Penaeus vannamei (Pacific white shrimp): 113812565
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Entry
113812565 CDS
T06111
Name
(RefSeq) protein sickie isoform X1
KO
K19483
neuron navigator 2 [EC:
5.6.2.4
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113812565
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113812565
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
Check point factors
Other check point factors
113812565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ubiquitin_6
AAA
ATG16
nSTAND3
AAA_22
PhoH
AAA_16
RNA_helicase
AAA_25
NPHP3_N
AAA_14
IstB_IS21
ResIII
Val_tRNA-synt_C
AAA_18
AAA_5
TsaE
AAA_33
NACHT
AAA_28
AAA_7
AAA_24
PduV-EutP
SRP54
TMF_DNA_bd
EzrA
Fez1
TMF_TATA_bd
DUF2730
Motif
Other DBs
NCBI-GeneID:
113812565
NCBI-ProteinID:
XP_069979685
LinkDB
All DBs
Position
7:19093785..19259261
Genome browser
AA seq
2443 aa
AA seq
DB search
MAPMFCTKLFNWKPKGKKDGGPRPHLDTVFPEPQDEGEACPYWTHVACNPPPPPPSRPHT
PTHARTQPTPPPLPPHHPGSPVHHQPQPRSPATHRRAHARNHLPYGYSSTYNSPYQSPHQ
SPGPNSPVNHSPHHFTPIHHSPAHCSPAHCSPVHPNQGYNSPVHVNQGYNSPVHVNQGYN
SPVHVNQGYNSPIRQSPIHTNQGCNSPAHQSPVHHSSGYNSPVHVNQGYNSPIHPTPVHP
SPVYPSQNYNNTMHHRGYILESNYCQPLPPPPPQRPPPPIPGTEGSQLKTVASASSSRST
SPANGSASFIPQPRSHSGRASLNEKHSKTGGTSNLVKSNLRGPATQTAHNASGNHALASP
YHATSAPPAKQKDSMLDKFKLFNHKEKEARNKTTSKSSSGVSKRTSSSSGFSSARSERSD
SSTSLCSDAKPPPLPPHQSLPVSTSSSSSDQTSHAEAQQGGAPPASTKPQGLRGIRSKFS
KSAGKEGKESPKASRKDKEREEREGSRGSPRGGHKTHRDPRGESRDRSAKKGDKLTLELD
GGSRPQRPQCPLPANAEKDSRPPAPGPRPETAGHAASESDQPPALPPKEKDHKEHSHSSH
QDQAPAMQQQTVVTTPGSPLPPGTPGTGIPKPTAHVKGQTKVVPPERSAPPTPTASPNVN
TSHQAKDYNKMVRPAGTPSTPKIGGSSAPRTAGTPSGGEANAAQECRDPKGSLPRQKQLG
RREDSATGISVAMVSPMPNPREKDMVTPSESGSNISESSQSNSGHSNSTSSGNSSVIYKP
TSSEDDSVSDLKTHMRKVEEKAEGEEGDEVILNIKPMQPLVRASQYGYMRGLGLHQTRTV
PPSLHVSRLAALQDNANTVPQKGMRIGPHLKRPPGPNQVIDTDYSDLESVDLANGYMSDG
DVLRNVGYKSGNSSDLDGYLSEGGASLYAHRLNQRFKEGMRQVHESMNKVQHFIHDDSNG
TENDMEVSSLSPSTTSSEPRHFDEDDYLDRDLSEDKKEGEEEEEDDIFSDECKPRPPPRE
ESGTRRRFDDSSSLSSGVSDTLNEMSAEDVLSSSLSSDHPAYVKQGRSMKEVGLKLPVGL
SGSSSRKVAMGVDPSGVYKVVSSRAHVKKTESAQQTDNSAFKQISNTQWKKYVENGKGSL
ERSARDLQRGIDPSSGSSRKVDHKKSNLGSPQTGVPSSPGLNGSSGVSGSASGGSRKVDK
KGTSGEKRREGERSSRDKSAVAMSPQVNGESKKIQNPKTAPSNFGYNGKRTTSTGSVSST
GSGKGSKSVKEVDSAGGSSSRHDSSSHSLERPRTKLKVSGGTQTTSDLHYMSTGVHSDSE
YSSGSLGRKYQLKSYSLNGPVAAQLSQSVRERIMQSPYGKIHVGEYGQYPPAYYRERSPR
IKPTDGSLSDSPYSNYAEIQYSGSPYSSPYSWVSRSNYAGSVASAPTRPLGGSLTEAESM
ESISSSASSIAAQIQHARATSLTQARLMMHQREMSSSPSPRLARSNSVSHLIERTFPRST
KSEKLYSSSMGGRDGYHASQPTSPTPPGGTRLPISPLNTVRGSPYYSTVIPRTSKDDECH
GSSLSLVSSSSSLYSSQEEKQAAEIRKLRKELAEAQEKVGTLSNQLSTNNSVFNLKNTAH
VVAAFEQSLTNMTNRLQQLTATSEQKDSEVMELRKTIEALRQQSVDAGLTVACLQSTSPG
HHQHHHHHHHSPPSPARHQHTHLSPNIASCSVLNVTSGSRSSSPEKSGHDLARRHTFTGN
CKDLVVCEFTEAGGKLVRGTSVESVSSLSSACSAASHTSMQDKSDGSKSGKKKGWLRSSF
