLSATGAHVLTFLRPVDQLRQMLEESGGAESNMVKEFFSAMTPTQACATAL
IIATDPHRPNAQVAEWATRALFLYGANPPPAPVTFPPQTPAGYNFHPTQVSTPMPGQATN
TALVQDAQFSPLHNALYLYLARILRPVWASSVAKETLVDGKPVLMSSMTAEELGFLAERV
DLLAKFLLTNQGGTTPLQPLNASNTSLNITRYGGDGSERASLLALRSLLSQALEVLKLMT
VLSTHNFTTITGSLQKEIREQLRTMTFRDLVLTGREVCRSLIMALLDRYHGDNASADAIS
ERLRDICPGLYRIEDAKLAKANEIILAAKANTNKAEKEKGFKEAVALCKQIGHHVNVNGI
SSQLASGGAYEGVVDLCLSVAAQRDPAGLALHYYKNNEPADDHQGYMAFTSRMECYRVIM
DQLNQLVGAGVVPQTSPTVPSRPGPPTPPPSTLPSTDATQYANQMMNLIVGSNDELSHVT
LYQWLVDTNRTDRLLAITSPYLETFLTRSNGQSPLHHLLWRYYERNRDYFKAAKTLLLLA
EQIGDTPVNVRVEYLSRALMCLSSCEMNTASSYSDFMLHMEEKKEVARVQLMVLDALQGE
GASADVIAQVNSSLLTLTTLYEKFAEPWALWECKLAIVHCAGHSEPQLVQSIWTNLIDRE
LERSRVEPVETRVDSLSSKIKALARLYSANPNYFPLEHIIKECEVRSVRLRTNTSWVVTA
LQGCGIQVSRLINIYHKLYRSGDSVWEVERSPYHLLGVLAHLITMLVDNEAAVQPPQKRA
LREQCLDYVAEYLTDLGASADASAGVISAHLKTCQAKLERFV
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaacacgctcagtacaaccctcagttttgggggaggggagggtgggggcgat
ggtgttctacaggacttggaaattgctggaaggcttgttgacaaacatctcaactatgat
tcaagttttccttcgcttttggatatgcttagagtctctcctcaaggaagtgcaactgta
agtgggctgagtgagagcgactacccgaacagcggtgacccaaggtccataaggcacctc
agttttacccgcaaggttcctctaccgtcagaactgatgcaccatttccaacatatgcaa
tgtaactgcatgatgggccttttccctgagattaatcgagcctggctgactatcgacagt
gacatatatgtatgggtgtatgaggatgggagagacttagcatactttgatggccttcat
gaaacaatcctaagtgtaggtcttgtcaaaccaaaagccggagttttcaaaaaatatatc
gagtatctcctgtgcctcacaaccacttctgagattgtgttattaggtgtatcattctca
cagacggcagatgaagaaggcaactctgggatgcatctgttaccagagcctctattttct
gttccaactgatggctcctacattcttaccattaggggcaccaacgatggtagaattttc
atgggagccaaagatggttgcctctatgaattagtctatcaggcagaagatggttggttc
agtcgaaagtgccaaaaagtaaatcactccagatcaacaatatcctacctgctacctttc
cttgccttctctgaggacgatcccattaatcaggtggaagtagatgacagtcgacacatt
ctgtacaccctgagtgaaaagggaaccattacagtgtatgatttggatgcagatgggaag
aacacatgtcgagtggtcgctgttccccacaacaatatcatgaatgcagcactacaagtt
gccaaaactgttgacaaatcaaactttaagagtgttgtaagcctctgtccaatcagtacc
agtgaatcaccacacattcacttggttgttgtcacaggtaccggtgtgagattatattac
acaacaatgcctctggttggaggactcactcagagaccatcccagctgacactactccat
gtgcgactcccgcctggctttgcagcaaatgctactgtttaccgacccaccaaagtacac
aaggcactctattcacatggaactggtgttttgtgttccaatgagagtaatgaggcagac
actgtatggacaatgagtagtgatcagtacccataccatccaactttagcagaatcacaa
agtactcatgctgttgatggctttgtttgggctttggcggatgtgactccccagctctgg
tgctcagccctcaacccaacaacaccccaggggacaaagccacctcttctggtaacccag
caccagcagtctcctcgccagttggtcttactttctgccacaggtgcacatgtactcaca
tttttaagacctgtggaccagttacggcagatgttagaagagtcaggtggagcagagtcc
