Penaeus vannamei (Pacific white shrimp): 113809322
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Entry
113809322 CDS
T06111
Name
(RefSeq) fibrillin-1 isoform X1
KO
K17307
fibulin 1/2
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113809322
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113809322
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113809322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
EGF_3
Fibulin_C
FXa_inhibition
EGF
Plasmod_Pvs28
hEGF
TNFR_nem
Motif
Other DBs
NCBI-GeneID:
113809322
NCBI-ProteinID:
XP_027216671
LinkDB
All DBs
Position
8:complement(15171893..15217174)
Genome browser
AA seq
1911 aa
AA seq
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MEDRQAVHPRISAYTWLLLLAVASAAGDLEPTFGRCCAFGANWARESQQCATFPIPVAGV
PSEHQSICITAAGICCLRYYRDKQCQQGKQAAQAGQECTDITEEGGEFYKDCCDGCKLGL
VSGNMGMGCNSRFTFGFPWDSAYFHCCNQASVAATGVSDPQQPAYGGGSSSAVDFNTLYP
SVTDPVGLVPESEDLCARFPGKLCAHVCVPTPGSYRCQCRAGFTLSVDGKTCIQEAVTDR
CQINNPCAHICRDTGISIECLCNPGYALARDQRSCEDVNECVTGLNGCVDGEQVCYNEIG
SYSCINADGSFSTPGSLQGIGGHSIGGLAGDGQIGAPLGPYDLGRVSEQGHYSALAGGLG
SQAYPGLLPEGYDITQPEGRCPRGYKFNLEARACDDVDECEVTSGLCGHGGICQNTIGSY
TCTQIPGVDCPPGFAFDLNLQSCLDVDECILQTDNCNRTSHFCVNTRGSFTCQQKSGPTD
CIAGYKYSAEQKICIDVDECDENLHGCEPEKEQCRNTDGAYECDEKCDEGFQFSLALRTC
VDQDECVDEPCDPGWQCHNTIGSFVCHELPKAFCPAGYKPLNGTTTSCEDVDECVEGLHT
CHPETEICINEIGKYRCEALSINEVDFGVNPYEALPRATFQPPVQECAEGFGYDLNTKRC
LDVDECGAGLHNCTLSIERCINTLGGFICRPRRRCNAGFAPDPVTGRCKDVDECLAGVAK
CLPGEICINTEGAFECRVECQDGFRYDPTDPAVCVDINECLESPCRRGTRCVNTEGSYRC
TLSTTTTATSSPAVTTSPGPTPCPEGFGRNPNSLQCEDIDECLERVCESEQLCQNTYGSY
ICIWPPCDEGYRRDPNTNVCRDINECDEGSDTCQVGVEECVNTQGGHTCRAKPCPVGRKR
DPSNPRRCTDINECETTPCGPEEQCINTFGSYQCRRLAPCRPGFRRNSESRQCEDIDECE
ENDLCEENERCVNTRGSYRCRTLECSTGYQRDIFGRCRDINECETGEHNCHASKEECINT
QGSFRCKILPNCTQGFIRDPDTQKCVDVDECKEGTHDCRGGERCYNQYGHYTCSGSPADC
TKGFRYSSSDRRCHDIDECTENIDSCEWSTQTCVNTVSSYRCIDQQPTCDFGYRYDHEQR
ACIDIDECGEKKDDCEDGQYCVNTLGSYQCHTHGTASQTCHPGFTFNRTARVCMDIDECS
EGIHDCSASEECVNRRGDYACRPKEEVSNSVTTVPSREKEGSDTNELDQTQESGGSGNSK
RLRCQNGFRYNRRRRVCVDINECEEGRAICNKMTEVCINTKGDYWCAPAHKPVRATTSST
TTITSTTTTTTTTPAPPPLPPRPQAPQCPPGTLYNTAYRSCRDIDECNDNPCREFEVCEN
TQGSYKCSCREGFQRSSSTGECIDLNECQLGLHNCETTQRCDNTIGSYACIRIAGCGTGY
TLNHNTGECDDDDECELNTHDCDQLGPKYECFNIKGSFRCVKKICPNLQVLSFNGTCVDL
ACNPGFQPVQHGCIDINECEERISPCRRNERCLNTHGSYRCRPLLNCGVGYELNEIGNQC
VDIDECADGSHQCTGNQLCSNRQGSYICQCPPGYRLNSLRQCQDVNECESYFGNICSNTA
VCENTEGSYRCNCKKGFKHKADGLACEDVDECTEVDGICHHNCINVWGSYQCTCQPGFTI
ARDNRTCTDIDECSEYRGRGRLCIGICVNTPGTFKCSCPDGYQLASDGHTCKDIDECETE
SPCRGENEVCVNTRGGYKCNAIECPDSYTRDTEHKNRCKKAPVFCRDDDETCRRQPLSYS
YNFLPLVSNLTLPPTGQVDLFTMRGPLWSYTTVQFDLELESARAPLGVEAAKREFFHLKR
TSYNQAVISLVRPITGPQEVQLALNMQLYHQGAFGGSAIAKLLIYVSEYDF
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggaggatcgacaggccgtgcacccgaggatctctgcttatacctggcttcttttgctt
gcagtcgcctcagctgcaggagacttggagccaacctttggaagatgctgcgcttttggg
gccaactgggccagggagtcacagcagtgcgccaccttccccatcccggtggccggagtg
