Penaeus vannamei (Pacific white shrimp): 113811338 Help Entry 113811338         CDS       T06111                                  Symbol tho2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism pvm  Penaeus vannamei (Pacific white shrimp) Pathway pvm03013   Nucleocytoplasmic transport pvm03040   Spliceosome Brite KEGG Orthology (KO) [BR:pvm00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     113811338 (tho2)   09122 Translation    03013 Nucleocytoplasmic transport     113811338 (tho2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvm03019]     113811338 (tho2)    03041 Spliceosome [BR:pvm03041]     113811338 (tho2) Messenger RNA biogenesis [BR:pvm03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      113811338 (tho2) Spliceosome [BR:pvm03041]  Complex C   Other components    EJC/TREX     113811338 (tho2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     113811338 (tho2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  113811338 NCBI-ProteinID:  XP_069989591 LinkDB All DBs Position 2:complement(44194006..44255674) Genome browser AA seq 1483 aa AA seqDB search MAGSHRLFTLETWKNWAKSGKAEVIQTIKQLLKEDSDNPGLSQPSVCKDLSRGLYEILSA VLRGSLTREHVRPLLAEMLNWHPDLASQLVEVATLLDLEASTIDRLSRNREQLMMLLKSL DIDKMMKERLEIETLGDYGIVKNKKNFHTKQIKVKTKLFYKQQKFNLLREETEGYAKLVT ELNQEITERVTPQSIIQVIRSLIGGFNLDPNRVLDLILESLEARPSQHQFYTGLLNQYPC ESATISELLGFKLNNYASNGKDTKGIYTTIALLIQANILQLSDIYSWLTPEDSSMIECHL KEENEAKEIVRKLNVISTKDKDKDKEKEQERQEEESLKEDFKNQEVYLSNQKIQLCIALI EVGAWEHFVEISSRFPDYYLMSFPPVSQALCQLVHATIEPIYREVCNLPSRLKASRVKPL DNPLAPQPARKFSDVSATVFPMLLVLGPHLYHDPGLMCKVLRVARVALKETPVGEDGERS NFYFEFLSVLDEVLLPSLSMLDSNPCLAEEIWETLKIYPYQHRYRLYGRWKNESFTQHPM LMRRRAWLLKKAKFIMMRITKETIKPVSRGIGKLTHNNPGPIFHYILIQVQLYDNLIGPV VDSFKYLTSLSYDMLGYCIVEILSENKDRTAHEEMIISPWLQSLSSFCGTVFKKYVTDLG GILQFVANQLKSEKSIDLLILREIVQKMGGTDTLEDLTAEQLSAMCGGELLRREAGQYQQ ERNTKRSSLRLKEALLENDLAIPLLLLMAQQRSSIVYNQTESPHLKLVGKLYDQCQDTMV QFGSYLFQVVTIEELSDRLPSIGSLLSDYHINADVAFFLARPLFINMLNSRYDELRRQDR GEKKLTIEQKKDRYIQACNEVFDPIVSSIQPHFSIKVWEDMDPSFFLTFWTLTMSDLEVP HHMYEKEIKKIDANVSPSANKRKKETDRLLALKEKLQEEEKRQKEHVDRVYARLQQEKDG WFMLRGARSPKNDTVTAFLQLCLFPRCTFTALDAIYCAKFVKMLHNLKTPNFSTLICYDR MYCDITYTVASCTEQEAHRYGRFLLGTLDTVMHWHASQQNYEKECANYPGFVTKYRVSRQ EANDYVDYENYRHVVHKWHYKITKALVTCLESGDYIQIRNAILILQGILQRFPVISNLAA VIEKRIEKVKNEERNRRNDLYVLANSYSGRLKGAKPNLMPETDFHIVPKRPQAAKVVNGA SEKSSSTAANDVKSSGEMVEQNEKIVKMETSETTNGELEGKEDREAKDIKKESASKVAKE