SKAFSRGHKKSKHGVGGGSVSDVEGWERGECSAPSSPLLQRANGGTSDPECQSTTGTFGN
NKEEEVESLKIQLREKDMALTDIRLEALSSAHQLESLKETISKMRSEMVSLKQDNDRLAR
MVSSKSLNSSQSSLPVSDSIEQRLSLGGDEMTMPDSTDVILIDPSDKDGKRVSITVFMGC
HGDYDKYMNPADGVSFSECIIGAISVSGKTKWDMLDNLVKRIFKEYILRVDPVSNLGLSA
ESIFSYHIGEIARGRDADSPELLPCGYLVGEVTNIKITLKGATLNHVDALAFETLIPKSI
VQRYMSLLTEHRRIILCGPSGTGKTYLAQKLAEYLVTRMGKDPSPGYIATFNVDHKTGKD
LGAYLSHISEQCESNTSDLPLVIILDNLHHAGALTDVFNGFLSAKYSHCPYIIGTMNQTT
SCSTTNLQLHHNFRWVLMANHMEPVKGLVGRVARRRLTQVEVEAGSRLPRLQQVLDWLPR
CWSHINKFLETHSSSDVTIGPRLFLSCPGSLEDSQVWFTDLWNYSLVPYLVEAVREGLQL
YGKRATWEDPSTWITETYPWPPSNHAGPQALLSLRPEDVGYDALAPTVAPAAQDKFKSDN
QGENDPLLSMLMRLQEAANYSSPQQDSDTPSLENIENTLESTI
NT seq
7332 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatgttctgcacgaagctgtttaactggaagccgaagggcaagaaggacggg
ggtccccggccgcacttggacaccgtcttccccgagccgcaggacgagggggaagcgtgt
ccctattggacccacgtggcatgcaatcccccgccgcctccgccctcccgcccgcacacg
cccactcacgcccgtacccagccgacgccgccgcccctccccccgcaccaccctggcagc
cctgtgcaccaccagccgcagccccgctccccagccacacaccgccgtgcccacgcccga
aaccaccttccgtatggctacagcagcacctacaacagcccctaccagagcccacaccaa
agcccaggccccaacagcccagtcaaccacagcccacaccactttacccccatccaccac
agccctgcacactgcagccccgcgcactgtagccctgtgcatcctaaccaaggctacaac
agcccagtccacgtgaaccaaggctacaacagcccagtccacgtaaaccaaggctataat
agcccggtccacgtcaaccaaggttacaacagcccgatccgccagagcccgatccacact
aatcaaggatgcaacagcccggcccaccaaagcccagtgcatcacagttccggctacaac
agcccggtccacgtcaaccaaggctacaacagtccgattcaccccaccccggtccacccg
agcccggtgtacccgagccagaactacaacaacacgatgcaccaccgcggctacattctg
gagagcaactactgccagccgctgccgccgcccccgccgcagcgaccgccgcctccgata
ccgggaactgaaggttcccagttgaagaccgtcgcctcggcgagcagcagccgctccacc
tctccggccaacggcagtgcttccttcatcccgcagcccaggagccacagcggccgtgca
tcgctcaacgagaagcactccaaaactggcggcacttcgaacctggtcaagtcgaacctc
cggggccccgccacccagaccgcccacaacgcgtcggggaatcacgccctcgcttcgcct
taccacgccacctccgcgcccccagccaagcagaaggactccatgctggacaagttcaag
ctgttcaaccacaaggagaaggaagcgaggaacaagacaacgagtaagagcagcagcggg
gtgagcaaacgaacgagcagcagcagcggattcagcagcgccaggtccgagcgctctgac
tcgtcgaccagcttgtgttccgacgccaagccccctccgctgccgccgcaccaaagcttg
cctgtgagcaccagtagcagcagcagtgatcagacgagccacgcggaggcgcagcagggg
ggagcgccccccgcctccaccaagccgcagggccttcggggcatcaggtccaagttttcc
aagtctgcgggcaaggagggcaaggagtcgcccaaggcgtcgcgcaaggacaaggagcgc
gaggagcgggaggggtcccgagggtcgccgcggggaggtcacaagacccaccgagaccct
cgcggagagagtcgcgacaggagcgccaaaaagggcgacaagctcacgctcgagttggat
ggcggctcgcgcccccagcgcccccagtgccccctgccagccaatgccgagaaggactcc
cggccccctgcgccgggtccgcggccggagaccgcagggcacgcagcctcagagtcagac
cagccacccgctctaccgcccaaagaaaaggaccacaaggagcacagccacagcagccac
caggatcaggccccagcaatgcagcagcagactgtcgtgacgacccccggcagccccctc
cccccaggcactccaggcacgggcatcccgaagcccacggcccacgtgaagggccagacc
aaggtggtgccccccgagcggtctgcgcccccgacccccaccgcctcgcccaacgtcaac
acgtcccatcaggccaaagactacaacaagatggtccggcccgcaggcacgccctccacg
