Penaeus vannamei (Pacific white shrimp): 113809610
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Entry
113809610 CDS
T06111
Name
(RefSeq) microtubule-associated protein futsch isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113809610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113809610
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113809610
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
113809610
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
113809610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
113809610
NCBI-ProteinID:
XP_069997155
LinkDB
All DBs
Position
3:complement(10808870..10823776)
Genome browser
AA seq
1720 aa
AA seq
DB search
MSASRGGRLSRKRKKEEDCLTFTSIHDITDDFQEAATVFRVPKKAKTEKPPPAPRQRGRP
KKSSSVRQNLQTANTTSGNSSKNEDSSPEILDEADEFEAEAKPKDINLEKDTEAQQLGED
EEFLELEQSVCSESEKLCPSCKHIVPSALIGDHIKECMQKFKLVRRRSERNSASTKSKAK
EEDIEDDEVLPCPGFSKSIERILQNPPAKPEVREKTKSSATTEEAKNRREAIKTAKNAKN
DPDLAMALALSRSMVEDEAEKRASREEKLLELGLDDIVEEDRKVQPLLLPLQSASGKSQS
SKGPAKGKGKKRNAVWRNTVLLNRSKEERENIISEKVAALLASEDTQRNEWTGPGNGCRN
EPLLRYKDKSCSLWEAAHSHVDQPLREFYVPDLEPYIEPKKVAVGGLLRRLSQIPGRLNL
TAMDENSDSDSDEEGGRSYAVDRDSTQSVLAELLGSQDCLDITRAHNAIEAEDLSKFQEF
EDAAADPNVTMEAASGFWVFRLPGESSEDNVEGDKETIEEKDEGNERDSSDAVLVTGSAC
DSDESHIDKGVSDGVKDDQADEDNSLSSETKTEEMEVDNMQKSKSVAFSTIDLVDSASME
FCVVDDKMVMNSLEKSDKDKLVNTFCDLEDDTSCDTSENTLLEDVRSEKEVSKQVPTNCD
DIEPTESDGSEDCEISIILDTSSGRAECNKDKLHESHHEVEVSSVSPKYKDSSSKEQEVN
DLEPAKDFFDNDSNSSMNSAETQIFTENQDSSFNASFRQRLHTEETILYSDSTDLSLVTS
SYGDCQKRKQESEHLNRDEEGRVADSYKTRDKVGTSTETRISSDLQARGSNIRQGKDGKG
EQECKEKYSDKSEPRSPDPLHAKLIYDWASLLASSEGADFTITTSEGSDLQVHSFVMLVR
CPKLYQEVRSAGKKVTWTDICFEGAYVFLSYIYTGTCKIKAKDDSLWMDVFDLALKYECD
DLVTYLESLYKAHPSPVKVATAVNSKDSMVNTDVGIMLTPKMANSQEEGIIKKRFRRCID
LSPGKSISVSSDKGNDDLTTEPVLQPSDSSELMVMSSNPEKDDGKGSSQSPDLFNESCVN
ENTTHKTFPSVSIPMLSELHHSPWDKALQDVHEEPSLSLSTESKTSKPVSYAKSDYFKSN
KQDISSSASPDFSKMKPVTDAGNLREQSEGQNLRGNEEVEDMDVNDSQEDEETDIIDLTV
CSSGSSRSVGTKADTLITPGVHVDAPTDSESEYMEPLMLADGTDTNSEENENCPEEPCMA
AVNIMQATPNKSLDTDYNKQEESKNRSYISNVWDDFDDMGCELLPIEVSPTTPVKAVVAP
AVKGHYHDKEFQVSYDNDSVSPIQSISPTKVADEGVIQNRKWTPVKQTSKTVDCEGTKDR
PIFDMESKLGSSATDAVVASGSSFSDETLLRVAAEFEDSNIWKDDFDSIDDVSDPLLKKD
AEKKLPKSKKDLLKTPNDKIGPSKKSVTPMPDYKNMPSPDLKKELEKYGIRPISRRKATI
LLQHVYEQTHPLVTDSEAESSFCETPQRKPPEKNKKSVSSLHQKVMAKKGTLTKNKKERP
NNKKEASSQPLSSLSAKQGSYEEGDEDFDQLNSSQTSNTSTDGSEFDCAEESMMVGIGDD
DDVLTSTQQVDIGRKVAKFIKCDPELYMKILLYEPIFVEDLQASLKANGIKTNMNNLLEI
LDEQCITFRTQQGQRNRSRKRKSPKKKTAASPTKSPKKNS
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctagtagaggaggtcgcttgtctcgaaagagaaaaaaagaagaagattgcctg
acatttaccagcatacatgatatcactgacgacttccaggaagcagccactgtgttcaga
