Penaeus vannamei (Pacific white shrimp): 113813765
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Entry
113813765 CDS
T06111
Name
(RefSeq) cartilage oligomeric matrix protein-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04145
Phagosome
pvm04512
ECM-receptor interaction
pvm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113813765
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113813765
09142 Cell motility
04820 Cytoskeleton in muscle cells
113813765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113813765
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvm04147
]
113813765
00536 Glycosaminoglycan binding proteins [BR:
pvm00536
]
113813765
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Phagocytosis
Opsonins
113813765
Exosome [BR:
pvm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113813765
Exosomal proteins of colorectal cancer cells
113813765
Exosomal proteins of bladder cancer cells
113813765
Glycosaminoglycan binding proteins [BR:
pvm00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113813765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
113813765
NCBI-ProteinID:
XP_069986870
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Position
15:complement(40205701..40211985)
Genome browser
AA seq
1082 aa
AA seq
DB search
MMSFMIILGMVAATAVAMPTNVPDCSGEGRFPNPNTCGGFYDCIQDDNGGYELSFDDCNG
FVFNTTSRTCSSEMCLSRSERSVTNAYPRYSYLCEGQPDDFVCADCRTMVMCVKGQAFAR
QCISGRSCSIKAAFGGAVCYPGHPAACTCQSADSFVRDLYDPQKFFSCSGIGVLPEIHVC
PDGMVFDETLVQCRNQASLPACRRPGVFANLDDCSEYYSCISLQSGWLQRLFMCPNGTLF
NEATGACEDPCKRTMVCYEEGRFPDPLDRRSYYECLIIGGLMKRARYQCPHGYVWKANDS
GDGGACVEDHEMNLYDYFTRCSIPQGMCPDETTDPCLANNGGCNANADCLTINGGVSCTC
RAGYSGDGYTCIDVDECAVANGGCSASATCTNSDGSFQCSCSAGYTGDGFTCIDVDECLV
ANGGCGANALCSNTPGSRDCTCKSGFTGDGLVCTDVDECLVANGGCHANADCKNDVGGRT
CTCHPGYTGDGLQCTDTDECLVANGGCDANARCSNTPGSRDCTCKSGFTGDGLVCTDVDE
CLVANGGCHAKAKCTNTAGSRTCSCLAGYTGDGKVCQPLKCPVGYAGEGAECAPDSDLDG
YPDTELSCSSKYCRKDNCVNRPNSGQEDADGDKIGDACDNDADGDGHDNNKDNCPLIANP
GQSDKDKDKRGNKCDNCPDDSNPNQSDIDGDGKGDKCDNDIDNDGLLNGADNCPKVANGN
QADSDGDGIGDACDNCPQHANQGQSDKDEDLLGNACDDDVDTDSDGVEDSVDNCPNVANS
DQQDVDGDGKGDACDTDNDNDGVLDKNDNCELIPNKQQKDTDGDGFGDACSDDKDGDKVL
DPDDNCIYNPNVHSTDFRHLQMVALDPQTASTPPVWVVYDNGAEIHQTVNSDPAIAVGDH
VLGDVDFEGTFFIEDTSDDDFVGFIFGYQSNAKFYVVSWKKAPQNWFNKAERGVTLKLVN
SNTGPGTKLRDALWFTGSTPNQAQLLWHDGSLGWKPKVAYRWLLHHRPDIGTIRFYLYQG
NNQVMDSGNIYDSTLKGGRLGLFCFSQEEIIWSNMEYKCGEGVPQAMFNDLPANLQNQVL
SS
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctttcatgataattcttgggatggtggctgcaactgcagttgccatgcccaca
aatgtgcctgattgttctggtgagggcaggttccccaacccaaatacgtgtggtggattc
tacgactgcatacaagatgacaatgggggctatgaattatcttttgatgactgtaatgga
ttcgtcttcaacactacctccaggacgtgcagcagtgagatgtgtctttcaaggagtgag
cggagtgtgactaatgcatatcccaggtactcttacttgtgtgaaggtcagcctgatgac
tttgtgtgcgccgactgcagaaccatggtcatgtgtgtgaaaggtcaggcctttgcccgc
cagtgcatcagtgggaggtcttgtagtatcaaggcagcctttgggggtgcagtgtgctac
ccaggtcatcctgctgcatgcacctgccagagcgcggactcgtttgtccgcgatctgtat
