Penaeus vannamei (Pacific white shrimp): 113814087 Help Entry 113814087         CDS       T06111                                  Name (RefSeq) DNA-binding protein SMUBP-2   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism pvm  Penaeus vannamei (Pacific white shrimp) Brite KEGG Orthology (KO) [BR:pvm00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:pvm03009]     113814087    03012 Translation factors [BR:pvm03012]     113814087 Enzymes [BR:pvm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      113814087     5.6.2.5  RNA 5'-3' helicase      113814087 Ribosome biogenesis [BR:pvm03009]  Eukaryotic type   Other ribosome biogenesis factors    113814087 Translation factors [BR:pvm03012]  Eukaryotic type   Initiation factors    Initiation associated factors     113814087 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B R3H AAA_30 AAA_19 zf-AN1 Viral_helicase1 AAA_22 ResIII UvrD-helicase AAA_16 DEAD AAA DnaB_C Flavi_DEAD nSTAND3 PhoH UvrD_C_2 NPHP3_N AAA_33 Motif Other DBs NCBI-GeneID:  113814087 NCBI-ProteinID:  XP_069985026 LinkDB All DBs Position 2:4557404..4651612 Genome browser AA seq 1101 aa AA seqDB search MTKEKAQLSRNDWIALHCSLLEEERKAEVSAAQSEVEGASLKVLEARGVVLGHLVISERS TGLYGRPMITFVPARKDAVLPANNFSSGDIVGVCDSGSGQQCATGVVKYVSQKNIQIVLD DDADELDSLSNDTQLRLNKLANDVTYRRIKSGLTELDKLINGPAAHTVSVLFGESPPRSA APSLPPQLTGADGKIQLFNKNLDNSQREAVEFAIQRSDLAVVHGPPGTGKTTTIVEVIRQ HVKLKSKVLACAPSNLAVDNLVERLAAAKVRVVRVGHPARATPLTQRYTLDCLMHHSDES QLLKDIHRDINDQLKQLKTAKDRGKRQHIRREIKTFRKELYEREMRLTKQILMTSDVILA TLTSSSNDGPLKLLREDFFDVVVIDECSQAIEAACYMSLLRAPKLIIAGDHCQLPPTIVS KEAAEKGLELSLMERIINQCGEEVVRMLTVQYRMNTDIMQWASTAMYQDRLVAHSSVASH LLHQMQGVTTNEDTERSLVLVDTAGCDCQELDTAEEQSKGNEGEAIIVSHYVRALLEAGL PEEDVAVITPYNLQVELVRGLLREDHPRVEVRSVDGFQGREKEAVVMSLVRSNKQGTVGF LSENRRLNVAVTRARRHLAVVCDSETVGTDPFLKGFLDYMVKHALVRTAFEFQHEMETTE VATPECISMRPKDEKKDKKSDSKNKKPNNRKDGKEGPKRKKGDSKPKYKPPTEEENQERR QKLEAIIKDFVSSASNVYQFPPGLNSFERRLVHEICDAEGLFHQSQGEGSERYLVVQKEK TGEGAEARNKDKEEEEKEKKDEEKEENDKEKEVLPVQVEEGEKEDEGIEDDEEEGQGEDQ EEEEEENEDDSEFTEEREEKESPTADGGAIPKLKNLNLTDSKPRIAFINGMYQEVSREHN NTKADKTGDKMGKENEKSAARCQSCGKDILQQNFSVHSAQCERKMRAKKEEMERRKANQK KKKDERRDNKPGKDKKGEEEEEDFDSLIARFTKEDNTCSQPKCKTPTTVIFQQCPFCRKT FCLTHHMAEVHGCGDEARRHARAMVIREGVIYPGSGIPSKKPKDAKRKQLQRNLDKKLGD LTSQRQSKKPGKDKDKGKGTK NT seq 3306 nt NT seq  +upstreamnt  +downstreamnt atgacgaaagagaaagctcaactgtcgcgcaatgattggattgccctccattgctcgctg ttggaagaggagaggaaggcagaggtcagcgctgcacaatcagaggttgaaggggcatcc ctcaaggtcctcgaggcaagaggagtggtgctagggcatttagttatcagcgagagatct actggcctctatggacgacccatgatcacatttgtccctgcaaggaaagatgctgtttta ccggcgaataatttttcttcaggggatattgttggtgtatgtgacagtggatcaggccag cagtgtgcaacaggagtggtgaagtatgtttcacagaaaaatatacagattgttctcgac gatgacgctgatgagttggacagccttagcaatgatactcaactgcgactgaacaagcta gcaaatgatgttacctacagaaggataaaatcaggactgactgagcttgataagttgatt aatggcccagctgcgcacacagtctcagtgttatttggtgaatctcctccaaggtctgcg