Penaeus vannamei (Pacific white shrimp): 113808921
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Entry
113808921 CDS
T06111
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113808921
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
113808921
NCBI-ProteinID:
XP_027216226
LinkDB
All DBs
Position
Unknown
AA seq
1890 aa
AA seq
DB search
MKITYLLGLCILFLFVIVCPGLSEEQGVVEEDQILQQDTEEMLADEPADESDGNNEGAKG
GGNDVNDEDDDETEEQNEDELQSDDPKGFKRGRGRSKSYRTSLSSTRVIRPGYGQRTGHP
CDQGSCYPGTGNLLIGREARLSATSTCGLENRERYCIVSHLKDRKKCFWCDSRPQWDGSP
QYSHKIDNIVYRSDPRTRRRSWWQSENGKEDSSVRLDLEAEFHFTHLIITFRTFRPSAML
IERSFDFGKTWKVYRYFAYDCNEAFPGIPTGPPSAINDVVCESRYSAVEPSTEGEVIFRV
LAPNIEIENPYSEDVQNLLKITNLRVNFTKLHTLGDQLLDNRREIKEKYYYAIYEMVVRG
SCSCYGHASRCLPLPGVEDRPDMVHGRCECTHNTKGLNCEECEDFYNDLPWRPAIEKESN
ACKKCNCNNHATRCHFDPDVYESSGRISGGVCDDCAHNTYGRNCEQCIPYYYQDPARDIR
DADICQPCNCDTRGSIDDAICDSHTDVPAGLLAGRCHCKTNVDGLKCDHCKAGYWNFTAD
NPEGCQACTCHLLGTLNNAGCNVLTGECSCKRFVTGRDCNQCLPQHYGLSEHPDGCQPCS
CDRGGSLDNNCDVLSGQCKCRPHVTGRRCDTPEEGYYVASLNYLTYEAELARGSELYCEE
ASLYDFRQSRLSNCQVVMREPYRDGRDTTWTGLGFMRVFEGSYLEFEIENIETSMEYDLV
IRYEPQFQGVWENVMVTIERPEPIDPTGSCGNTRPTDDQMVVNLPGNNRHVTLFPPVCLE
AGKRYKVRIDFRRSNANTDSPSASILVDSIMLIPKAERLPFYSGSSELDDLRYEFERYRC
SEGFYDGQKVENIPEICRKNHFGSIGFYVYGQAFACQCDGTGSYSSICSSMGGQCDCKPN
VVGRRCDRCAPGTFGFGPEGCKPCDCSPVGALDNFCDQQTGQCKCRPNTYGRQCNECQPG
FWNFPNCQRCECNGHADTCDSYSGICHECRDNTTGPNCALCIEGFYGDPRLEVGIACRPC
PCPGTVDSGHSFADRCTLDPRTKDVICECADGYAGSRCDVCADNYFGNPEVPGGQCESCD
CSNNIDISRPGNCDARSGECIQCLFNTFGFNCERCRPGYYGDALNQQCRECVCNILGTNQ
TIEFCDHETGQCPCLPNVLGLECDRCAANHWKIASGMGCEPCACDPVGSFSEQCNEQHSR
TYSSRGTFDGQCQCRPGFGGRQCNQCQTNFFGNPRVECLPCNCNPEGSETLQCNHETGHC
ECREGIGGVKCDECARGFTGRAPYCQTCGECFDNWDLILNDLRERTEALIAAAGQIKQTG
ATGAYSHEFESMEEKIADVQNILLTANLTSQNLASLSSLISELTDNLTVAASELQDLEHG
VDNTTQRISLATNALADLRLQAEELKNQAGDLKEKATKLQEANVEGALNLTRVAGERSRV
AQEKVELTQVIVGESRRSRRRTENLLLHALDRFNRTQIKNAEDLAEMTDMLDEMYRGIPD
LNEQVCDRRGDPCDTYCGGAGCGKCGGLSCNNGLVNTAELALKFADDAKEMLKKKEASVD
ELLRGISGAKRQSDVASDLAQMAYDLAFSSRNLTDSYKARITKLLEEIEEYFSTPGAKPQ
EIRDLAEEVLSIVISLEPEQITDLAEKITLAIETLTNINAIIDATRNDLDLAIQLKERAD
RAKIKAEGTLGVAERVVEALTEASAAQDAAEQAIVQASDDIEATQTHLTQIASETSVAQA
KANSSLREVQDLERRVESVKLQYIINQQHLEDTTAAVNQADLKAQRAANDAKQLEDKYLI
VEEKLQIKFQAAEEARRRAEELRKRANKLASEAQVKLSMLKEMEVIFVKNEVILEDYEEE
IRRMEVSMEEYHEYISRKTEFYATCQSGRR
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgaagattacatatttactcggattatgtatattattcctgtttgtgatagtatgtcca
ggtttatcggaggaacaaggcgtagtcgaggaggaccagatcctgcagcaggacacggag
gagatgctggcggacgagccggcggacgagagtgacgggaacaacgaaggcgccaaagga
ggcggaaacgacgtcaacgacgaagatgacgacgaaacagaggagcagaacgaggacgag
ctacagtccgacgatccgaagggattcaaacggggacgaggcaggagcaagtcgtaccgc
acttcgctgtccagcacgagggtcatccggccaggatatgggcagaggacgggacatcca
tgtgaccagggttcctgctacccaggcacgggcaacctgctcatcggacgagaagccagg
