Penaeus vannamei (Pacific white shrimp): 113814042
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Entry
113814042 CDS
T06111
Name
(RefSeq) PAS domain-containing protein cky-1 isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113814042
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113814042
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
Motif
Other DBs
NCBI-GeneID:
113814042
NCBI-ProteinID:
XP_070000216
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All DBs
Position
31:31809200..31924487
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AA seq
653 aa
AA seq
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MHDIIKMCSFEGTKSTKGASKMRRDLLNSEISQLRDLLPLPASTRQRLSQLQLMALVCVY
VRKSNYFQQDFSLFSPSAMKHTPASRAEAPNLEFLKALSGFLMMLTQGGKLLYISDNAAE
YLGHSMEDLLIHGDSVYDIIDKQDHAAVQAELVRGAQTAAAAHEEDRLFLCRMNVSRNAR
RQMRFGDQKVVLVAGHYLSYLPLCSRNEPVFLAHCTPVAMPETRESVVQGATNVFTSVHT
LDMKFINLDKNGEFYLGYNRSSLAGVSWYHLIHPENMREVQTKHRLITTSEQDRSCIVLL
RLQAAGGTWRWVHCVLQLKDGGEAGQTPPQASPQGAQQAAALSPSGGSGSSSSSSGGSGS
SGSSGGGGGGQSQQPVIVATNQVLGEKEAAVLRANSWLYHYYTMQSKLQYGLAYDTHAHR
VHAYYPQVMTYQTDPAASYMNPPALNGGHYHQSYAAPAAHSPYSLASPSAYAHLQHYHHH
YSVRLQHGLDYSRDPAWGYYDAAPASSALASAHAGTAPPARSGRASESPSETKRKSPAAP
AAHSGVAEGGGVAVATPVAVRAAPAGVHKGASSPELDQLEAPWKASPTQEVPDYPEYSPY
ITPPYSAATPTKHHVFSFEHGDPRDAHAHQDQHVPSGPPDPRDAPWYSHAFVR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatattatcaagatgtgcagcttcgagggcaccaagtcgaccaagggcgcctcc
aagatgcggcgcgaccttctcaactcggagatcagtcagctgcgcgacctcctgccgctg
ccggcgtccacgcgccagaggctgtcgcagctgcagctcatggccctcgtctgcgtctac
gtcaggaagagcaactacttccagcaagatttctcgctcttctctccctcagccatgaag
cacacgcccgcaagccgagcggaggcgcccaacctggagttcctgaaggctctcagcggc
ttcctcatgatgctgactcagggagggaagctgctctacatctccgacaacgccgctgag
tacctcggacactccatggaggacctcctgatccacggcgacagcgtctacgacatcata
gacaagcaggaccacgcggcagtgcaggcggagctcgtcaggggggcgcagaccgccgcc
gccgcccacgaggaggaccgcctcttcctctgcaggatgaatgtgtccaggaacgcccgc
aggcagatgaggttcggggaccagaaggtggtgctcgtcgcgggccactacctgtcgtac
ctgccgctgtgctcgaggaacgagcccgtgttcctggcccactgcacgcccgtggccatg
cccgagacccgcgagagcgtcgtgcagggcgccaccaacgtcttcacctccgtgcacacg
ctcgacatgaagttcatcaacctggataagaacggagagttctacctgggctacaaccgc
tcctcgctggccggcgtctcgtggtaccacctgatccaccccgagaacatgcgggaggtg
cagaccaagcacaggctcatcacgacgagcgagcaggaccggtcgtgcatcgtcctgctg
cgcctgcaggcggcgggcggcacgtggcgctgggtgcactgcgtcctgcagctcaaggac
ggcggcgaggcgggccagacgcccccccaggcctccccgcagggcgctcagcaggctgct
gccctcagcccctcggggggcagcggcagcagcagcagcagcagcggaggcagcggcagc
agcggcagcagcggcggcggcggcggcgggcagagccagcagccggtgatcgtggcgacg
aaccaggtcctgggcgagaaggaggcggccgtcctgcgcgccaactcgtggctctaccac
tactacacgatgcagtccaagctgcagtacggcctcgcctacgacacgcacgcgcaccgc
gtccacgcctactacccgcaggtcatgacctatcagacggaccccgcggcgtcctacatg
aatcccccggcgctcaacggcggccactaccaccagtcctacgccgcgcccgccgcccac
tcgccctactcgctggcctcgccctccgcctacgcccacctgcagcactaccaccaccac
tactccgtccgcctccagcacggcctcgactactcgcgcgaccccgcctggggctactac
gacgccgcgcccgcgtcctccgccctcgcctccgcccacgcgggcaccgcgccgcccgcg
cgcagcggccgcgcgtcggagtcgccgtcggagacgaagcgcaagtcgccggcggcgccc
gcggcccacagcggcgtggccgagggcggcggcgtggcagtggcgacgcccgtggcggtg
cgggcggccccggccggcgtgcacaagggcgcctcgtcgcccgagctggaccagctggag
gcgccgtggaaggcgtcgccgacgcaggaggtccccgactaccccgagtactcgccctac
atcacgccgccctactcggcagccacgcccaccaagcaccacgtcttctccttcgaacat
ggtgacccgagggacgcccacgcccaccaggaccagcacgtgccctcgggcccgcccgac
ccgcgcgacgccccctggtactcgcacgccttcgtcagataa
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