ccctcggagcatcagtctatctgcatcacagcggctggaatttgctgccttagatactac
agagataagcaatgtcagcaaggcaagcaagcagcacaggcgggtcaagaatgcacagat
attacagaggaaggaggagaattttataaggactgctgcgatggttgcaagcttggccta
gtcagtggaaacatggggatgggatgcaactcacgatttacatttggcttcccatgggac
tctgcctatttccactgctgcaaccaggcatctgttgctgctacgggcgtgtcagatcct
cagcagccagcttatgggggcggcagtagcagtgctgttgacttcaacacgctttatccg
agtgtcaccgacccagttggtttggtcccagaatcagaagatctttgtgctaggttcccg
gggaagttgtgtgcccatgtgtgtgtcccaaccccaggctcttacagatgccagtgccga
gctggcttcaccctctctgtggatgggaagacgtgcatccaggaagctgttactgataga
tgtcagatcaacaacccttgtgcccacatatgcagagatacaggaatttcgattgaatgc
ttatgtaatcctggctatgcattggcacgcgatcagagatcttgtgaagatgtcaacgag
tgcgtcactggtctcaatggctgtgtggacggagaacaggtttgttacaacgaaatcggc
tcctactcctgcatcaacgccgacggctccttctccacccccggctccttgcaaggcatc
ggagggcattccatcggcgggctcgcaggggacggccagataggggcgccgctgggaccc
tatgacctgggaagagtgtcggaacagggccactactctgcgctggccggaggcttaggc
tctcaggcgtatccgggtttattgcctgagggatacgatatcacccagcctgaaggacgc
tgcccccgaggctataagtttaaccttgaggcgagggcgtgcgatgatgtggatgagtgt
gaagttacctcgggtttgtgtggccacgggggtatctgccagaacaccattggctcttac
acctgcacacagatccccggggttgactgtccccctggttttgcttttgatttgaacctt
cagtcttgtttggatgtggatgaatgcatcctgcagacagataactgcaacagaacatcg
catttttgtgtgaacactcgcggcagcttcacttgtcagcagaaaagcggccccacagac
tgcattgctggctataagtacagtgctgagcagaagatatgtatagatgtggacgaatgc
gacgaaaatttacatggctgtgagccggaaaaggaacagtgccggaacaccgacggggct
tacgaatgcgacgagaaatgtgacgaaggtttccagttcagccttgctctgaggacgtgc
gttgaccaagacgagtgtgtggacgaaccctgcgatcccggctggcagtgtcacaacaca
ataggatctttcgtgtgtcatgagctgccaaaagccttctgtccagcgggatataaaccc
ttgaacggcaccaccacaagctgtgaagatgttgacgaatgtgttgagggtctgcacacc
tgtcatccagaaacagaaatctgcattaacgagattggcaaataccgttgtgaagcactt
agtatcaatgaagttgattttggtgttaacccatatgaagctcttcctcgagccacgttt
cagccaccagttcaggagtgcgctgaaggctttggttatgatcttaacacaaagagatgt
cttgatgttgatgaatgcggggctggtctgcacaactgtaccttgtccatcgaacgctgt
atcaacactctagggggcttcatatgcagaccaagaagaaggtgtaatgctggatttgca
cctgatccagtcactggaagatgtaaagacgtggatgaatgcttggctggcgtggccaag
tgccttcctggcgagatctgcatcaacaccgagggagcctttgagtgccgtgttgagtgt
caggatggcttcagatatgatcctacagacccagccgtgtgtgtagatatcaacgagtgt
cttgagtcaccgtgtagacgtggaacccggtgtgttaatactgaaggctcttatagatgc
actctttcaactaccacaactgcaacatcatcaccagctgtcactacaagcccgggacca
actccctgtccagaaggttttgggagaaatccaaacagtctacagtgtgaagatattgat
gaatgccttgaacgagtttgtgagtcagaacaactttgccaaaatacctatggctcatat
atttgcatttggcccccatgtgatgaaggttaccgaagggatccaaataccaacgtttgc
cgtgatattaatgagtgtgatgaaggaagtgacacatgccaagttggtgttgaggaatgt
gtcaatacacagggaggccacacatgtcgggcaaaaccatgtccagttggaagaaaaagg
gatccttcaaaccctagacgttgcactgatatcaatgagtgcgaaacaacaccctgtggg
ccagaggagcaatgcattaatacatttgggtcttatcagtgccgacgcctagctccttgt
cgtccaggcttcagaagaaatagtgaaagcaggcaatgtgaagacattgatgaatgtgaa
gaaaatgatctctgtgaggaaaatgaacggtgtgtgaacacgagaggaagctacagatgt
cgtactcttgaatgcagtactggatatcagcgtgacatatttggacgctgcagagatatt