gttccaaagaaagcaaaaacagaaaagcctccacctgctccaaggcaacgaggccgtccc
aagaaatctagcagtgtgagacagaatttgcaaacagccaatacgacgagtggaaacagc
tccaaaaatgaggattcaagtccagagatcttggatgaggctgatgagtttgaggctgaa
gcaaaacccaaagacataaacttggaaaaagacactgaggcacagcagcttggagaagat
gaggagttcctggaattagagcagtcagtgtgctctgaatctgaaaagctgtgtccatct
tgtaaacatattgttccttctgccctcataggtgatcacataaaagaatgcatgcaaaaa
ttcaaactagtaagaagaaggtctgagagaaattcagcgtctacaaaatctaaagctaaa
gaggaagatattgaagatgatgaagttcttccatgtccaggtttttcaaagtccattgag
aggatcctccaaaacccacctgcaaaaccggaagtcagagaaaagacaaaaagttctgca
acaactgaggaggccaagaatagacgtgaggctataaagactgctaaaaatgccaagaat
gatcctgacctggctatggctttggctctctcacgctcaatggttgaagatgaggcagaa
aagagggcatctagggaagaaaaactcttggaattaggactggatgatattgttgaggaa
gacaggaaagtacagcctctgttgttgcctcttcaatctgcttctggaaaaagtcagtca
tcaaaagggcctgccaaagggaaaggaaaaaagcgtaatgctgtgtggcgtaatacggtc
ctccttaatcgctctaaagaggaaagagaaaatatcatcagtgaaaaggtggctgctctt
ttagcctcagaggacacacagagaaatgagtggacaggaccagggaacggctgcaggaat
gaaccattgttgaggtataaagacaagagttgcagcctttgggaagcagctcatagtcat
gttgaccagccattgcgtgaattttatgtgcctgatctggaaccttacatagaacccaaa
aaggttgctgttggaggattattgagaagactctcacagattcctggtcgactgaatttg
acagctatggatgagaactcagattcagacagtgatgaagagggaggcagaagctatgca
gtggaccgagacagtacgcaatctgtcctggcggaactccttggatcccaagattgtcta
gatataacacgggcacataatgcaattgaggctgaagatttatcaaagtttcaggagttt
gaagatgctgcagcagacccaaatgttactatggaagctgctagtgggttctgggtgttc
aggctaccaggggaaagttctgaagataatgtagaaggagacaaagaaaccattgaagaa
aaggatgagggaaatgagagagactccagtgatgcagtattagtgactgggagtgcatgt
gacagtgacgagagccacattgataagggcgtcagtgacggtgttaaagatgaccaagca
gatgaggataattctttatcatcagaaactaaaactgaggaaatggaagtggataatatg
cagaaaagcaagtctgtggcttttagtactattgatttagttgatagtgcatctatggaa
ttttgtgtagttgatgataaaatggtgatgaattctttggaaaaaagtgataaagacaag
cttgtaaacacattttgtgatttagaggatgatacctcttgtgatacttcagaaaataca
ctgcttgaggatgtgagatctgaaaaagaggttagtaaacaggtaccaacaaactgtgat
gatatagaacccactgaaagtgatggaagtgaggattgtgaaatttctattattttagat
actagctctggaagggctgagtgcaataaggataagttacacgaatctcatcatgaggtt
gaggttagtagcgttagtcctaaatataaagactcttcaagtaaagaacaagaagtgaat
gatttggagccagctaaagatttctttgacaatgattcaaactctagcatgaactctgct
gagacacagatatttactgaaaaccaagactctagctttaatgcaagtttcaggcagcgt
ctacacacagaggagactatcctttactcagattccactgacctttctttagtaacaagt
agttatggagactgccaaaagagaaaacaggaatcagaacatttgaacagggatgaggaa
gggagagtggctgatagttacaagaccagagacaaagtaggaacctcaacggaaaccaga
atttcctcagatttacaagccaggggaagcaacatcagacaaggcaaagatggaaaggga
gaacaggagtgcaaagaaaagtattcagacaaatcagaacctagatctccagaccccctg
catgctaaacttatttatgactgggcttcattgttagccagtagtgagggagctgatttc
actataaccacatcagaaggcagtgatctccaggtgcactcctttgttatgcttgtaagg
