Penaeus vannamei (Pacific white shrimp): 113814110
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Entry
113814110 CDS
T06111
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04080
Neuroactive ligand-receptor interaction
pvm04082
Neuroactive ligand signaling
pvm04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113814110
04082 Neuroactive ligand signaling
113814110
04519 Cadherin signaling
113814110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvm04040
]
113814110
Ion channels [BR:
pvm04040
]
Ligand-gated channels
GABA-A
113814110
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TipAS
Motif
Other DBs
NCBI-GeneID:
113814110
NCBI-ProteinID:
XP_069991457
LinkDB
All DBs
Position
20:complement(31857129..32049598)
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AA seq
608 aa
AA seq
DB search
MTATKGPAASRRRLLHLLIICISVTCSLEVRETAPPPLAQHGFGTPTYGSPVHTYAHLPP
EYDYHPPVAAYVPPVHARTLIRAPRSGDHPGSGANTSLPQHDQPRPTTLPLSQQARTASR
SSSDMARLSHNISAILENLLKNYNNQVRPGYHEGRTTVVKISMLIRSMGPISEKDMKYSM
ECYMRQYWSDERLKFNGPLDQLTLNIKMLEALWKPDTYFHNGLGSYVHMTTRPNKLIRIN
QNGDILYSMRLTIKAKCPMVLRNFPMDKQSCPLVISSFGYTDKEVRYEWAPKKVEFEEGM
GLSQFDILNTKCTNYSVRWRSGKGLFSALQVNFNLSRSAGYFLIQVYVPCFLIVVLSWVS
FWINREATSDRVGIGIITVLTLATISLDTRTDLPKVHYATALDWFILMSFGYCIATLLQF
AGVHFFTKVGSGEIMAEEEEWEDLEIIEDCSPEVVEECVQTYDSPHDAACGTSVEGRIEV
VFLNSNHPNCPRSAATLYATLNSDAGVLNHAGDCLATFRTAETQTEKKERCWTQFLHCVV
GDDQYRRERQRRACLQRSVNSVSAIDTVSRILFPASYGLLNLWYWYSYYDTELISNWSDP
GFENSARQ
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgacgaagggacctgctgcctctcgtcgacgcctgctgcacctgctgatcatc
tgcatcagcgtgacctgcagcctggaggtgcgtgagaccgcccccccacccttggcacaa
catggatttggcacgcccacttatggctccccagtgcacacctacgcccacctgccgccc
gagtatgattaccacccgcccgtagccgcctatgtcccacccgttcacgcccgcactttg
attcgcgcccccaggtctggcgatcaccctgggtcgggggcgaacacttccctcccccag
catgaccaacccagacccaccacgctgccgttgagtcagcaggccaggacggcgagcagg
agcagcagcgacatggcccgtctatcgcacaatatctcggccatcctcgagaatctgctc
aagaattataataaccaagtacgacctggatatcacgagggccggacgacggtggtgaag
atcagcatgttgattcgctcgatgggacccatatccgaaaaggacatgaaatactccatg
gaatgctacatgcggcagtactggagtgacgaacgcctcaagttcaacggcccgctggac
caactcacgctcaacattaagatgctggaagccctgtggaaaccggacacctacttccac
aacggcctcggttcctacgtgcacatgaccacgaggcccaacaagctcatacggatcaat
caaaacggagacatcctttactccatgaggctcactatcaaggccaagtgtccaatggtc
ctgaggaatttcccaatggacaagcagtcgtgtcctcttgtcatcagtagcttcggctac
acagacaaagaagtacggtacgagtgggcgcccaagaaggtggagttcgaggaagggatg
gggctgagtcagttcgacatcttgaacacgaaatgcaccaattactccgtcaggtggagg
tcggggaaaggtttgttctcggctctgcaagtgaacttcaacctgtcccggagtgccggc
tacttcctcatccaggtgtacgtgccttgcttcctcatcgtggtcctgtcctgggtgtcc
ttctggatcaaccgcgaggccacgagcgatcgagtcggcatcggcatcatcacggtgctg
acgctggcgaccatcagcctggacacccggacggacctcccgaaggtgcactacgccacc
gccctcgactggttcatcctcatgagcttcggctactgcatcgccacgctcctgcagttc
gccggagtgcatttcttcacgaaggtcggctccggggagatcatggccgaggaggaggag
tgggaggacctggagatcatcgaggactgcagccctgaggtcgtggaggagtgcgtgcag
acgtacgactccccccacgacgccgcctgtggcacctcggtcgaaggtcgcatcgaggtc
gtcttcctgaattcgaatcacccgaactgcccgcgaagcgccgccacgctctacgccacg
ctcaactccgacgccggggtgctgaaccatgcgggggactgcctggcgaccttcaggacg
gcggagacgcagacggagaagaaggagcggtgctggacgcagttcctccactgtgtcgta
ggagacgaccagtaccgacgggagcggcagcggagggcgtgtctccagcgctccgtcaac
tccgtctccgccatcgacaccgtcagtcgcatcctcttcccggcctcctacgggctcctc
aacctgtggtactggtactcctactacgacaccgagctcatctccaactggtccgacccg
gggttcgagaactcggcgagacagtga
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