aatgaatgtgagactggggaacataattgtcatgcttccaaagaggaatgcatcaacaca
caagggagctttagatgcaagattttgccaaattgcacacaagggtttataagggatcca
gacacccagaaatgtgttgatgttgacgagtgtaaggaggggacacatgattgccgtggt
ggtgagagatgctacaaccagtacggccattatacctgcagtggctccccagctgattgc
acaaaagggttcaggtactcttcttcagatagacggtgtcatgatattgacgagtgtact
gaaaatattgactcctgtgaatggtccacacaaacatgtgtcaacactgtgagcagttat
aggtgcattgatcaacaaccaacatgtgactttggctataggtatgaccatgaacagagg
gcatgcatagatatagatgaatgcggtgagaaaaaagatgattgtgaggatggtcaatac
tgtgttaacactttgggatcctatcagtgtcacacccatgggactgctagccagacatgc
catcctggatttactttcaataggacagcgagagtgtgcatggatattgatgaatgctcg
gagggaattcatgattgctcagcatcagaggaatgtgtcaaccggagaggggattatgct
tgtcgcccaaaagaggaggtgtccaattctgtaaccacagttccaagcagggaaaaggag
ggttctgacactaatgaattggatcaaacacaggagtctggaggcagtggcaatagtaaa
agacttcgctgccaaaatggttttcgttacaatagaagacgaagggtttgtgtagacatt
aatgaatgtgaagaaggtcgagctatttgcaacaaaatgacagaggtctgcattaatacc
aagggtgactactggtgtgcacctgcacataaacctgtgcgtgccacaacatcctctacc
acaaccatcacctctaccaccacaaccacaaccaccactcctgcccctccaccccttcct
cctcgtcctcaagctcctcagtgtccacccgggacgttatataatacagcttatagaagc
tgtagagatattgatgaatgtaatgacaacccatgtagagaatttgaggtctgtgaaaat
acccagggctcatacaaatgttcatgccgggaaggtttccaaagaagttcatctactggc
gaatgcatagatctaaatgaatgccagcttggtttacacaactgtgaaacaacacaaaga
tgtgacaacactattggctcttatgcttgtatacgcattgctggatgtggtacaggatac
actttgaatcacaatacaggagagtgtgatgatgatgatgagtgtgagctaaatactcat
gactgtgatcagctggggccaaagtatgagtgtttcaacataaagggctcattccgttgt
gtaaagaagatatgcccaaatttacaagtcctcagctttaatggaacatgtgtagatctg
gcatgcaatcctggctttcagcctgttcaacatgggtgtattgatattaatgagtgtgag
gaaagaatatctccttgccgacgtaatgaaaggtgcctcaacacccatgggtcgtaccgc
tgccgcccccttttgaactgcggggttggatatgaacttaatgagattggaaatcagtgt
gttgatatagatgaatgtgctgatggtagtcatcagtgtacaggaaatcaactgtgttcc
aatcgccaaggcagctacatatgtcagtgtcctcctggttatagactcaatagtttgcga
cagtgtcaagatgtaaatgaatgtgaatcttacttcgggaatatatgttcaaatacagcc
gtgtgtgaaaatacagaaggttcttaccgctgtaactgcaagaaaggcttcaaacacaaa
gcagatgggcttgcttgtgaagatgtggatgaatgcactgaagtggacggaatctgtcat
cacaattgtatcaatgtttgggggtcatatcagtgtacatgtcaaccaggatttaccatt
gcaagggataacaggacatgtacagacatagatgagtgttcagaataccgtggtcgagga
cggctttgtattggtatctgtgtaaataccccggggacattcaagtgctcttgtcctgat
ggttatcagttagcatcagatggtcacacttgcaaagacattgatgaatgtgaaactgaa
tcaccttgtcgaggggaaaatgaagtatgtgtcaatacacgtggaggctacaagtgcaat
gctattgagtgccccgactcatacactcgagacacggaacataagaatcgatgcaagaag
gccccagtgttttgccgagatgatgacgagacatgtcgccggcagccactgagctactcc
tataacttcttgccattagtgagcaatttgactcttccaccaacgggacaagtagatctc
ttcaccatgagaggtcctctttggtcatataccacagtgcagtttgacttggagttggaa
tctgcccgcgcacctctgggtgttgaagctgccaagagggaattcttccatttaaaacga
acctcctataatcaagcagttatctctcttgtgaggccaataactggcccacaggaagtg
caattagctctaaatatgcagctgtatcatcaaggggcttttggaggatctgctattgca
aaacttcttatttatgtgtctgaatatgatttctaa
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