cctaaaatcggaggcagcagcgctccgcggacggcagggacaccctcgggtggggaggcc
aacgcagctcaagagtgccgcgacccgaagggctctctgccgcgccaaaagcagctgggc
agacgggaggactccgcgacgggcatcagcgtggcgatggtgagtcccatgcccaaccca
cgcgagaaggacatggtcacgccctccgaatcgggctccaacatcagcgagtcctcccag
agcaacagcggccacagcaacagcacttcctccggcaactcctccgttatctacaagccc
acgagttccgaggacgacagcgtctccgacctgaagactcacatgagaaaggtggaggag
aaggccgagggagaagagggcgacgaagtcattctgaatatcaagcccatgcagccgctg
gtgagggcttcgcagtatggctacatgagaggactaggcctccaccaaacccgcacagtg
ccaccttctttgcacgtttccaggctagcagccctccaagacaacgccaacacagtaccg
cagaaggggatgcgtattgggcctcacctcaagcgtcctccgggtcccaaccaggtcatt
gacacggattacagcgacctggagagtgtggacctcgctaatggttacatgtccgacggc
gacgtcctacgcaatgttggctacaaatccggcaattcctcggatcttgacggttacctg
agcgagggcggcgcctccctctacgcccaccgcctcaaccagcgcttcaaggagggcatg
aggcaggtgcacgagagcatgaacaaagtgcaacacttcattcacgacgacagcaacggc
acagaaaacgacatggaggtatcctctctctctccttccaccacgtcgtcagagcctagg
cactttgacgaggacgattatttagacagggatctaagcgaagataaaaaggaaggagag
gaggaagaggaagatgatatatttagcgatgaatgcaagcccaggccgccaccaagagag
gaatcgggcaccaggaggcgcttcgatgacagtagcagcttgagttcgggggtgagcgac
accctcaacgagatgtcggcggaggatgtcctctcctcgtccctgtcctcggaccacccg
gcttacgtcaagcagggtcgtagcatgaaggaggttggcctgaaactcccggtgggtctg
agtgggtcatcgtccaggaaggtagccatgggtgtagatccctctggcgtgtataaagta
gtatccagccgagctcatgtcaagaagacagagagcgcccaacagactgataatagtgcc
tttaaacaaatatcaaacacacagtggaaaaaatatgtagaaaatgggaaaggaagcctt
gaacgttcagccagagatttacagagaggcattgatccatcaagtggaagctcacgtaaa
gtagaccacaaaaagtccaacttgggttctccacaaactggagttcccagcagtccagga
ctaaatggtagttctggggtatctggtagtgcctcaggtggatctaggaaggtggataag
aaaggaaccagtggagaaaagagaagagaaggagagagaagtagcagagacaagtctgct
gttgccatgtctcctcaggtgaatggggaatcaaagaaaattcagaatcccaagactgct
cccagtaactttggatacaatggaaagagaaccactagtactggcagtgtatcaagcact
ggcagtggaaagggtagtaagtctgttaaagaggtagacagtgctggtggcagcagctct
cgtcatgacagctctagtcacagcttggaaagaccaagaaccaaacttaaggtgtctgga
ggcacacaaaccaccagcgaccttcattatatgtctacaggagtccatagtgatagcgag
tattcatcaggttctcttggcagaaagtaccaactcaagtcctattctttaaatggtcca
gttgctgctcagctgtcacagagcgtgcgggaaagaatcatgcagtctccttatggcaaa
attcatgtaggagaatatggacagtatcctcctgcatattatcgggaacgaagtcctcgc
atcaaacccacagatggctcattaagcgattctccatattccaattatgcagagatacag
tatagtggaagtccatatagtagcccctattcctgggtatccagaagtaattatgcagga
tcagtggcttctgcaccaacaagacccctgggtggcagtctgacagaggcagagagcatg
gagagtataagctcaagcgcctcgagtatagctgcacagatccagcacgctcgagccacc
agcctcacacaagcccgcctcatgatgcaccaacgggaaatgtcctcatcaccctcccct
aggctcgctcgctccaatagtgttagccatcttattgaacggaccttccctagatctaca
aagtctgagaaactgtacagtagtagtatgggaggtcgagatggctaccatgcctcacag
cctaccagtccaacaccaccaggaggcaccaggctacctatatctcccttgaacactgtt
cgaggctccccatattattcaactgtgatccctagaacttcaaaggatgatgaatgtcat
ggatcttcattatcattggtgtcctcctcatcatcactgtacagctcacaggaggaaaag
