Penaeus vannamei (Pacific white shrimp): 113811705
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Entry
113811705 CDS
T06111
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03410
Base excision repair
pvm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113811705
03450 Non-homologous end-joining
113811705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113811705
Enzymes [BR:
pvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113811705
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
113811705
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
113811705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DNA_pol_B_palm
HHH_8
BRCT_2
NTP_transf_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
113811705
NCBI-ProteinID:
XP_069988170
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All DBs
Position
17:22442806..22446220
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AA seq
469 aa
AA seq
DB search
MKRKINQASASRKKAKSSSEEDQALKADFLSGLKCFIHPANFGVGRLSIFQKLVKNNGGD
IFDTLPWACERVTHVIFEESLDADKIQKLIDPSQYQNAFFVKCSWLSACSKSKTKIDTKD
FEIKLSTECSKDKNVPSSVEPPKLNSQSTNGVQNAAYEIPISRKERSKDPRITSTIRSIE
QGENLTSNNHEVFSSNREGPLPESSTKCNIKDISLSVKDLQKDTDEKNTSREDDDTSAED
NTREGSFKKRKFLPKELKEKFACARPSGKQVKDFNHHITAELEKLAAAYKSKKDTWRALG
YQKAISAIRNYPRPITSREEALSIRGVGGRLADKVAEIVESGKLRKVAEVCEDEEAQTLQ
RFMGVWGAGPTTAHGWYIQGYRTLEDLREKGNLTRHQQIGLKYYDDINSRIPREEVAEIE
NYVRSAAHGIKKGLIVMVCGSYRRGRATCGDVDVLVTHPDGQSHETVFQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagataaatcaagcctctgcatcaaggaagaaagcaaagtcaagtagtgaa
gaagatcaagcactaaaagcagatttcttatcagggttaaaatgctttattcaccctgca
aacttcggcgtaggtagactcagtatatttcagaaactggtgaagaacaatggtggtgat
atatttgatacattgccatgggcctgtgaaagggttactcatgttatctttgaggaatct
ttggatgctgacaagatccagaagttgattgatccatcacagtatcaaaatgcatttttt
gtaaaatgttcttggttaagtgcatgctctaaatccaaaactaagattgataccaaagat
tttgaaattaaactgtcaacagagtgttcaaaggataagaatgtaccctcttcagttgaa
ccaccaaaattaaacagccagagtacaaatggagtacaaaatgcagcatatgagattccc
atatcaaggaaggaaagaagcaaagaccctcgcattacaagcaccattcggtccatagaa
cagggtgaaaatttaaccagtaataaccatgaagtgttttctagtaacagagaagggcca
ttaccagagagctccacaaaatgtaatatcaaagatattagtctctctgtgaaagatctt
cagaaagatacagatgaaaagaacacaagtagagaagatgatgacacttcagctgaagat
aatactagggaagggagcttcaaaaaaagaaagttcttacccaaagaactaaaggagaaa
tttgcatgtgcaagaccatcaggcaagcaggttaaagatttcaatcaccacattactgca
gagcttgagaagttagctgcagcctacaaaagcaaaaaagacacatggagagcccttgga
tatcagaaagctatttctgccattcgcaactacccaagacctattacatccagagaggag
gccctcagtatccgtggtgtgggaggacgcttagcagacaaagttgcagagattgtagag
agtggtaaactaaggaaagtagctgaagtgtgtgaggatgaagaagctcaaacactgcag
cgcttcatgggtgtctggggagctggaccaaccactgcacatggctggtacattcaagga
tacagaacactggaagatctacgtgagaaagggaatttgactagacaccagcaaattggt
ctcaagtactatgatgatataaatagccgcatccctcgtgaagaagttgcagaaattgaa
aactatgtccggtctgctgcacatggtattaaaaaagggctgattgttatggtgtgtggc
tcatacagacgtggcagagcaacttgtggagatgttgatgtgctggtgactcaccctgat
ggccagtctcatgaaactgtattccag
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