Penaeus vannamei (Pacific white shrimp): 113810629
Help
Entry
113810629 CDS
T06111
Name
(RefSeq) S1 RNA-binding domain-containing protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_7
HHH_9
YqgF
PAT1
HHH
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
113810629
NCBI-ProteinID:
XP_069979456
LinkDB
All DBs
Position
1:43420547..43442492
Genome browser
AA seq
952 aa
AA seq
DB search
MSTNNALEDSIVILEEVEGTRPLAGGTGIELEVLYDGQAEEVQHVPQPQPPQQQSKAQPS
RPPLRQQPQRQRRPVQQYQQQQQEQQQQAAQQRLQRQQQRQQQQRQQQQQRAQQRQAQQQ
QQKQQQQQQQQQQAQQRGVKRKDSEVQVVGQTKAQKTGRGEVGGAGTLKYRKRIPDNDVE
IVFEWDPAKVIAERQSVDEWVARNVISMFDQENTLPFIARYRKERTGNMEVEKLREIQNA
YSQLKHVQERVLKILKGDRKRLPEDRKASLLRATTMHEVEHLTAAYKGSGKRTYAERARE
LGLEPAALEVMQGTHNKFSNRQELYSLMDLNKEGLRTIEEVEQGLQHIIADVISKDPQVL
DCVRQLMKLCKPVLECNKARKQMKRDQGKMVSRGPGPSDDLCAKYENYFEYKNLAWNTKP
HSMLAMNRGEHQGVLSVKVAIPDNTYVHFFNYCQQKWLGMAPPHYYRTQLVMMSIEDSWE
RLVKPFMQRQIRSELTEMAEIASVEVFAANLRKLLLTPPVRGKTVLAIDPGYANGCKIGV
TSPTGEKLLTTTIYPFRGNQHLQVEDWCKDHNARTLREIVHKYRCELFAIGNGTGCRETE
TYLTRLIAQKCFDPYNVQYTIINETGASQYSVSPEARTEFPGLDPNHISALSLARRLQDP
LLEYIKVHPMHMGVGMYQHDIPERILHASLDSVMTECVSFVGVDINSASEFVLRKLSGLN
KPRAANIVEYRKTKGPFINREQLKSVKGIGPRTFEQCAGFIRIMPETLEMEINKTPQGKK
RAEKEAVSPLDRTMIHPESYGAAMKFLSIVGVRSQDIGADHFIRTVRHFMPTTTLDALSE
QCETTLPTMQLIVEGLTQPLDYDIRAQFEKPLFRKGITSIDDVALGTKLTGTVRNVTHFG
AFVDVGLGNDGLVHVTKMAGVRLELGNIVEVSVISIEKERGRIGLMLERLIG
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaacaacgccttagaagactcaatagtgattctggaggaggtggagggaacg
agacctttggctggtggaacaggcattgaactcgaggtgttgtatgatggccaagcagaa
gaagtgcagcatgtgcctcagccccagccacctcagcagcaatcaaaagcacagccatcc
cgtcctccactccggcagcagccacaaagacagcgacggccagtgcaacagtaccagcag
caacaacaagaacagcagcagcaagcagctcagcaaagacttcagcgacagcagcagcgg
caacagcagcagagacagcagcagcaacagagagctcagcaacggcaggctcagcagcag
cagcagaagcaacagcaacaacagcagcaacagcagcaagcacaacaaagaggagtgaag
cggaaggacagtgaggttcaagttgtgggccaaacaaaggctcagaaaacaggtcgaggg
gaggttggaggagctggtactctcaagtacaggaaaaggatccctgataatgatgttgag
atcgtcttcgagtgggacccagcaaaggttattgctgagcgtcagagtgtcgatgaatgg
gtagctcgtaatgtcataagtatgtttgaccaagaaaacaccttgccatttatcgcacgg
tacaggaaagagagaactgggaatatggaggttgagaaacttagagagattcaaaatgca
tactcacagctcaagcatgtacaagagcgagttttaaagatcctgaaaggagatcgcaag
cgtctaccagaagaccgtaaagcctccctgttgagggcaactaccatgcatgaagtggag
catctgacagcagcctacaaagggagtgggaagcgcacatatgcagagagagctcgagaa
cttggtctggagccagctgcactcgaggttatgcagggaacacataataaattttcaaat
cgccaggagttgtattctcttatggatctgaataaagaaggtctacggacaattgaggaa
gttgagcaggggctccagcacattatagcagatgtcataagtaaagatccccaagtcctt
gactgtgtacgacaactcatgaaattgtgtaaaccagttttagaatgcaataaagcacgc
aagcagatgaaacgcgaccagggtaaaatggtcagtcgtggaccaggccccagtgatgat
ctttgtgccaaatatgaaaattattttgaatataagaacctggcttggaacacaaaacca
cattcgatgctggccatgaatcgcggtgaacaccagggagttctttccgtaaaggttgcc
ataccggacaatacatatgtccatttcttcaactactgtcagcaaaaatggttagggatg
gcaccaccacactactacaggacacagctggttatgatgagcattgaagacagctgggag
aggcttgtcaaaccgttcatgcagaggcagatccgcagtgaattaacagagatggctgag
attgcatctgtggaggtgtttgctgccaacttgcggaagcttctcctaacccccccagtg
agagggaagacggtgcttgccattgacccaggatatgccaatggatgtaagattggtgtg
acaagcccaacaggagagaaactcctcactacaacaatctaccctttccgtggcaaccag
caccttcaagtggaggactggtgcaaagaccacaatgccagaacccttcgggagattgtg
cacaaatataggtgcgagctgtttgcaattggtaatggaacaggatgcagagagacagag
acttatctcacacgcctcatcgctcaaaagtgctttgatccgtataatgtccagtatacc
atcatcaatgaaacaggagcatcacagtattcagtctccccagaggcacgaactgagttt
cctggcctggaccccaatcatatcagtgccctgtcattagccaggagattacaagaccca
ttattggagtacatcaaggtgcatccaatgcacatgggagtgggcatgtaccagcatgac
ataccagaacgcatcctgcatgcttctctagattcagtcatgacagagtgtgtgtcattt
gtgggcgttgatattaattcagcttcagaatttgttttaaggaaactctctggactgaac
aaaccaagagcagctaatattgtggagtacagaaagacaaaagggccctttataaacaga
gaacagctgaagtccgtgaagggtattggacccaggacatttgaacagtgtgcaggtttc
atcaggatcatgccagaaacactggaaatggaaattaacaaaacaccgcagggaaagaag
cgagcagaaaaggaagctgtgagcccgcttgaccgcacgatgatccatcctgagtcgtat
ggggctgctatgaagttcctcagtattgtgggtgtacgatcacaagatattggtgctgat
cacttcatccgtactgtaagacattttatgccaactacaactttagatgccttgtctgag
cagtgtgagacaacactcccaactatgcagctcattgttgagggtctgacacagcctctc
gactatgatattcgtgcccaatttgagaaaccacttttccgtaaggggattacctccata
gatgatgttgctttaggaactaaattaacaggcacagtgagaaatgtgacccactttggt
gcgtttgtggacgttggcttagggaatgacggcttggtccacgtcaccaagatggctggg
gtgaggctggagcttggcaacattgtggaggtgtcagtcatctccattgagaaggagcgt
ggtaggattggcctcatgctagagcggttgattggttga
DBGET
integrated database retrieval system