ctctcggcgacgtccacgtgtggcctggaaaatagggagcgttattgcatcgtgtcgcat
ctgaaggaccgcaagaagtgcttctggtgcgactctcggcctcagtgggacggcagcccg
cagtactcgcacaaaatcgacaatattgtgtacagatcggatccccggacgagacgaagg
tcatggtggcagagtgagaacggaaaggaagacagcagtgtccgcctagacttggaagcc
gaattccacttcacacatcttataattacattcaggactttccgtccatctgctatgctt
attgagagatcttttgattttggtaaaacatggaaggtttatagatactttgcttatgac
tgtaatgaagccttcccaggcattccaactggcccaccttcagctatcaacgatgtggtt
tgtgaatctcgttactctgcagttgagccatctacagaaggagaggttatcttccgagtt
ttggcaccaaatattgagattgaaaatccatacagtgaagatgttcaaaatctcttgaag
ataaccaatttgcgtgtgaacttcacaaaacttcacacacttggtgatcagttactggac
aacagacgagagattaaggagaaatattactatgccatttatgagatggttgtaagaggt
tcgtgttcctgctatggtcatgcttcccgctgcttacccctgccaggtgttgaagatcgc
cctgatatggtccatggacgctgtgagtgcactcataacacaaagggtttgaactgtgaa
gagtgcgaggatttctacaatgatctgccatggagaccagccattgaaaaggaatccaat
gcatgtaaaaagtgtaactgcaataaccatgccacgagatgccactttgacccagatgta
tatgagagctctggacgcatatcaggaggtgtctgtgatgactgtgcacacaacacttat
gggcgtaactgtgagcagtgtatcccatactattatcaggatcctgccagagacatccga
gatgctgatatttgccaaccctgtaactgtgacactcgcggatcaatagacgatgccatt
tgcgactcccacactgatgttcctgctggactgctagctggaaggtgccactgtaagact
aatgttgatggcctgaagtgtgatcattgcaaggctggttactggaatttcactgctgat
aatccagagggttgtcaagcttgtacatgccatcttctgggaacactcaataatgctggc
tgcaatgtcctgactggagaatgttcctgcaagcgatttgtgactggacgtgattgtaac
cagtgtttgccccagcactatggcctgtctgagcacccagatggatgccagccttgcagc
tgtgatcgaggaggttccctcgataacaactgtgatgtgctcagtggccaatgcaagtgt
cgtccccatgtcacaggtcgtcgttgtgacacacctgaggaaggatattatgttgcaagc
ctgaattaccttacatatgaagcagaacttgcaaggggctctgagctttattgtgaagag
gccagtttatatgacttcaggcaatccagactaagtaactgccaagtagtgatgagggag
ccctaccgtgatggacgtgacactacttggacaggccttggcttcatgcgtgtatttgaa
ggatcatacttagagtttgagatagagaacattgaaactagcatggagtacgacctagtt
atccgctatgagccccagttccaaggtgtttgggagaatgtgatggtaaccattgaacga
ccagaacccattgacccaacaggttcctgtggaaatactagaccaacagatgaccagatg
gttgtcaatcttccaggcaataatcgtcatgtgactctcttcccgcctgtgtgtcttgag
gctggcaagagatacaaagtccggatagatttcaggcgttccaatgccaacacagattct
ccatctgcttctatacttgtggattctattatgctgattccaaaggctgaaaggctaccc
ttctactctggctcatctgaactcgatgacctgcgatacgagtttgagagatatcggtgc
agcgagggcttctatgatggtcagaaagttgaaaacattccagaaatttgccgaaaaaat
cattttggcagtattggcttttatgtctatggtcaagcattcgcttgtcagtgtgatggc
actggcagttacagcagcatatgtagctctatgggaggtcaatgtgactgcaaaccaaat
gtagttggtcgtcgctgtgatagatgtgcaccaggaacatttggctttggcccagagggt
tgcaagccttgtgattgcagcccagttggagccttggacaatttctgtgatcagcagaca
ggccagtgcaagtgtcgaccgaacacctatggccgacagtgcaatgagtgccagccaggg
ttttggaactttccaaattgtcagcggtgtgagtgtaatggtcatgctgatacctgtgac
tcctacagtggaatctgccatgagtgccgtgataacaccactggtccaaactgtgccttg
tgcattgaaggcttttatggagatcctcgtctggaagtgggtattgcctgtcgcccatgt
