Penaeus vannamei (Pacific white shrimp): 113811847
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Entry
113811847 CDS
T06111
Name
(RefSeq) putative iroquois-class homeodomain protein irx-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113811847
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
113811847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
DUF3246
PGA2
choice_anch_I
Motif
Other DBs
NCBI-GeneID:
113811847
NCBI-ProteinID:
XP_027219498
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Position
3:complement(40599116..40725035)
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AA seq
436 aa
AA seq
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MANVTYTGASSTSPLVVSSSGGSAVGSPCEPRDPPPLPGGMGVGVGGYDLMTYQRLASAL
YAHPPHATLDGATPTSIPPTTPTTLLAAHDPLLHGNGLELKDSLGGIGGGAWPYPMYYPY
DTLAAYPFTHGYGMAFDAARRKNATRETTATLKAWLNEHKKNPYPTKGEKIMLAIITKMT
LTQVSTWFANARRRLKKENKMTWEPRNKTDDDDDDDDDKDDDHNNDVDVGSDVRVGEDGG
SEGSPMRPPSPSSTTGGGEAPPHAAPPPASPVKPRIWSLADMASSSSSSPTSPSSTLAGA
VGKMSVHRPLHLEASPYARPIPMAPRLPSPQEALLQVYAKSLGLASHHAHSFPSLPPGLN
GLGSHLSPPGLEAPLPATLGAPPYSTATLQPPTISKPVATRPLPAVSPSSLPALHHTLPG
GAKITPAPPPAHRPEG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgtcacctacactggggcctcctccacatctcctttggtggtgtcatcgagc
ggtggcagcgccgtgggcagtccctgtgagcctcgcgaccctccccctctaccaggtggc
atgggagtaggcgtgggtggctacgacctcatgacataccaacgtctcgccagcgccctc
tacgcccatccgccccatgcgaccctcgacggagccacgcctacctctataccacccacc
acacccacaacgctactcgccgcccacgacccactattacacggaaatgggttagaacta
aaggatagcctgggtgggatcggtgggggcgcctggccttatccaatgtattatccctac
gacaccctcgccgcttatcccttcactcatgggtacgggatggctttcgacgccgcccgc
aggaaaaacgccacgagggaaacgacggcgacgctgaaggcgtggctgaacgagcacaag
aagaacccttacccgaccaagggcgagaagatcatgctggcgatcatcaccaagatgact
ctgacgcaggtgtcgacgtggttcgccaacgcccgtcgccgcctcaagaaagagaacaag
atgacctgggaacctcggaataaaactgacgacgacgacgacgacgacgacgataaggac
gacgaccacaataacgatgttgacgtgggcagtgatgttcgcgttggagaggacggcggg
agcgagggctctcctatgaggccgccctcgccctccagcaccactggcgggggagaagcg
cccccgcacgctgccccgcccccagcctcacccgtgaagccacgcatctggtctctggcg
gacatggcctcctcctcctcttcttccccgacgtccccgtcgtccaccctggcgggcgcg
gtggggaagatgagcgtccaccggccgttacatcttgaggcgtcgccttacgcccgcccg
atccccatggcaccaaggttgccctcgcctcaggaagctctcttgcaagtctacgccaaa
tccctgggcctggcgtcgcatcacgcccattccttcccgtccctacctcccggcttgaac
gggcttgggtcacacctctccccgccgggcttagaggcgcctctgcctgccactctggga
gctcccccatacagcacagccaccctacagccgcccaccatcagcaaacccgttgctact
cgcccattgccggccgtgtcaccctccagcctcccagcccttcaccacaccctccccggg
ggcgccaagatcacccccgcaccgccccccgcacatcggcccgagggttaa
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