Penaeus vannamei (Pacific white shrimp): 113814043
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Entry
113814043 CDS
T06111
Name
(RefSeq) PAS domain-containing protein cky-1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113814043
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113814043
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
bHLH_NPAS4
PAS_3
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
113814043
NCBI-ProteinID:
XP_070000218
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All DBs
Position
31:32167280..32197093
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AA seq
641 aa
AA seq
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MRRDMINAEIGQLRDLLPLPPSTRQRLSQLQLMALVCVYVRKSNYFQQVFKQQDQNLSPT
PNIGFSKAMNGFIMMLTQGGKLLYISDNAAEYLGHSMEDLLIHGDSMYDIIDKQDHAAVQ
AELVRGSTSASPHEEDRLFLCRMNVSRNARRQMRFGDQKVVLVAGHYLSYLPLCSRNEPV
FLAHCTPVAMPETRESVVQGATNVFTSVHTLDMKFISLDRNGEFYLGYNRSSLAGVSWYH
LIHPENMREAQTKHRLITASEQDRSCILLLRLQAAGGTWRWVHCVLQVKDGIESGQQAQQ
NSQQNQQGTSSTVNGSSSSGGGGGGGGQSQQPVIVATNQVLGEKEAAVLRANSWLYHYYT
MQSKLQYGLAYDTHAHRVHAYYPQVMTYQTDAASSYMPATALNGSHAHSHTHAPAAHSPY
SLASPSAYAHLQHYHHHYSVRLQHGLDYSRDPAWGYYDAAAAAAPSDQPATQHVAPATPT
PVHTPRPSKKSASPNSSPRRSPSTPQSAHGISEGGGVAVATPVAVRAAPAGVHKGASSPE
LDQLEAPWKASPTQEVPDYPEYSPYITPPYSAATPTKHHVFSFEQSDPRDMGVGRDQRVP
SVESGELPLWPSDLPAKASPWLPPFDDGAALPLRHLHHATL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcggagggacatgatcaacgcagagatcgggcagctgcgggacctcctgccgctgccg
ccgtccacgcgccagaggctgtcgcagctgcagctcatggccctcgtctgcgtctacgtc
aggaagagcaactacttccagcaagtgttcaaacaacaggaccaaaacctcagtccgacg
cccaacattggattctcgaaggccatgaatggtttcatcatgatgctgactcagggaggg
aagctgctctacatctccgacaacgccgctgagtacctcggacactccatggaggacctg
ctcatccacggcgacagcatgtacgacatcatcgacaagcaggaccacgcggccgtgcag
gcggagctcgtcaggggctccacgtcggcgtcgccccacgaggaggaccgcctcttcctc
tgcaggatgaacgtgtccaggaacgcccgcaggcagatgaggttcggggaccagaaggtg
gtgctggtcgcgggccactacctgtcgtacctgccgctgtgctcgaggaacgagcccgtg
ttcctggcccactgcacgcccgtggccatgcccgagacccgagagagcgtcgtgcagggc
gccaccaacgtcttcacctccgtgcacacgctcgacatgaagttcatcagtctggacaga
aacggcgagttctacctgggctacaaccgctcctcgctggccggcgtctcgtggtaccac
ctgatccaccccgagaacatgcgggaggcgcagaccaagcacaggctcatcacagccagt
gagcaggatcgctcgtgcatccttctgctgcgcctacaagcggccggagggacgtggcgg
tgggtccactgcgtccttcaagtcaaggacggaatagagtcgggtcagcaggctcagcag
aactctcagcagaaccagcaaggcaccagcagtaccgtcaatggcagcagcagcagcggc
ggcggcggcggtggcggcgggcagagccagcagccggtgatcgtggcgacgaaccaggtc
ctgggcgagaaggaggcggccgtcctgcgcgccaactcgtggctctaccactactacacg
atgcagtccaagctgcagtacggcctcgcctacgacacgcatgcgcaccgcgtccacgcc
tactacccgcaggtcatgacctatcagaccgacgccgcctcctcgtacatgccggccacg
gccctcaacgggagccacgcccattctcacacacacgcgcccgccgcccactcgccctac
tcgctggcctcgccctccgcctacgcccacctgcagcactaccaccaccactactccgtc
cgcctccagcacggcctcgactactcgcgcgaccccgcctggggctactacgacgccgcc
gccgccgccgcgccctccgaccagcccgccacgcagcacgtcgcgcccgccacgcccacg
cccgtgcacacgcccaggccgagcaagaagagcgcctcgcccaactcgtcgcctcgaagg
tcgccctcgactccccagtctgcccacggcatctccgagggcggcggcgtggcagtggcg
acgcccgtggcggtgcgggcggccccggccggcgtgcacaagggcgcctcgtcgcccgag
ctggaccagctggaggcgccgtggaaggcgtcgccgacgcaggaggtccccgactacccc
gagtactcgccctacatcacgccgccctactcggccgccacgcccaccaagcaccacgtc
ttctccttcgagcagagcgacccgcgcgacatgggcgtggggcgcgaccagcgggtgccg
tccgtggagtcaggcgagctgccgctgtggccgtctgacctccccgcgaaggcgtcgccg
tggctgccgcccttcgacgacggcgcggcgctgcccctgcggcacctgcaccacgccacc
ctctga
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