Penaeus vannamei (Pacific white shrimp): 113811180
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Entry
113811180 CDS
T06111
Symbol
Rbbp5
Name
(RefSeq) retinoblastoma-binding protein 5 homolog
KO
K14961
COMPASS component SWD1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvm03036
]
113811180 (Rbbp5)
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
113811180 (Rbbp5)
COMPASS/SET1 complex (yeast)
113811180 (Rbbp5)
MLL-HCF complex
113811180 (Rbbp5)
MLL3/MLL4 complex
113811180 (Rbbp5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_WDR11_1st
Beta-prop_NUP159_NUP214
Frtz
WDR54
Motif
Other DBs
NCBI-GeneID:
113811180
NCBI-ProteinID:
XP_027218661
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Position
43:complement(5109208..5121413)
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AA seq
490 aa
AA seq
DB search
MNLELLESFGQNYPEEFDGALDCASLAGTCAFNRRGTLLAVGCNDGRIVIWDFLTRGIAK
VISAHVHPVCSLSWSRGGYKLLSVSTDNNVCIWDVLSGECDIKYRFPSPVMKAQFHPRND
KIFLVCPMRHPAVLVNVDASHKIVPMDDEGDVNIVASFDRRGEYIYTGNSRGKLLILSCP
ELEVKTSFRIGQGTTSAAAIKSIEFARRTEFFLVNSADRVIRVYDAKKVLRCGKDDDPEP
IQKLQDLVNKTMWKKCCFSGDGEYICAGSARQHSLYIWERSVGNLVKILHGTKGEMLLDV
VWHPVRPILASISSGVVSVWSQNQVENWSAFAPDFKELDENVEYEERESEFDQSDEDKSV
EMSQEKKEEDIEVDVTAIEPVAAFCSSDEEDDSSTLLYLPISPEIEEPEEGWGPEGAPNE
DLNSKRSGDSKENVSPKKKRPKTFDVSLENAPTDEVHPLASNRPKDKQMAGNKKGRNNSK
GDSKKDRKKH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgagctcttagagtcgtttggccagaattacccagaggagtttgatggggcc
ttggactgcgcatcactagctggtacttgtgcttttaatagacgaggcactctgctagct
gtgggttgcaatgatggccgaattgttatatgggatttcttgacccgcggcattgcaaag
gtcatcagcgctcatgttcatccagtttgttctttaagttggtcaagaggcggctacaag
ctactgagtgtttctaccgacaataatgtctgcatatgggacgtcctgagtggggagtgt
gatatcaaatacagatttccctcgcctgttatgaaggcccaatttcatcctcgtaatgac
aagattttcctagtttgccccatgagacatccggcagtgcttgtcaatgttgatgcctcg
cacaaaattgttccaatggacgatgagggagatgtcaacattgttgcctccttcgaccgt
cggggagagtacatatacacaggcaacagcagagggaagctgctcatcctctcttgccca
gagttggaggtcaaaacgtcattcaggattggccaaggaaccacaagtgcggctgccatc
aagagtattgaatttgcgcgcagaacagagtttttccttgtgaattccgcagaccgtgtc
attcgtgtttatgatgcaaagaaagtcctgaggtgtggcaaagatgacgatccggaacct
atacagaaattacaggatttagttaacaaaaccatgtggaagaaatgctgcttctcggga
gatggcgaatatatctgtgcaggctccgctagacagcactccctgtacatatgggaacgc
agcgtgggaaacctggttaagatcttgcacggcactaagggagaaatgcttcttgatgtt
gtgtggcatccagtgcgaccaatcttggcctccatcagctctggggtggtatctgtgtgg
tcgcagaaccaggtggaaaactggtcagcctttgcccctgacttcaaggagctcgatgag
aatgtagagtatgaggagagggagtcagaattcgaccagagcgacgaggacaaaagcgtt
gagatgagccaggaaaagaaggaagaggatattgaggtggatgtcacagcgatagaacca
gtagcagccttttgcagctcagatgaggaagatgacagcagcaccctcctgtacctccca
atctcaccggagatcgaagagcccgaggaaggttggggaccagagggggcacctaatgag
gacctaaacagtaagcgctcgggtgacagcaaggagaacgtatccccgaagaagaagaga
cccaagaccttcgacgtttccctagagaatgcacccacagatgaagtacaccccttggca
agcaacagaccgaaggacaagcaaatggcagggaataagaagggaagaaataactcaaaa
ggagactccaagaaggatagaaaaaaacattag
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