tgtccaaaactgtatcaggaagttcggagtgcagggaaaaaggtcacttggacggatatt
tgttttgaaggagcatatgtctttctctcatatatttatactggaacctgcaaaattaag
gcaaaggatgactcgttatggatggatgtttttgatcttgccctaaaatatgagtgtgat
gatcttgttacatatttagaatctttgtataaagctcatccatctccagttaaagtagca
acagcggtaaattcaaaagatagcatggttaatacagatgtaggcataatgctaacacct
aagatggctaattctcaagaggaaggaattattaaaaaaagattcagaaggtgcatagat
ctctcgccagggaaaagcatatcagtttccagtgataaaggaaatgatgatctaacaaca
gagcctgtgctgcaacccagtgactcctcagagttgatggtaatgagtagtaatccagaa
aaggatgatggaaaaggcagctctcagtccccagatctctttaatgaatcttgtgtaaat
gaaaatacaactcataaaacttttccatctgtttcaataccaatgctcagtgaacttcat
cattctccatgggataaagctttacaggatgtccatgaagagccaagtttgagtctcagt
acagagtcaaaaacttcaaaacctgtttcctatgctaaatcagattacttcaagagcaat
aagcaagacatatcatcttcagcttctccagattttagtaaaatgaaaccggtgactgat
gcagggaatttaagagaacaaagtgagggccaaaatttgagaggaaatgaagaagtggaa
gacatggatgtaaatgactcccaagaagatgaagagactgatataattgatctgacagta
tgcagttcaggaagttctcggtcagttggtaccaaggctgatactctgattacaccaggt
gttcatgttgatgctcccacagattcagaatcagaatatatggagccattaatgctggct
gatggaacggatacaaattcagaagaaaatgaaaactgtcctgaagagccatgtatggct
gcagtaaatatcatgcaagcaacaccaaataagagccttgacacagattataataaacaa
gaagagagcaagaatagatcttacatcagtaatgtatgggatgactttgatgatatggga
tgtgagttattgcccattgaggtttctcctacaaccccagttaaagcagtggttgctcca
gctgttaaaggacattaccatgataaagaatttcaggtatcctatgataatgacagtgtt
tccccaattcagagtatttccccaacaaaagtagcagatgaaggtgtaattcagaataga
aaatggactcctgtgaagcaaacttccaaaacagttgattgtgaaggtacaaaagacaga
cccattttcgatatggagagcaaactgggaagtagtgcaactgatgctgttgtagcttca
ggatcatctttctctgatgagactttattgagagtagcagcagagtttgaggatagtaat
atatggaaagacgactttgactcaatcgatgatgtctccgatcctttacttaagaaagat
gcagaaaaaaaattaccaaaatctaagaaagatcttttaaaaacgccaaatgataagatt
ggtccgagtaaaaagtcggtaacaccaatgccagactacaaaaacatgccctctcctgat
ttaaagaaagaactagagaagtatggaatccgtcctataagtcgccggaaagccacaata
ctcctccagcatgtttatgaacagacccatcctctggttacagatagcgaggcagagtct
agtttttgtgaaacaccacagcggaaaccacctgagaaaaacaagaaaagtgtatcatca
cttcaccaaaaggtcatggcaaagaagggaacacttacaaagaacaagaaagagagacca
aataacaaaaaggaagcaagttcacagccactgtcaagtttgtctgcaaaacaaggaagt
tacgaggaaggggacgaagattttgatcaactaaattcttcacagacatccaacacaagt
actgatggatcagaatttgactgtgctgaagaatcaatgatggtgggcattggtgacgat
gatgatgtattaacgtctactcagcaagttgatattggcaggaaagtcgcaaaattcatt
aagtgtgatccagaactgtatatgaaaatactattgtatgaacccatctttgttgaggat
ttacaagcatcactaaaagcaaatgggatcaaaacaaatatgaataatcttcttgaaatt
ctagatgaacagtgcatcaccttccgaactcagcaaggacaaaggaacagatcaaggaaa
agaaaatcacccaagaaaaagactgcagcttccccaaccaagtcaccaaaaaagaattct
taa
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integrated database retrieval system