KKEASEKRKSEDREIKKEEKEKKDKEKKEEREEKPKKRNKESKKSKYDDEDYADPERDDR ALVGGGAERERESSVTSNASSASNKMEPPESSRGSKRRKTEHNSKSRKEEGSRREHKHKE RSKSKEPEGETQTKESKKEKKERKRDRSQDDAVDSDLKRKKDDRIKSNGRSEDDHKHRHQ THRADSEEYHDRYSSDVRGKDYREYEYDREYEKHPPSRHKRKN NT seq 4452 nt NT seq  +upstreamnt  +downstreamnt atggcgggcagtcaccgcttgtttacactcgagacttggaaaaattgggcaaaatcgggc aaagcagaagtcatccaaacaatcaaacagttattaaaagaagactcagataaccctggc ttatcccagccaagtgtttgcaaagacctgtccagaggactgtatgagattttgtcagct gttttaagaggcagcttgacacgtgaacatgtgcgaccacttctcgcagaaatgcttaac tggcacccagatctggcttcacagctggtggaggtggctacccttcttgacctggaagct tccaccattgaccgcctcagcagaaatcgggaacagctaatgatgctgctcaagtcctta gacatcgataaaatgatgaaggagaggttggagattgaaactctcggagattatggcata gtgaaaaacaagaaaaatttccacacaaagcagataaaagtgaagactaagttattctac aaacagcagaaattcaacctattacgagaagaaacagaaggttatgctaagcttgtgaca gagctcaatcaagaaataacagagagggttacacctcagtcaatcatccaagttattcgt agtcttatcggtggtttcaacttggaccccaatcgtgtcttagacctcatcttggagtcc ttggaggcacggccatcccagcaccagttctacacaggactcctcaatcagtacccctgt gagtcagctaccatcagtgaactcttgggcttcaagctcaacaattacgcctccaatgga aaggacaccaaggggatctacaccacgatagcactcctcattcaggccaacatcctgcag ctttccgatatctactcatggctgacacccgaggactcctccatgattgagtgccatctg aaggaggagaacgaggcgaaggagattgtcagaaagcttaatgtcatatctaccaaagac aaggataaagacaaggaaaaggaacaagagcggcaagaggaggagagtctcaaagaggat ttcaaaaatcaggaggtgtatctgtccaatcaaaagatccagttgtgcattgccctcatt gaggttggagcttgggagcattttgtagaaatttcatctcgtttccctgactattatttg atgtcttttcctcctgtgagtcaagcactttgtcaactagttcatgccacaattgaaccc atctacagagaggtgtgcaatttaccaagccgactcaaggcctctcgagtgaagccacta gacaaccctctggcaccacaaccagccaggaaattcagcgatgtcagtgcaacagtattc ccaatgctgcttgtgcttggaccacacctgtaccatgacccagggctcatgtgcaaggtc ctcagggtggctcgtgttgctctcaaggagacaccagtaggagaagatggtgaacggtcc aatttctactttgagtttttaagtgttttggatgaagttctccttccgtctctctccatg cttgactcaaacccatgtctggcggaggagatttgggaaacactcaagatatatccctat cagcacagatataggttgtatggccgatggaagaatgagtccttcacacagcatcccatg ttgatgaggcgcagggcttggctgctcaagaaagctaagttcattatgatgcgcatcaca aaagaaactatcaagcctgtaagccgaggcattgggaaattgacgcataacaaccctggc cccatattccattatatcctgatccaagttcagctgtatgacaacctaattggccctgtg gtagacagctttaagtacctgacatctctctcctatgacatgctgggatactgcattgtg gaaatcctctcagagaacaaggatagaactgcacatgaagagatgatcatctcaccatgg ctccagtccctgtccagtttttgtggcactgtgtttaagaaatatgtcacagatctcgga ggcatcttacagtttgtggccaaccaactcaagtctgaaaaatccattgatctcctcatc ttacgagaaatagtgcagaaaatgggtggaacagatactttagaagacctcacagctgaa cagttgagtgctatgtgtggtggagaactcctgcgtagggaagcaggacaatatcaacag