Penaeus vannamei (Pacific white shrimp): 113814443
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Entry
113814443 CDS
T06111
Symbol
LanB2
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04512
ECM-receptor interaction
pvm04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113814443 (LanB2)
04518 Integrin signaling
113814443 (LanB2)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
JAG1-like_EGF2
FAM180
Motif
Other DBs
NCBI-GeneID:
113814443
NCBI-ProteinID:
XP_069998123
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All DBs
Position
28:32352530..32455124
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AA seq
1669 aa
AA seq
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MARARLLRTPPGYVLEAALILCCVCSSLGQYPHFPFLEGQQGRLDVIEEPLVQPIDPQTG
RTSRCYDETGKAQKCVPEFVNAAFNRRVEVTNTCGEQRPQEYCLQTGGYGSKKACEICNA
YVPELAHPAQYLTDFNNNNNHTWWQSETMFEGIQFPNQVNLTLDLGKTFDITYVRLFYHS
PRPESFAIFKRTDDDKEWVPYQYYSATCRDTYGIPDSNYVRREDETRALCTSEFSDISPL
TGGNVAFSTLEGRPSAYNFEKSAELQDWVSAKAIRIVLDRLNTFRDEVFGDPRVLKSYFY
AITDFAVGGRCKCNGHASECVASTGLGGEVELVCRCEHNTAGNDCNECLPFYNDAPWARA
TATDAHECKACNCNGYSNRCYFDQDLYDQTGHGGHCLDCAANRAGPNCERCRDNYYERED
GVCIPCNCNEIGSRSLQCASDGLCQCKPGVTGEKCDKCADNYFDFGPQDRVFGLEGCKPC
GCNVAGSRNNEASCDPTSGVCLCKQHVEGQQCDQCKPGYFNLDLENEFGCTPCFCYGHSS
ICSSASGYSQRLGALVYLYSTCVIESGFVRGEERWRAEDGTGRSISMNYNPVAQSLAVSS
SGREKIYFLAPDRFLGDQRASYNHELSFLLRVGELGPQASTEDIILEGAGLSISAPIFAQ
GNPLPSTQKQEYIFRLHEDSQFGWSPRLSSRDFMSLLSNLTAIKIRGTYTYEGHGFLDDV
KIQTARRGLFGEPATWIEMCTCPEGYVGQFCESCAPGFRHLPANGGPFASCIPCDCNNHA
DICDSETGRCICQDNTAGDQCERCAKGYYGNALHGTNNDCQPCPCPNGGACIQLPDDTVV
CLECPKGYAGPRCELCTDGFFGDPKGRHGPPRPCERCDCNGNIDPNAVANCNRTTGECLK
CIYNTGGFYCDQCLPGFFGDALALPKGDCRPCRCNPYGTVSERYGPPVCDQLNGQCQCKP
HVIGLKCDQCEPGFWNLTSGVGCEPCNCDPVGALNGTCNTDYGQCVCRIGVTGRKCDMCE
PFHYGFSLDGCKPCDCDQIGSVSLQCDATGQCPCRENVEGRRCDRCRENTYDKQAGCRDC
PACYNLVLDSVSVHRERLAELERLLADIVSNPTVLNDEDFEETLSTVMTQVDQLWEDARE
AAKSGGDKTVAQHIEELEERINGVKEVLMSIRQAVGRGSDLATLGKLNITQAEDIIKRAR
EALTNAQIYLDVQGNDALSKAFDRSNQFGQQSERMSKIAREARLLADEQEDDATSIEVLA
YNARNTSNDAFELARKAMDDQRNITDFIKKLNDDVQGLSSLHDSTMRTANESLQQAKLTY
REALEINTEASSIAIPPIDTSVLKAQAVAIINEAERIKQDTEGLIDERSALITDIEVQLE
VTSDLVERGWIEQQITTELLADTFTAEGKAKEARAKAEQTLSEALETLAILEGFDKQVQE
SRLKAEATLETVGEIEALIVEAETQTKEAEEALMGAESDAKDARDIAKDAQSTAEDASNQ
AGDVRTKADATKNEASTLNDMADELAGRVAETDARVSTFEAQALQDEQQVMEAQEKANQA
KDRADEASSRVREAYEFVQEILDILERSPDLDPEQLESLELRLEEAWQMYHQSGIESTVT
