Penaeus vannamei (Pacific white shrimp): 113810067
Help
Entry
113810067 CDS
T06111
Name
(RefSeq) DDB1- and CUL4-associated factor 12 homolog
KO
K11803
DDB1- and CUL4-associated factor 12
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113810067
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113810067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_DCAF12
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_WDR75_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
113810067
NCBI-ProteinID:
XP_069998279
LinkDB
All DBs
Position
29:complement(4589913..4595751)
Genome browser
AA seq
495 aa
AA seq
DB search
MATTHTVRTVGSIPSKYVQRKRMRMRPTSVGCHRVALIHGDPEHKIDEFMLYSDEDEEEE
DNDAEEEENSRDGGGYIALGGVPHHPSHHHHTVRRKQSFMQKYQPLSHNFADYVLTRSRG
CSRHEYQSINEEFGTRHMLTTGMFRERPIPLNRINKVFCSQWLSDHQIAMGTKCNKLMVY
DVNTRQMDVIPSLRSSEPHRPQDQQCGIHSIEINPSRTLLATGALNSNDIAVYRLPTLDP
VCVGEKAHSDWIFDMCWLDDQFLVSGSRDTRLALWKIDDDIDMSNSSNLPNYGHIKPVKI
KKCNGAEKVRAVIFNPNFVEIVALSLNAYLHVWDANRFVQKMSRKLPHAMENVCLTVKED
SSLYAIGSKSHTTLLDPRTLHYVKKVNARITGCGIRSVSFHGDILTIGTGVGAIMFYDMR
AGRYMESTMNSGRAVVLKSTKGWVSADEPYHDVFHNVEYTPAIYTHCYDWSGMRLFAAGG
PLPASLKGNYAALWC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacacacacagtgcgaactgtgggcagcataccctccaaatatgtgcagagg
aagcgaatgagaatgcgacctacaagcgtgggatgtcatcgagtggctcttatccatgga
gacccagagcacaagattgatgagtttatgctgtacagtgatgaggatgaggaagaggag
gataacgacgcagaagaggaagagaactcaagggatggaggaggatatattgccttaggg
ggtgtccctcaccatccttcacaccaccaccacacagtgcggcggaaacagtcttttatg
cagaagtaccaacccttgagccacaactttgctgattatgtcctaacaagatctcggggc
tgcagccgacatgagtatcaaagtatcaatgaggagtttggcacaaggcacatgctaacc
acaggcatgtttcgagagagacccattccactcaacaggataaacaaggttttttgctct
cagtggctgagtgaccaccagatcgctatggggaccaagtgtaacaagttgatggtgtat
gacgtgaacacacgccagatggatgtgattccttcactgcggagctcagagccccaccgt
ccgcaggatcagcagtgtgggatccactctattgaaatcaatccctcacgtaccctcctg
gctacgggtgcacttaactctaatgacattgccgtctaccgactaccaacacttgatcca
gtctgtgtgggtgaaaaggcccactcagactggatcttcgacatgtgctggctagatgac
caatttctagtgtcaggctcaagggacacacggcttgccctttggaagattgatgatgac
attgatatgagcaactcaagcaaccttcccaactatggccacatcaaacctgtcaagatc
aagaagtgtaatggtgcagagaaggtgcgagcggtcatcttcaaccccaactttgtagag
atcgtagcactctcacttaatgcctacctccatgtatgggatgccaaccgctttgtacag
aaaatgtcccgcaagctcccacatgctatggagaatgtttgcctgaccgtcaaagaggac
agttcactctatgcaattgggtccaagtcccacaccacgctgttagaccctagaacactg
cattacgttaaaaaggtgaatgccagaatcacaggttgtggtatccggtctgtgagtttc
cacggtgacattctgaccattggtactggtgtgggtgccatcatgttctacgatatgcga
gccgggaggtacatggagtccaccatgaatagtggccgagcagtggtcctgaagagcacg
aagggttgggtaagcgcagacgaaccctaccacgacgtatttcataatgtggaatacaca
ccagcgatatacacacactgttatgattggtcgggcatgaggttgtttgcggcaggtggc
cctctgcctgcctccctcaagggcaactatgctgctctttggtgctaa
DBGET
integrated database retrieval system