gacccacagaagttcttcagctgctctggcatcggagtactccccgagatccacgtttgc
cctgatggcatggtgtttgacgagacccttgtgcagtgtcgcaaccaagccagtcttcca
gcttgcagacggcctggtgtctttgcaaaccttgatgactgctctgaatattactcgtgc
atctcgcttcaatctgggtggctgcagaggctgttcatgtgcccaaatggaaccttgttc
aacgaggcaacgggagcttgtgaagatccttgcaagcggacaatggtgtgctatgaggaa
ggcaggttcccagatcccctcgaccgccgtagctactacgaatgcctgattattggtggg
ctgatgaagcgtgcccgctaccagtgcccccatggttatgtgtggaaggctaacgactct
ggtgatggaggagcgtgtgtggaggaccacgagatgaatctgtatgactacttcacccgc
tgtagcattccacaggggatgtgtcctgatgagactacagatccctgtctggcaaacaac
ggcggctgcaatgccaatgcagactgcttaacaattaatggaggtgtgagttgcacttgc
agagcagggtacagtggtgatggatatacatgtatagatgttgatgaatgtgctgtggcc
aacggcggatgttctgcaagtgccacgtgtacaaactctgatggcagtttccagtgcagt
tgctcagcaggatacactggtgacggcttcacctgcattgatgttgacgagtgcttggtt
gccaatggtggatgtggtgctaatgctttgtgtagcaatactccaggcagccgtgactgc
acctgtaaatcagggttcactggggatggcctagtttgcacagacgttgacgagtgtctg
gtggctaatggtggatgccatgctaatgcggactgtaaaaatgatgttggtggcagaact
tgcacatgtcatcctggatacactggtgatggacttcagtgtactgacacggatgaatgt
ttagttgccaacggtggctgtgatgcaaatgcccgttgcagcaatactccaggcagccgt
gactgcacctgtaaatcaggattcactggggatggcctagtttgcacagatgtggatgag
tgtttggtagctaatggtgggtgccatgctaaagctaagtgtacaaacactgctggcagc
agaacttgttcttgccttgctggttatacaggtgatggaaaagtgtgccagcccctcaag
tgccctgttggttatgctggtgaaggtgcagagtgtgctccggactctgaccttgatggc
tacccagacactgaactgagctgttcaagcaagtactgccgtaaggataactgcgtcaat
aggcccaactccggacaagaggatgccgatggtgataagattggcgatgcttgtgataat
gatgctgatggagatggacatgacaataataaggataactgtcccctgatagccaaccct
ggccaaagcgacaaggataaggataaacgtggaaataaatgtgacaactgccctgatgac
tccaaccccaaccaaagcgatattgatggggacggaaaaggcgacaaatgcgacaacgat
attgataatgatggattgctaaatggtgcagacaattgtcctaaggtagctaatggcaac
caagctgacagtgatggagatggtattggagatgcttgcgacaactgccctcagcacgcc
aaccaagggcaaagtgataaggatgaagatctcctagggaatgcctgtgatgatgacgtg
gacactgacagtgatggtgtggaggacagtgtggacaactgtccaaatgtggccaatagt
gaccagcaagacgtagatggtgatggtaaaggtgatgcatgtgatacagacaatgacaat
gatggtgtacttgacaagaatgacaactgcgaactaatcccaaataagcagcagaaggat
accgacggggatggttttggtgacgcctgcagtgatgacaaggatggtgacaaggtctta
gatccggatgacaactgcatttataaccctaatgtgcacagcaccgacttcagacatctg
caaatggtggcactagacccgcaaacggcatctactcctccagtatgggtcgtctatgac
aacggtgcagaaattcatcagaccgtgaactctgacccagctatagcagtgggtgaccac
gttctgggcgatgtcgactttgaggggaccttcttcattgaagacacgagtgatgacgat
tttgttggctttatattcggttaccaaagcaatgccaagttctatgttgtgagttggaaa
aaagcaccacaaaactggttcaacaaggccgagagaggcgttactctgaagctagtaaac
tctaacacgggccctggcacgaaacttagggatgccttgtggttcactgggtctacacca
aaccaggcacaattgctctggcatgatggcagccttggatggaaacccaaggttgcctac
cgctggctgcttcaccaccggcctgatattggaaccataaggttctacttgtaccaggga
aataaccaggtcatggactctggaaacatttatgacagcaccctgaaaggaggcagactg
ggactcttctgcttctcccaggaagaaattatatggtccaacatggagtataaatgtgga
gagggtgtaccccaggcgatgttcaatgacttgcctgcaaacctacagaatcaggttctg
agctcttaa
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