Penaeus vannamei (Pacific white shrimp): 113812893
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Entry
113812893 CDS
T06111
Name
(RefSeq) transcription factor SOX-4
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113812893
Transcription factors [BR:
pvm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113812893
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113812893
NCBI-ProteinID:
XP_069978773
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All DBs
Position
6:15896852..16006675
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AA seq
430 aa
AA seq
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MLPQSVTDRSTSPTTTQGVIFGSQLVQANSRTPYSDATQTKKHNPNHVKRPMNAFMVWSQ
MERREIVKFAPDMHNAEISKQLGKRWKNLTEDQRQPYIQEAERLRQLHMQEYPDYKYRPR
KKTKSGSSAKAVEKGRVTKAKDKTSSAGSTALKAVKLTADPSRAQFTTGISAINHNKLKL
KLKIDKKFKDSIRNTMYVPISQCTSPAEVPATPHEMPASPESASLYDSHVSTTSSSRSSS
RAASTSPSPGKEPFLYGLYTIESAPGLTSLRPESLVSSTTVTSADDDDDDDDDDHDHDDK
DDDIDTKEDVLLYSRKRHTVRDEVFAPRPFLPSSLSASRAADPPPIKLEPLDIKQEPPSE
STLADLDSLTDLLQMPTDFKVEVDEINSDLDFDAVSTSSGSHFEFSDVSDMLSDIGVSND
CWADIGIINC
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgttgccccaaagcgtaaccgatcgttccacatcgcccaccacaactcagggagtaata
tttggatctcagctcgtccaagccaactccagaactccgtacagcgatgcaacgcagacg
aagaagcacaacccgaaccacgtgaagcggccgatgaacgccttcatggtgtggtcacag
atggagcgccgcgagatcgtcaagttcgcgccggacatgcacaacgccgagatctccaag
cagctggggaagcggtggaagaatctgacggaggaccagcggcagccgtacatccaggag
gcggagcggctgcggcagctgcacatgcaggagtaccccgactataaataccggcctcgc
aagaagacaaagtccggcagcagcgccaaggcggtggagaaggggcgggtcaccaaagcc
aaggacaagacgagcagcgccggcagcaccgccttgaaggccgtcaagctgaccgccgac
ccgtcgcgggcgcagttcaccaccggcatctccgccatcaaccacaacaagctcaagctc
aagctcaaaatcgacaagaagttcaaggactcgatccgcaacaccatgtacgtgcccatc
tcgcagtgcacgtcgccggcggaggtgcccgccacgccccacgagatgcccgcctcgccc
gagagcgcctccctgtacgacagccacgtgagcaccacctcgtccagcaggagcagcagc
cgcgccgcgtccaccagcccttcgccaggcaaggagcccttcctctacggcctctacacc
atcgagagcgcgccggggctcacctcgctgcggcccgagtcgctcgtgtcgtccaccacc
gtcacctcggccgacgacgacgacgacgatgacgacgacgaccacgaccacgacgacaag
gacgacgacatcgacaccaaggaggacgtgttgctgtacagccggaaacgccacacggtc
cgcgacgaggtgttcgccccgcgccccttcctgcccagctccctgtcggcgtcccgcgcc
gccgaccctccgcccatcaagttggagcccctggacatcaagcaggagccgccctcggag
tccaccctggccgacctcgactccctcaccgacctgctgcagatgcccacggacttcaag
gtcgaggtggacgagatcaactcggaccttgacttcgacgccgtgtccacgtcctcgggc
tcccacttcgagttctcggacgtgtcggacatgctgagcgacatcggcgtcagcaacgac
tgctgggccgacatcggcatcatcaactgctga
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