Penaeus vannamei (Pacific white shrimp): 113810228
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Entry
113810228 CDS
T06111
Symbol
sip3
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04120
Ubiquitin mediated proteolysis
pvm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113810228 (sip3)
04120 Ubiquitin mediated proteolysis
113810228 (sip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113810228 (sip3)
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113810228 (sip3)
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113810228 (sip3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING-like
zf-ANAPC11
zinc_ribbon_16
Prok-RING_4
FeoB_C
FANCL_C
zf-C3HC4_4
FancD2
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
113810228
NCBI-ProteinID:
XP_027217742
LinkDB
All DBs
Position
20:7063799..7077443
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AA seq
660 aa
AA seq
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MPAPMPVGALTMASFALTAAVIGNAYYQKKQFYPSVVYITKSNPSMAAIYLLAFTMVILL
GKLLKKVFFGALRAAEFEHLIERSFYAVTETCLAFTVFRDDFSPKFVALFTVLLFLKTFH
WLADYRVDFMERSPVITLLFHVRVTCLLLLLSLLDLVLVNHAYHSTITRGASVQLVFGFE
YAILLTVALNIGVKYVCHTVDLQSENPWENKAMYLLYTELCMGFVKVVLYAVFMIIMIRI
HTFPLFIIRPMYLTMRSFKRALNDVILSRRAIRNMNTLYPDATPEELRAVDNVCIICREE
MLTGAKKLPCGHIFHASCLRSWFQRQQTCPTCRMDILRQPPPAQGGAAGAAAAARNAQQP
PTPPAQPQTPQPQQQQRQAQQQMPNPFAGLFAGMPMPVGPPPVGLPPFPFPPMPMHQAQQ
QQAAAASASASTTEAGTSSSTTTTSTSTSSSASSTGQAGGAIPTAPFNMLPPLFPLLPFN
IPPPPPPLNFAAMTEDEVRQLEGNERQHVEARIKVLRNIQTLLDAAVVQMNQYASVVASL
DMNSQSIPRNATPQQAGATESASAREPSSSQAAEPMVGAAADRANSRDPDSLKEATSVTS
NDEAARSEVTSSTSVAASPSSLSSTTTTSASADTSTPDELHPDSPQEIRRRRLERFTQNT
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcctatgcccgtaggagcgctgacgatggcgtcctttgccctcactgctgct
gtaataggaaatgcatactatcagaagaaacagttttatccttcggttgtttatatcaca
aaatccaaccccagtatggcagcaatatacctcttagccttcacaatggttatactgcta
ggaaaactactgaagaaagtattctttggtgcactccgtgcagctgagtttgagcacctt
attgagcgatccttttatgctgtcacggagacctgcctcgcctttactgtttttcgcgac
gacttctcccccaagtttgtagcactgtttacagtgctgctgttccttaagacattccac
tggctggcggactacagggtagacttcatggaacgctcaccagtcatcaccctgctcttc
catgttcgggtcacatgtttgctactcctcctgagcctcctagatctagtgctggtaaac
cacgcatatcactcaaccataacacgaggggcatctgttcagctggtgtttggctttgag
tatgcaattctccttaccgtggctctaaacattggagttaaatatgtgtgtcacacagtt
gatttgcagtcagagaacccatgggagaataaggctatgtatctgttgtatacagaactt
tgtatgggatttgtcaaggttgttttgtatgctgtgttcatgatcatcatgataagaata
catactttcccactgttcatcataagacccatgtacctgaccatgaggtcattcaaacga
gccctgaacgatgtgattctttcccgccgtgccattcgcaacatgaatacactataccct
gatgccaccccagaggaactaagagctgtggataacgtttgcatcatctgtagggaggaa
atgctaacaggagccaagaaacttccctgtggccacatattccatgcctcttgcctccgc
tcatggttccagcgtcagcagacctgccctacttgccgcatggacatcctgagacagccc
cctcctgctcaaggtggtgcagctggtgctgcagcagctgcccggaatgcccagcaaccc
cccaccccacctgctcagccacagacacctcagccacagcagcaacagcgtcaagctcag
cagcagatgcccaatccatttgctggcctctttgcgggaatgcctatgccagttggccct
cctcctgtaggtctgccccccttcccatttcctcctatgcctatgcatcaggctcagcaa
cagcaagcagctgctgcctcagcttctgcatccacaacagaagcaggaacaagttcctct
accactacaacctctacgagcacatcatcctcagcaagcagcacaggccaggctggagga
gccatccccactgctccattcaacatgctgcctccactcttccctctcctgcccttcaac
attcctccaccacctcctccattaaattttgccgccatgacagaggatgaggtccgccag
ctggaaggcaacgaaaggcaacatgtcgaggccaggatcaaggtcttgaggaacatccag
actcttcttgatgcagctgttgttcagatgaaccagtatgcatcagttgttgcatcgcta
gacatgaacagtcagtccataccaaggaatgctacaccgcaacaggcaggagcaacagag
tctgcatcagcacgggagcctagttcgtcacaggcagcagagcctatggtgggtgcagca
gcagacagagcaaactcaagagacccagattccttaaaggaggcaacttcagtaacctct
aatgatgaagcagccagaagtgaagtgacatcgtcaacctctgtagctgccagtccgtct
tccttgtccagtaccaccacaacttcagcctctgcagacacctcaaccccagatgaattg
caccctgacagcccacaggaaatccggaggcggcgtctagagaggttcacccagaacact
tag
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