Penaeus vannamei (Pacific white shrimp): 113809719
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Entry
113809719 CDS
T06111
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvm03016
]
113809719
Enzymes [BR:
pvm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
113809719
Transfer RNA biogenesis [BR:
pvm03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
113809719
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GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Motif
Other DBs
NCBI-GeneID:
113809719
NCBI-ProteinID:
XP_027217189
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Position
35:complement(21769479..21779878)
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AA seq
452 aa
AA seq
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MLKTETHLLLPLWPNSFLSYSYSAMFTGKPKREFVRTCNFYVLKKKRYCRMLVRPGLNYC
GQHLVEEPDADKSYQRKRIPCPLDPKHSCFEDNVEHHVLKCNARELTDLPYMKRNINQRA
DMEEEPTKTPLSNLSDQELLAFIAKVEKIHQDHVGTIEESVLSHSALDEEMKTPGYGLSV
IRHLGQNSSLLGHLEQCGLLDTKSKPTCYVEFGAGRGQLTHWLTEAVTDTKKAMFVLVDR
GSQRYKFDAKLKYREELSLCRIRVDIQHLDLSNIEGIESYSHIVGVGKHLCGGATDLTLY
CLSKLRDPAVSGLAFALCCHHRCTWTSYVGINFLQECGFSPEEFYTLTSLTSWATCNSRD
VGSKEEKEVSGEKELLSNADMEGNHKDKQTVENRYTRLNLSAQYREEVGRKAKQILDYGR
VKFLQDCGFRSRLVQYVTKDMTLENIALVAEA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagactgaaacccatttgctgctaccactatggccaaacagtttcttatcatat
tcatattcagccatgttcacaggaaagccaaaacgagaattcgtccgaacatgcaatttt
tatgtcttgaagaagaaaagatattgccgcatgttagtaagaccaggcctgaattattgt
ggtcaacaccttgttgaagaacctgatgcagataaatcctaccaacgcaagagaatacct
tgtcctcttgacccaaaacactcttgctttgaagacaatgtagaacatcatgtactaaaa
tgcaatgcaagagaattgacagaccttccatacatgaagcgcaacataaatcaaagagct
gacatggaggaagaaccaacgaaaactccattatcaaacctctcagaccaagaattactg
gctttcatagccaaggtggaaaaaattcatcaagatcatgttggaacaatagaagaatca
gtattaagccatagtgcactggatgaggagatgaagacaccagggtatggtttgagtgtg
atcagacacctaggccagaactcatcattgcttggacacctggagcagtgtggtttgctg
gatacaaaatccaaacccacttgttatgttgaatttggtgctggtagagggcaacttacc
cattggttgactgaagctgtaactgacaccaagaaggccatgtttgtgcttgtggacaga
gggagtcagagatacaaatttgatgctaaactgaagtatagagaggaattatcactgtgt
cgaattagggttgatatacagcatcttgatcttagtaatatcgaaggaatagaatcttac
agtcacattgttggtgttggcaagcacttgtgtggaggtgcaactgacctgacgttatac
tgtctgtcaaagttgcgtgacccagctgtttctggtttggctttcgctctgtgttgccat
caccgatgtacctggacatcatatgtaggcattaacttcttacaggaatgtggcttctcc
cctgaagagttctacaccttaacatccctcacaagttgggcgacatgtaactcacgtgat
gttggaagtaaggaagaaaaagaagtcagtggagagaaagaacttttgtctaatgctgat
atggaaggcaaccacaaagacaaacaaacagtggagaaccgctacaccagattgaatctg
tcagcccaatatagagaggaagttggaaggaaagctaaacagatactcgattatggtcgt
gtcaaattcttacaagactgtggatttaggagccgattagtccaatatgttacaaaagac
atgactctagaaaacattgcacttgtagcagaagcttaa
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