Penaeus vannamei (Pacific white shrimp): 113811154
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Entry
113811154 CDS
T06111
Name
(RefSeq) RNA-binding protein 5 isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113811154
Spliceosome [BR:
pvm03041
]
Complex A
Other components
Complex A specific factors
113811154
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OCRE
G-patch
RRM_1
G-patch_2
DUF7066
Zn_ribbon_RanBP
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
113811154
NCBI-ProteinID:
XP_027218626
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All DBs
Position
3:561407..573296
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AA seq
1009 aa
AA seq
DB search
MEVNIALVYGRDRNGDTNLQGQGLGLTEMINAMAAQQHMYTAAAAYGSLEAAAYAQYPQY
VAQVSREKLSAEHGISFREACPHAPFLAHPPPQGAYIAPAPAPGGGRGHGHGHGHGHGHG
RSAIDPYDGYAAPAYEPDPPRHRDRRDREDRRRDRDRDRDRDRRDRDRDRRDRDRDRDRD
RDRDRDRDRDRDRDRDRWRDDDRDRSPRRDRDHRDYRDYDRDRDNYEDERTDYKSQPPNN
TIMVRGLAQHITENDIRADILACNLMPKDIRLVRKKESGASRGFAFVEFTTVHDATRWME
AKQGVLILQDVYRATLQYSIPKESSERQSKASQDWFCIRCGAHNFKRRDSCFKCSAPRHE
SEAGEEGSDEVCTYPTNTLLLRGLDVLSTEESVLQGIQHVGSDLPIRSVRIGRDPLTNTS
RGVCYIELNSVLDSMQLHNKLAHAPPTIDGKQVTISYCKLNPNNGNGNNWSAQQQQQQQY
HQPAEYTAGADIKQLAEYSASLYAQTPEEHASYVQYYTMYYQQQAQAYQQNQQQQGSSNQ
SDSVNAAAAVAQSALQAMQQKSAANTSTSGAAAVAAAASQSTYSTPTTTAPTTTDQTVTQ
TTPGSANYDGVQLQTGEYPTYPPPDVSTYQYDETSGYYYDPSTTLYYDASSQYYYNAESG
QYLYWDAEKSTYLPAPVGEDGHEGKKGDKKEKEKDKQDKVKVAKKIAKDMERWAKAQNKR
NESAITGKAATAEPAGGSREGSGTGAADAAFAVLLERRDRASLVEKQSQVFQMHMKKDSA
PVLASMKKSGLVAAYGGEGSDSEEETGAGLGGMGGEERLEEKLVDYTKMACLLCKRQFPN
KEALGRHVQLSDLHKTNLEAMRKSRGSGDGAGGLGGMTAAQYRDRAKERRQKYGEPSVPA
PNKLKERYMAAREEVEATKYEEPTKQGIGSDNIGNKLLKKMGWTDGQGLGKANQGRTSII
ETERRVATAGLGMQGSTYSVVGDSYKDCVKKMMFHRYQELDAQEKSVKS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaacattgccctcgtttatgggagggaccgaaatggagatacaaatctccaa
gggcagggacttggcctcacagagatgattaatgccatggccgcccaacaacacatgtac
accgcagctgcggcgtacggcagtctagaggctgccgcctatgcgcaatatccgcagtat
gttgcgcaggtcagcagagaaaaattatcagctgaacatggcataagttttagagaagct
tgtcctcatgcaccttttcttgctcatccccctccccagggagcatacatagccccagcc
ccagcaccaggaggtgggcgtgggcatgggcatggtcacgggcatgggcatggccatggt
cggagtgccatcgacccgtatgatggctatgcagccccagcctatgagccagatccaccc
aggcatcgtgaccggcgtgacagagaggatcgccgtagagacagggacagggaccgtgac
cgggacaggagggacagagacagggatcgcagggatagagacagggatcgggaccgcgac
agggacagagatagagacagagacagggatcgtgatagggatcgcgaccgctggagggat
gatgatcgcgaccgcagccctcgcagggacagagatcaccgggactacagggactacgac