gctccttccttaccaccacaactaactggagctgatggcaagatacaactttttaacaaa aacctggacaattcacagcgggaggcagttgagtttgccattcagaggagtgatctggca gtggtccatggtccgcccggcacagggaaaactacgaccattgtggaggtcattaggcag catgtgaaactcaagtcaaaggttttagcttgtgccccgtccaaccttgcagtggataac ctggtagaaagactagcagcagccaaggttcgtgttgtgcgtgtgggtcatccggcacgt gccactccactcacccagcgttatactctggactgccttatgcatcacagtgatgaatcc caactattgaaggatattcatcgcgatattaacgaccagcttaaacaactgaagacggcc aaagacagaggaaagaggcagcacatcaggagggaaattaagacatttaggaaggagtta tacgagagggagatgagactcacaaagcagatcctgatgaccagtgacgtcatcttggct accctcaccagcagtagtaatgatggtccccttaagctcttgagggaggatttcttcgat gtggtggtcattgacgaatgctcgcaggcaattgaagctgcctgttatatgtccctcctc cgagccccaaagctgataatagcaggcgatcactgccagcttcctcctactattgtgtct aaagaagcagctgagaagggcttggaactctcgctcatggagagaattataaatcagtgt ggagaagaagttgtcaggatgttaactgtgcagtaccgcatgaataccgacatcatgcag tgggcatcgacagccatgtaccaagaccgcctagttgcccactcctctgtagcctcacat cttcttcatcagatgcagggagtgacgactaatgaagatacagaacggtccctggttctg gtggacacggccgggtgcgactgccaggagctggacacggcggaggagcagagcaaaggg aacgagggcgaggctatcatcgtcagccactacgtcagggcgttgctggaggccgggctc cccgaagaagacgtggcggtcatcacgccctataatcttcaggtggagctggtgcggggg ctgctccgggaggaccaccccagggtagaggtgcgctcagtggacggcttccaggggcgc gagaaggaggctgtggtcatgtccctcgtgcgatccaacaagcagggtactgtgggcttc ctgagtgagaatcgccgcctcaatgtagcggtgactcgcgcgagacgacacttggctgtc gtctgcgactcggagacggtaggcacggatcctttcctcaagggattcttggattacatg gtgaagcacgccctcgtcaggacagccttcgaattccaacatgaaatggaaacgacggaa gttgcaactccagaatgcatatccatgagaccaaaagacgagaagaaagacaaaaaatcg gattcgaagaacaaaaagcccaacaacaggaaggacgggaaagaaggccccaaaaggaag aagggcgactcgaagcccaaatacaaacccccgacggaggaggagaaccaggagagacgc cagaagttggaggcgatcatcaaggacttcgtcagttcagcgagcaacgtctaccagttc ccgccgggtctgaattccttcgagagacgtctggttcacgagatctgcgacgcggagggc ctcttccaccagagtcagggggaaggaagtgaacggtatcttgtcgttcagaaggagaag acgggagagggcgctgaggcgaggaataaggacaaggaggaggaagaaaaagagaagaag gatgaggaaaaggaggagaatgataaagagaaggaggttttaccagtacaggtggaggaa ggagagaaagaggatgaaggtatagaagatgatgaagaggaaggacagggagaagaccaa gaagaagaggaagaagaaaatgaagatgatagcgaattcacagaagagagagaagagaaa gaaagccccacagctgatggaggtgccatcccaaagctgaagaacctgaacctcactgac tccaaaccacgcatagcattcatcaacgggatgtatcaggaagtcagcagggaacacaat aacacaaaggctgataaaacgggggataaaatgggcaaagagaatgagaagtcagcggca cggtgtcagagctgcggcaaagacatcttgcaacagaacttcagtgttcatagtgcacag tgtgagaggaagatgagggcaaagaaggaggagatggaaagaagaaaggcaaaccagaaa aagaagaaggatgagaggagggataacaagccaggaaaggataagaaaggtgaagaagag gaagaagattttgacagtctgattgctcgcttcacaaaggaggacaacacatgctcgcag cccaagtgcaagaccccaacgaccgtcatcttccagcagtgtcccttctgcaggaagacc ttctgtctgacgcaccacatggccgaggttcatggctgtggggacgaagccagacgacat gctagggcgatggtgatacgagaaggagtgatatacccgggcagtggcattccgtcaaag aagcccaaagacgccaagcgcaagcagctgcagaggaacctggacaagaagttgggtgat ctaacaagccagagacagagcaagaagcccggcaaagataaggacaaaggcaaaggcaca aagtga

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