caagctgcagagattaggaagctgaggaaagaattggctgaagcacaagagaaagttgga
actctgagtaaccaacttagtactaataactcagttttcaacctgaagaatacggcccat
gtagttgctgcctttgagcaatctctcaccaacatgacaaacagattgcaacagcttaca
gcaacatcagagcaaaaggattcggaggtcatggagttgcgtaaaaccattgaggccctg
cgtcaacaaagtgtagacgctggtcttaccgtagcctgtctccaaagtacgtcccccggc
caccaccagcaccaccaccaccaccaccactcccccccttcccctgccaggcaccaacac
acccatctctctcccaacattgcctcgtgttctgtgctcaatgtcacctcaggcagtcgt
tccagttcaccagaaaaatcagggcatgaccttgcgcgcaggcacaccttcacggggaat
tgtaaagaccttgtagtgtgtgaattcactgaagctggtggtaaactagtacgaggaaca
tcagtggagtctgtgtcaagtctgtcctctgcatgctcagctgcatcacacacatccatg
caagataaaagtgatggatcaaagtctggaaagaagaaaggttggctacgaagctcattt
agcaaagccttctcccgagggcacaagaagagcaaacatggcgttggtggagggtcagtc
tctgatgtggaaggctgggaacgaggagaatgttctgctccttcatctcctctcctccag
cgagcaaatggtggaacaagtgacccagagtgtcagtccacaactggaacctttggtaac
aacaaggaagaggaagtggagtcactgaagattcagttgcgagaaaaagacatggctctt
accgacattcgacttgaagccttatcttcagctcaccagctggaatccctcaaggaaacc
ataagcaaaatgcgctctgaaatggtgtcgctaaagcaagacaatgatagactggcgagg
atggtatcctcaaagtccttgaactcctcacagagttcgcttcctgtgtcagattcaata
gaacaaagattaagtcttggtggtgatgaaatgacaatgccagactcaacagatgtgatt
ttaattgaccctagtgataaggatggaaaacgagtcagtattactgtcttcatgggatgc
catggagattatgataaatatatgaatccagctgatggtgtgtcatttagtgagtgtatt
attggagctatatctgtaagtgggaaaaccaagtgggatatgttagacaatcttgtgaaa
cgcatttttaaggaatacatcctgagagtcgaccccgtctccaacctgggacttagtgct
gagtctattttctcataccacattggagagattgccaggggacgtgatgcagactcaccg
gagttactcccttgtggatatttagtgggagaagtgacaaacatcaagattactctcaaa
ggagccactttgaatcatgtggatgctcttgcatttgaaactttgattccaaagtccatt
gtccaaagatacatgtctctcttgactgaacaccggaggattattttgtgtggtccttca
ggcacaggaaagacatacttggcccagaagttagcagaatatctagtaactcgaatggga
aaagacccatcacctggttatattgcaaccttcaatgttgaccacaagacaggaaaagac
cttggagcctacctctctcacataagtgaacaatgtgagagtaatacttcagatctgcct
ttggtcatcattttagataacttgcaccatgcaggagccttaactgatgtattcaatggg
ttccttagtgcaaagtacagccattgtccttatattattggaacaatgaaccaaactaca
tcatgttcaacaactaacttacagttgcaccataactttagatgggttttgatggccaat
cacatggagcctgtcaaaggcttagtgggaagagtagctcgaaggagattgacacaggtt
gaagtggaagctggttcaagattaccccggcttcagcaagtgctggattggctcccaaga
tgctggagtcacatcaacaaattcttggagactcattcatcttcagatgttactattggt
cctcgcttgtttttgtcttgtcctggaagtctggaggattcccaggtgtggtttactgac
ctgtggaactattcccttgtgccctaccttgttgaagctgtgagggaaggactccagttg
tatggaaagagagcaacctgggaggatcctagtacctggattaccgaaacttacccgtgg
ccaccaagcaatcatgcaggcccacaggctcttttgtctttgcgccctgaggatgtaggg
tatgatgccctggctcccacagtggctcctgcagcacaggataagttcaagagtgataac
caaggagagaatgatccattgttgagtatgctgatgagactacaagaagctgccaactac
tctagtcctcagcaggactctgatactccttcactagagaacattgaaaacacactggag
tccaccatctaa
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integrated database retrieval system