gaaaggaacaccaagaggtcttctctccgtttgaaggaggctctcctagagaatgacctt gccatacctttgttgctacttatggcacagcagaggtcatctattgtatacaatcagaca gaatcaccccatttaaaacttgtagggaagctgtatgatcaatgccaggatacaatggtg cagtttggttcgtatctgttccaagttgtcactatagaggagcttagcgatcggctgcca agtattggatccttgttgtccgattaccacatcaatgctgatgtagcattcttcctcgca cgtcctctttttataaatatgctaaattccagatatgatgaattaagaaggcaagatcgt ggtgagaagaaactgaccattgaacaaaagaaagatcggtatattcaggcttgcaatgaa gtttttgaccccattgtttccagcatccagccacacttcagtattaaggtctgggaggac atggatccttccttcttcctcactttttggacactcaccatgtccgacctggaggtccca caccacatgtacgagaaagagatcaagaagattgatgcaaatgttagtccatcggcaaac aagcgcaagaaggagactgaccgtctcttggcactgaaggagaagctccaggaagaggaa aaacgtcagaaggagcatgtcgacagagtgtatgccagattgcagcaggaaaaggatgga tggtttatgcttcgaggagcaagatccccaaagaatgacactgtgacagcttttctccaa ctctgcctatttccacgatgcacattcacagcactggatgccatttattgtgccaagttt gtgaagatgctgcacaacctcaagactccaaatttctccaccttgatatgttatgaccgt atgtattgtgatatcacctacaccgttgcatcttgcactgagcaagaggctcaccgatat ggccgcttcctcctggggaccctagatactgtcatgcactggcacgcatcgcagcaaaac tatgagaaggagtgcgcaaactaccctggctttgtcaccaagtaccgggtttcacgccag gaagccaatgattacgtggattatgagaactaccgtcatgttgtccacaagtggcactac aagatcactaaagccttggtaacctgcctagagagtggggactacatccagatccgcaac gccatccttattctgcagggcatcttgcaacgcttccctgtcatttcaaaccttgctgca gtcattgaaaaaaggattgagaaggtgaaaaatgaggagagaaatcggaggaatgaccta tacgtcctggcaaacagctactcagggagactaaaaggtgcaaagcccaacctcatgcct gagacagacttccacattgtcccaaagaggccacaagcggcaaaggttgtgaatggggcc tcagagaagtctagctcaacagcagcaaatgatgtcaagagcagtggggagatggtagag cagaatgaaaagattgtcaagatggagacttcagagactaccaatggagagctggagggc aaggaagacagggaggcgaaggacatcaagaaagagtcagcaagtaaagtggcaaaggag aaaaaagaagcaagtgaaaagagaaagagtgaagacagagagataaagaaggaggaaaag gaaaagaaggacaaggaaaagaaagaggaacgagaagaaaagcccaaaaagaggaacaaa gaatcaaagaaatccaagtatgacgatgaggactatgcagacccagagcgagatgaccgc gcattagtgggaggtggagccgagagggagagggagagcagtgtcacgtccaacgcttct tcagcctctaacaagatggaacctcctgagtcttcaagagggtcaaagcgtcgcaagact gaacataactccaagagccgtaaggaggagggctcccggcgagaacacaagcacaaggaa cggtccaaatcaaaggagcccgagggggagacacagaccaaagagagcaagaaggagaag aaggagaggaagagggaccgatctcaagatgatgcagtggactctgatctgaaacggaag aaggatgatagaataaaaagtaatggcaggtctgaagatgaccacaaacacaggcaccaa acacacagggcggacagtgaggagtatcacgaccgatattcaagcgatgtcagagggaag gattaccgagaatatgaatatgaccgagagtatgagaagcatcccccaagcagacacaag cgcaaaaactaa

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