aacatggttaaagaattcttttctgcaatgacacctacacaagcatgcgccacagcactg
attattgctactgatcctcatcgtcctaatgctcaggtggcagaatgggcaactcgtgcc
ttatttttgtatggtgccaatcctccccctgcgccagtaacatttcctccacaaacacca
gcaggctacaattttcatccaacacaagtatcgactcccatgcctggtcaggctacaaac
acagctcttgttcaggatgctcagttttcacctttgcataatgccctctacctttaccta
gcaagaatcctaagacctgtatgggcaagttcagttgccaaggaaacactggtggatgga
aaaccagttctgatgagttcaatgactgctgaagaattaggtttccttgctgagagagtg
gaccttctggccaaattcctcttgaccaaccaaggaggaaccactccccttcagcctctt
aatgcgtcaaacacaagtctgaacatcactcggtatggaggggatggttcagaacgtgct
tccctcctagctttgaggtcacttctcagtcaagcgctggaggtgctgaagctcatgaca
gttctctctacccacaacttcaccacaattacaggaagcctgcagaaagaaatccgggaa
cagttgcggacaatgaccttccgagatttagtcttaactggcagagaggtttgccgtagt
cttatcatggctctgctagacagatatcatggagataatgcctcagctgatgctatatca
gaaaggttacgggacatctgtccaggactctacagaatagaagacgccaaactcgcaaag
gcaaacgaaatcatcttggcagcaaaggcaaacacaaacaaagctgagaaggagaaaggt
tttaaggaagcagtggcgttgtgcaaacaaattggccatcatgtcaatgtgaatggcatt
agcagccagctcgccagtgggggggcctatgaaggagtagttgacctttgccttagtgtt
gcagcccagagagaccctgctggcttagctcttcattattataagaataatgagccagca
gatgaccatcaaggctacatggccttcacatccaggatggagtgctaccgagtgataatg
gatcagttgaatcagctggttggtgcaggtgttgttccccagacatccccaacggtgccc
tctcgtcctggcccgcctacacccccaccgtctacactgccatctacagatgctacacag
tatgctaatcagatgatgaacctaatagttggcagcaatgatgaactatcacatgtaaca
ctgtatcagtggctagtagacacaaatcgtaccgaccgtctcttggccataacctcccca
tacttggagaccttcctcactcgatccaatggccagtcaccactccaccatctgctttgg
agatattatgaaagaaatagagattatttcaaggctgcaaaaactctcttgctcctggct
gaacagataggagatactccagtaaatgtacgagtggaatacttgtctcgggcactcatg
tgtctcagttcctgtgagatgaacacagcctcaagttattcagactttatgcttcacatg
gaagagaagaaagaagttgctcgtgtacagcttatggtgctagatgctctccagggagaa
ggggcaagtgctgatgttattgcgcaggtcaattcctctctccttaccttgacaacactg
tatgaaaagtttgctgaaccctgggcattgtgggaatgtaaacttgccattgttcactgc
gcaggacactcagaaccccagcttgtacagtcaatttggacaaatctcattgaccgtgaa
ttggagaggtcaagagtcgagcccgtggagacacgtgtggattctttgtccagcaaaatc
aaagcccttgctcgtttgtattctgcaaaccctaactacttccccctagaacacattatc
aaggaatgtgaggtccgttcagtccggctgcgtactaatacatcttgggtggtcacagcc
ttgcaaggttgtggcattcaagtgagcagactcatcaacatctatcataagttatatcgt
agcggagatagcgtttgggaggtagaacggtcgccataccatctcctgggtgtgttggca
cacttgatcacgatgttagttgacaatgaggcagctgtacaacctccacagaagcgagcg
ctaagggagcagtgtttggactacgtagctgagtacttaactgacctgggagcttcagcg
gatgcttctgcaggagttatctcagcacatttaaagacttgccaggcgaagctagaacga
tttgtttag
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