ccatgcccaggcacagtggactctggacatagttttgctgaccgctgtacacttgatccc
cgtactaaggatgttatatgcgaatgtgctgatggatatgctggctcgaggtgtgatgta
tgtgcagataactattttggaaaccctgaagtgcctggaggtcagtgcgaatcttgtgat
tgcagtaataacattgacatctcacgtcctgggaactgtgatgcacgcagtggggagtgc
atacaatgtctctttaataccttcggcttcaactgtgagcgatgtcgcccaggttactat
ggagatgcacttaatcagcagtgcagagagtgtgtctgtaatatccttggtactaaccag
actattgagttctgtgaccatgagactggccagtgcccctgccttcctaatgtgcttgga
ctggagtgtgaccgctgtgctgcaaaccactggaagattgcatcaggcatgggctgcgaa
ccctgtgcatgtgaccctgtgggttccttctctgagcagtgcaacgagcaacatagccgg
acttacagctctagggggacttttgatgggcagtgtcagtgtcgacctggatttggtgga
cgccagtgcaatcagtgccaaacaaatttcttcggcaatccacgtgttgaatgcctgcct
tgtaattgcaacccagaaggttcagagactctccagtgcaatcatgagacaggacattgt
gagtgtcgtgagggcatcgggggtgtaaaatgtgatgagtgtgcccgaggattcaccggc
agagcaccgtactgtcagacatgtggggaatgctttgacaactgggaccttattttgaat
gacttgcgagagcgcacagaagccctgattgcagctgctggacagatcaagcagacagga
gcaactggtgcttacagtcatgagtttgagtcaatggaagagaagattgcagacgtacag
aacattttgctaactgccaatctaacatcacagaatcttgcttcactctcaagcctcatt
tctgagttaacagacaacctaactgtagctgcatcagaacttcaagacctggagcatggt
gtggataacactacacagcgcatttctttggctacaaatgccctggcagatcttcgattg
caagcagaggaactgaagaatcaagcaggagaccttaaagaaaaagctaccaagttgcaa
gaagctaatgttgaaggtgctctcaacctcaccagggtggctggagaaagatcacgagtt
gcccaagagaaggttgagcttactcaagtcattgttggggagtcaagacgctctcgccgc
aggactgaaaatcttcttctgcatgctttagatcgtttcaaccgcacgcagattaaaaat
gcagaggatttagcagaaatgacagatatgttggatgaaatgtatcggggcatccctgat
cttaatgagcaggtgtgtgaccgaaggggtgatccttgtgatacttattgtggtggagct
ggatgtggaaagtgcggagggctctcctgtaataatggtctcgtaaacaccgctgagctt
gccctcaagtttgcagatgatgccaaggaaatgctgaagaagaaggaggcttcagttgat
gagctattacgaggcatttctggggctaaaaggcagtctgatgtagcctcagacttggct
caaatggcctatgacctggccttcagctcccgcaacttaacagattcatacaaagcaaga
attactaagctcttagaagaaatagaagaatactttagcacacctggtgccaaaccccaa
gaaattagggatctagctgaagaggtcttgagcatcgttatctccctggaaccagaacag
attacagacctagcagagaagatcacacttgccattgagactctaacaaatattaatgca
attattgatgcaactaggaatgatctagacctcgcaatacagttgaaagaaagagctgac
agagccaagattaaggctgaaggaactctgggtgtagcagagcgtgttgtagaagccctc
actgaagcaagtgcagcacaggatgctgcagaacaagctattgtgcaggctagtgatgac
attgaggccacccagactcatcttacccagattgctagtgagaccagtgtagctcaggcc
aaagccaattcctcactaagggaggtacaggacctggaaaggagagttgagagtgtaaag
ttgcagtatatcatcaatcaacaacatctcgaagatacaactgctgctgtcaaccaggcg
gatctcaaagcacagcgagcagccaatgatgctaaacagctggaagataaatacttgatt
gtagaggaaaagctacagattaagttccaagcagctgaagaagccagacgaagggcagaa
gaacttcgaaagagagcaaacaaattggcatcagaagctcaagtcaagctaagtatgctt
aaggagatggaggtaatatttgtgaagaatgaggtaattcttgaagactatgaggaagaa
attcgcagaatggaagtgagcatggaggagtaccatgaatacatatcaaggaagacagaa
ttctatgctacctgtcagtctgggagacgctga
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integrated database retrieval system