Penaeus vannamei (Pacific white shrimp): 113810940
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Entry
113810940 CDS
T06111
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K20053
very low-density lipoprotein receptor
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113810940
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113810940
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Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
EGF_CA
cEGF
EGF
EGF_3
DUF5818
Motif
Other DBs
NCBI-GeneID:
113810940
NCBI-ProteinID:
XP_027218398
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Position
2:complement(837999..846244)
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AA seq
859 aa
AA seq
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MVAKHKMKILLLTLSASASLATLVCRESEFSCDGSRCIPRKWLCDGDPDCTDGTDELTTN
CPAKASDGGRTCRASEFQCGNGNCIPQTWKCDGQDDCRDNTDEESCEKTCRDTQFQCVSD
KQCITKKWRCDNQKDCQDGSDEENCEEEVATVPPHMFRCASGITIPTRWLCDGEEDCTEG
SDEKNCPGGEANKPQEKSDPCRDNEFQCGAYCVMATWVCDGGVDCPNGEDEANCDKECPE
SHFTCNNKQCILGHLRCNGEKECADGSDESDCPKVPAVTDAPKVECNLTSHFLCSLNKCI
HRRNLCNGRNDCGDWQDESEEECGVNECERNNGGCTHLCVDSRESYHCECRTGYRLVGKY
TCEDIDECLEVPGTCSQQCTNTNGGYHCSCLPGYERDPGNYTRCKASTGEPYLLFSHRYD
IRSLRLRDNDMTSVVSDAREATALDYLFTGHQIIWSDNKENQIIRANITTPEEREVLVTG
EQVSADGLAVDWIHNHIYYTDTGNFKIRLVSWDAKWSKTIVQEELGQPRAIVVSPLDGYV
FWTDWGMSPKIERAGLDGEGRTAIVTAPHVYWPNGITIDLPNNDLYWCDGKLNTISKARL
DGTQIEVVLFSPSVLRLPYSITVFEDRLYWTDWSQLALYSANKFNGEDIHNVSAGHLLES
PKVVHVFHEYRQPSGENVCDGHTCSHLCIRSPMGMAKCMCPDGLLLSTRDSISCLEGELP
DIMEPSSEPVNPMIPVLPSDFDYSNEEIIPLETNKYEKIQTLEGSNFSVIFAVGVGSAVV
LAIVVMVLVGLWRKRVAAEVPHMRFPNPVYRKTTDEEMDGGGYIIGHDDLLFKPQAVQYS
EGPDIPEGDSDDTPLAPKK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggttgcaaaacacaaaatgaaaatactactcttaactctctcagcttcggcttcgttg
gcgactttggtgtgtcgagaaagtgaattctcctgcgatgggtcgcgctgcatacccagg
aagtggctctgcgacggcgaccccgactgtaccgatggaacggatgaattgacgacgaac
tgcccggccaaagcgagcgacggtggacggacgtgtcgagcctcggaattccagtgcggg
aacggcaactgcatccctcagacgtggaagtgcgacggccaggacgactgcagagataac
acggacgaggaaagctgcgaaaagacctgtagagacacgcagttccagtgtgtgagtgac
aagcaatgcattacgaagaagtggcgttgtgacaaccagaaagattgccaagatggctca
gacgaggaaaattgtgaagaggaagtagcgactgtcccgccacacatgttccggtgcgcg
tccggcataacgattcccacgcgctggctgtgcgacggggaggaggactgcacggaggga
tcggacgaaaagaactgcccaggcggggaagcaaataagccccaggaaaaatcggatcct
tgccgtgacaatgaattccagtgcggagcttactgcgtcatggcgacctgggtgtgtgat
ggaggcgtcgactgccccaacggcgaagacgaggcaaactgcgacaaagaatgcccagaa
tcacacttcacatgcaacaacaagcagtgcattctcgggcacttgcgatgcaacggggag
aaagaatgtgccgatggttccgacgaatccgattgccccaaagtaccggcagtcacggac
gccccgaaagtggaatgcaatctgacgtcgcacttcctgtgttcactcaacaagtgcatc
caccgcaggaatctttgcaacggcaggaatgactgtggtgactggcaggatgagtcggag
gaggaatgcggcgtgaatgagtgcgagagaaacaacggcggctgcacccacttgtgcgtc
gactccagggagagttaccactgcgagtgtaggacggggtatcgcctggtcggaaagtac
acgtgtgaagatattgacgagtgcctcgaggtcccaggaacgtgctcccagcagtgcacc
aacaccaacggaggttaccactgttcttgcctccccggttacgagcgcgaccctggcaac
tacacccgctgcaaggcctcgacaggagagccctacctcctcttctctcacagatacgac
atcagaagccttcgtcttcgcgataatgatatgacttcagttgtgagtgatgcgagagaa
gcgacagcactcgattacctgttcactggacaccaaatcatctggtcagataacaaggag
aatcagatcattagggctaatattactactccagaggagagggaagttcttgttacgggt
gaacaagtctctgcagatgggttggctgttgactggattcacaatcacatttattacact
gatacaggcaactttaaaatccgcctcgtgtcctgggacgccaagtggtcgaagacaatt
gtacaggaagaattgggacaaccaagggccattgtagttagtcccttagatggatacgta
ttttggaccgactggggaatgtctcccaagatcgagagagctggtctggatggagagggt
cgcacagccatcgtgacagcccctcatgtgtattggccaaacggtattacaattgacctg
ccaaacaatgacctatattggtgtgatggaaagctgaacaccattagcaaggccagacta
gatggaacccaaattgaggtggttttgttttcaccaagtgtcttgaggctaccctattcc
attaccgtgtttgaggaccgactttactggacggactggtcacagcttgccctatacagt
gccaataaatttaatggagaagatattcacaatgtttcagctggacacttgcttgagtca
cccaaagtggtacacgttttccacgaatatcgccagcctagtggagaaaatgtatgtgac
ggccacacttgtagtcacctgtgtatccggagtcccatgggtatggcgaagtgcatgtgt
cccgatgggttgttactttccacaagggactcaatttcctgccttgaaggtgaacttcca
gatataatggaaccaagcagtgaaccagtgaatcctatgattcctgtcttaccatcagac
tttgactacagtaatgaagaaatcattcccttggaaacaaacaaatatgaaaaaatccaa
accctggaaggatctaactttagcgtgatcttcgcagtaggagttgggtctgctgtggtg
ttggccattgttgtcatggttcttgtaggtttgtggagaaaacgtgtagcagctgaagta
ccccacatgcgtttcccaaatcctgtttaccgcaagactactgacgaagaaatggacggt
ggtggttacattattggccatgatgacctactatttaaaccccaagctgtacagtattca
gaagggccagatattcctgaaggagattcggatgacactccacttgctccaaagaagtaa
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