agggacagagataattatgaagatgaaaggacagattataagtcgcagccacctaacaac
actatcatggtcaggggacttgcacaacacatcacagagaatgatatccgggcagacatc
ctagcatgcaacctaatgccaaaggatatccgcctcgtcaggaaaaaggagtcaggtgca
tcaagaggctttgccttcgtggagtttacgacggtacatgacgccacacggtggatggaa
gccaaacagggtgtacttatcctgcaagatgtgtacagagcaactttgcagtattccatc
cccaaggaatcctccgagcggcaatctaaagcatcacaagactggttttgtatcaggtgt
ggtgctcataacttcaagcgtcgtgattcctgcttcaaatgctcggccccacggcacgag
tctgaagctggtgaagaaggcagtgacgaagtgtgtacctacccaaccaatactttgctc
ctgcgcggactagatgtccttagtacagaagagagcgttctccaaggcatccagcatgtg
ggaagtgacctgcccataagatctgtccgaatagggagggaccccctcaccaacacttct
cgaggggtgtgctacattgagctaaattccgtcttagactcgatgcagttgcacaataag
cttgctcatgcacctcccactattgatggcaagcaggtcaccatatcctactgcaaactg
aacccaaataatggcaatggtaacaactggtcagcacagcagcagcaacagcagcagtac
catcagcctgcagagtacactgcaggtgctgacatcaaacagcttgcagagtacagtgcc
tctttgtatgcccaaaccccagaggagcatgcgtcctatgtccagtattacaccatgtac
taccaacaacaggcacaggcttatcagcaaaatcaacaacaacaaggcagttcaaatcag
tcagattcagtcaatgctgcagcggcggttgcacagtctgcccttcaagctatgcagcaa
aagtcagcagcaaacacctcaacaagcggtgcagcagcagttgcagcagcagcatcacag
agtacttacagcactcctaccacaactgcaccaacaaccactgaccagacagtgacacaa
actacacctggttctgccaattatgatggagttcagctacaaacgggagaatatcctact
taccctccccctgatgtcagcacataccagtatgatgaaacctcaggttactattatgat
ccttccaccacgctgtactatgatgccagcagccaatactactacaatgctgagagtggc
cagtatctctattgggatgcagagaagtcaacttacctcccagctcctgttggggaggat
ggccatgaggggaagaagggggataagaaagagaaggagaaagataagcaggacaaggtt
aaagttgccaagaagattgcaaaagatatggaaagatgggccaaggctcagaataagagg
aatgaaagtgccataacagggaaggctgccacagctgaacctgctggaggctcccgagaa
ggaagtggaacgggagctgctgatgctgcctttgccgtgcttttggaaagaagagaccgt
gcttcacttgtcgagaagcaatctcaggtcttccagatgcacatgaagaaggattctgca
ccagttctggcaagcatgaagaaatcaggccttgtcgcagcatatggaggagagggcagt
gacagtgaagaggagactggagctggcctagggggtatgggtggagaggagagactggaa
gagaaactagtcgactacactaaaatggcatgtctactgtgcaagagacagttccccaac
aaagaggctctgggcagacacgttcagctctcagacctgcacaaaaccaacctggaagcc
atgaggaagtcaagagggtcgggtgatggtgcaggtggactaggaggaatgactgcggcc
cagtacagagacagagccaaggagaggcggcagaagtatggcgagccaagtgtacctgca
cccaacaaactcaaggaacgttacatggccgcccgggaagaggtcgaggctaccaagtat
gaagagccaaccaaacaaggcattggcagtgacaacatcggaaacaagctattgaagaag
atgggctggactgatgggcaggggctgggcaaggcgaatcagggccggacgtccatcatt
gagactgagagaagggtggccactgctggcctcgggatgcagggcagcacctacagcgtg
gtcggggacagctacaaggattgcgtcaagaagatgatgttccaccggtaccaggagctc
gatgcccaagagaaatctgtcaagagctga
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