Penaeus vannamei (Pacific white shrimp): 113810817
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Entry
113810817 CDS
T06111
Symbol
NetA
Name
(RefSeq) netrin-1
KO
K06843
netrin 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113810817 (NetA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113810817 (NetA)
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Axon guidance molecules
113810817 (NetA)
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Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
F5_F8_type_C
DUF7630
Motif
Other DBs
NCBI-GeneID:
113810817
NCBI-ProteinID:
XP_069988030
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Position
17:11714680..12250567
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AA seq
612 aa
AA seq
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MVLCRHVVVVAVAMAIAGRLSAAAGGGYLKMFEAQHNPPDPCYDDAGARPKKCIPDFINA
AFGRSVEASSTCGAPPSRYCVTSHEKGEVNRKCHVCDAEEPARAHPAHYLTDLNNPNNLT
CWRSAPVDPLKPENVSLNISLGKKYELTYISLQFCGQKPDSLAIYKSMDYGRTWHPFQFY
SSQCRKVYGRQSRLVIGKANEQEALCTDAHLSHNDPLTGSSSSRIAFSTLEGRPSAYDFD
SSPVLQDWVTATDIKVVLNRLHPELDEATADNESAAQERYSYAVADLAVGGRCKCNGHAS
QCIPDKTTGALVCDCAHNTAGRDCEKCKPFHFDRPWGRATSREANECVACDCNLHARRCR
FNMELYKLSGRVSGGVCLKCRHNTAGRHCHYCKEGFYRDSTKPITHRKACKACDCHPVGA
SGKTCNQTTGQCPCKDGVIGIMCNRCAKGYQQSRSPIAPCVKVPEPATIRPSGGGSEYTG
QSCGKCRVNSRRLKLRKYCRRDYALVARVINKEVLGEYTRFDIQVTNVYKRSRAVRVRRG
GDQLWVRNQDLVCKCPKIKMGKEYLILGRTDRKQRPGLVIDRRSIVIEWRNDWQLRMRRF
MKKAAKCRPSRY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgtgcaggcacgtggtcgtggtggcggtggcgatggcgatagcggggcgcctc
agcgcggctgcaggtggtggctacctcaagatgtttgaggctcagcacaacccgcccgac
ccgtgctacgacgacgcgggcgcgcggcccaagaagtgcattcccgacttcatcaacgcg
gccttcgggcgttccgtcgaggcctccagcacgtgcggggcgccgccgtcgcggtactgc
gtgacctcgcacgaaaagggcgaggttaaccgcaagtgccacgtgtgcgacgccgaggag
cccgcccgcgcccaccccgcccactacctcaccgacctcaacaaccccaacaacctcacc
tgctggcgctcggcccccgtcgaccccctcaagcccgagaatgtgtcgctcaacatctcg
ctgggaaagaagtacgagctcacctacatcagtctgcagttctgcggccagaagcccgac
tcactggccatctacaagtccatggactacgggcgcacgtggcacccgttccagttctac
tcgtcgcagtgccgcaaggtgtacgggcgccagagccgcctggtgatcgggaaggccaac
gagcaggaggcgctgtgcacggacgcccacctcagtcacaacgaccctctgaccggctcg
tcctcgtccaggatcgccttcagcacactggaaggacgaccctcggcctacgacttcgac
tcctcgccggtcttgcaggactgggtcaccgccacggacatcaaagtggttctgaaccgc
ctgcaccccgagctcgacgaggccacggccgacaacgaaagtgccgcccaggagcgctat
agttacgccgtggccgacctggctgttggcggccgttgcaaatgcaatggtcacgcctcc
cagtgcatcccggacaagaccacgggcgcgctagtgtgtgactgcgcccacaacaccgcc
gggcgagactgcgaaaagtgcaaacccttccacttcgaccgaccgtggggacgcgccacg
tcccgagaggccaacgagtgtgtagcatgtgattgcaacttgcacgctcggcgatgcagg
ttcaacatggagttgtacaagttgtcggggcgagttagtggcggcgtgtgtctcaagtgc
agacacaacacggcggggcgacactgccactactgcaaagagggattctacagggactcc
accaagcccatcacacaccggaaagcttgcaaagcctgcgactgccaccccgtcggcgcc
tcggggaagacgtgcaaccagacgacggggcaatgcccgtgcaaggacggcgtcatcggc
atcatgtgcaaccgctgcgccaagggctaccagcagagccgctcgcccatcgcgccctgc
gtcaaagttcccgaacccgccaccatcagaccctctggcggtggaagtgagtatacaggc
caatcgtgtggcaagtgtcgtgtcaactcccgcagactcaaactgaggaaatactgtcgc
agagactacgctctggtggctcgcgtgatcaacaaggaggtcctcggcgagtacacccgc
ttcgacatccaggtgaccaacgtgtacaagcggtcccgcgccgtcagggtgaggcgcggc
ggcgaccagctgtgggtgaggaaccaggacctggtgtgcaagtgccccaagatcaagatg
ggcaaggaatacttgatccttgggcgaacagaccgcaagcagcggccaggtctcgtcatc
gacagaaggtccatcgtcatagagtggcgcaacgactggcagctgcgcatgcgccgcttc
atgaagaaggcagcgaagtgccgaccgtcgaggtactga
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