KEGG   Penaeus vannamei (Pacific white shrimp): 113812898
Entry
113812898         CDS       T06111                                 
Name
(RefSeq) splicing factor U2af 38 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113812898
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvm03041]
    113812898
Spliceosome [BR:pvm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    113812898
 Complex B
    113812898
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4
Other DBs
NCBI-GeneID: 113812898
NCBI-ProteinID: XP_027220621
LinkDB
Position
2:complement(42323880..42331183)
AA seq 240 aa
MSMSGAEYLASIYGTEKDKVNCSFYIKTGACRHSERCSRKHNKPQYSQTVVMQNMYVSQQ
NSAKSADGSHLANMSDHEIQEQFEYFFEDVFFECEDKYGEIEEMCVCDNQCDHLRGNVYI
KFRREEDAVKAAEDLNNRWYMFRPIYCDLCPVADFREACCRQFEMGQCGKGGFCNFWHVK
PISHHLKNLLARSSRSRYRYRSRSRSRSRDRHDKHGPEKHRRRSRSRSRDRDRRDRRGRY
NT seq 723 nt   +upstreamnt  +downstreamnt
atgtctatgtcaggggctgaatacttggcctccatctatggcacagagaaggataaggta
aactgctcattttacatcaagactggagcttgccgtcatagtgaaagatgttccagaaaa
cacaacaaaccacagtacagccaaacagtggtgatgcagaacatgtatgtgagccagcag
aactcggccaagtcagctgatggatctcatttggccaacatgagtgaccatgagatccag
gaacagtttgagtatttctttgaggacgtgttcttcgaatgtgaggacaagtatggagaa
attgaggagatgtgcgtgtgcgataatcaatgtgaccacctgagaggcaatgtgtacatc
aagttccggcgggaggaagatgcagttaaggcagcagaggacctcaacaaccgctggtac
atgttccgacctatctactgtgacttgtgtcctgtggctgatttccgtgaggcctgttgc
cgccagtttgaaatgggccaatgtggtaagggtggattctgcaacttctggcatgtcaag
cccatttcgcaccacctcaagaacttgttggcacgttcctccaggtcccgttataggtac
cggtccaggtcacgctccaggtctcgcgacaggcatgacaagcatggccctgagaaacac
aggaggaggtctcgctcacgctctcgtgatcgtgaccgtcgagaccgcagaggcagatat
tga

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