Penaeus vannamei (Pacific white shrimp): 113810842
Help
Entry
113810842 CDS
T06111
Symbol
SmD1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113810842 (SmD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113810842 (SmD1)
03032 DNA replication proteins [BR:
pvm03032
]
113810842 (SmD1)
Spliceosome [BR:
pvm03041
]
Complex A
U1 snRNP components
Sm proteins
113810842 (SmD1)
U2 snRNP components
113810842 (SmD1)
Complex B
U1 snRNP components
113810842 (SmD1)
U4/U6.U5 tri-snRNP components
113810842 (SmD1)
Complex C
U2 snRNP components
113810842 (SmD1)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113810842 (SmD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
Hfq
SM-ATX
API5
Motif
Other DBs
NCBI-GeneID:
113810842
NCBI-ProteinID:
XP_027218288
LinkDB
All DBs
Position
12:10784551..10786365
Genome browser
AA seq
125 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVQGTITGVDVAMNTHLKSVKMTLKNHEPVSYDTLTI
RGNNIRYFILPESLPLENLLIDDGPRARRGRSERGRGPGGRGRGRGGRGRGRGGPRGRGR
GGPRR
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagttcgatttctgatgaaactcagtcatgaaacagtgacaattgaacttaaa
aatggcacacaagtccaaggcaccattacaggtgtggatgtagccatgaacacacacctc
aaaagtgtgaaaatgactctaaagaaccatgaacctgtcagctatgacacacttactatc
agaggaaacaacattcgttacttcattttgcctgagtctttgcctcttgaaaacttgctc
attgatgatgggcccagagccagaaggggcagatcagaacgtggacgtggaccaggaggt
cgtggacgaggacgtggtggacgtggacgtggtcgaggaggaccccgtggcagaggccga
ggaggaccacgccgttag
DBGET
integrated database retrieval system