ELSESRSWQERQISLYEEEIRRLRIEVQNIFEIKISLPDGCYSQTKLEP
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgctcgcctcctcaggactccgccaggatatgtgctggaagccgcgttaatc
ctgtgctgtgtgtgtagctcgctcggacaatacccccatttcccgttcctcgagggacag
caggggaggctagacgtgatcgaggagcctttagtgcagccaatagacccgcagacaggc
agaacttcgcggtgttatgacgagacgggcaaagcacagaaatgcgtgcccgagttcgtg
aatgcagccttcaaccggcgcgtggaggtgaccaacacgtgcggcgagcagcgccctcag
gaatactgcctccagacgggcggctacggctccaagaaggcgtgcgagatctgcaatgcc
tacgtgcccgagctcgcccaccccgcccagtacctgacggatttcaacaacaacaacaac
catacgtggtggcagtcggagaccatgttcgaggggatccagttccccaatcaggttaac
ctcacgctggatctcggcaagacctttgacatcacgtacgtacggctgttctaccactcg
ccacgacccgagtccttcgccatcttcaaacggaccgacgacgacaaggagtgggtgccc
tatcagtattacagcgccacctgccgcgacacctacgggatcccggactcgaactacgtg
cggcgcgaggacgagacccgcgccctctgcacgtccgagttctccgacatctcgccgctg
actggggggaacgtcgccttttccacgctggaagggaggccgtcggcttacaacttcgag
aagagcgccgagctgcaggactgggtctcggccaaagccatccgcattgtgctcgaccgc
ctcaacaccttcagagacgaggtcttcggtgatcctcgggtactcaagtcctacttctac
gccatcactgatttcgccgtcggtggcagatgcaagtgcaacggccacgcctccgagtgc
gtggcttcgacggggctgggaggcgaggtcgagctcgtgtgccgctgcgagcacaacacg
gccgggaacgactgcaacgagtgcctgccattttataacgacgctccctgggcacgtgcc
acggcgacggatgcccacgagtgcaaggcctgcaactgcaacggctactccaaccgctgc
tacttcgaccaggacctgtacgaccagacgggtcacggaggtcactgcctggactgcgcc
gccaaccgcgcgggacccaactgcgagcgctgccgtgacaactactacgagagagaagat
ggcgtctgcatcccgtgcaactgcaacgagatcggttcgcgcagtctgcagtgtgccagt
gacggcctctgtcagtgcaagccgggagtgacaggagaaaagtgtgacaaatgcgctgac
aactatttcgattttggaccccaggatagagtgtttggattggagggttgcaagccatgc
ggatgtaatgtagctggtagccgcaacaacgaggcaagctgcgacccaacatctggagtc
tgtctttgcaagcagcatgtggaagggcagcagtgtgaccagtgcaagccgggttacttc
aacctggacttggagaatgagtttggctgcacaccatgcttctgctatgggcactcgtct
atttgttcctcagccagcggatactcccagaggctaggggcattggtgtatctgtatagt
acatgcgttattgagagtggttttgtgcgcggtgaggaacgctggcgtgcagaggatgga
acagggcggtcaatctccatgaactacaacccagttgcacagagcctcgctgtctcctct
tcaggaagggaaaagatctacttcttggcaccagatcgtttcttgggtgatcagcgtgcc
agttacaaccacgagttgagtttcctgctgcgtgtgggtgagctcggaccccaagccagt
acagaagacattatcttggaaggagccggtcttagcatctctgctcctattttcgctcag
ggcaatccacttcctagcacacagaaacaagagtatattttccggctacatgaagactcc
cagtttggttggtccccacgcctttcatcaagggacttcatgtctctcctgtctaatctc
acagcaattaaaattcgcggcacttacacttatgaaggtcatggatttttggatgatgtc
aagattcagactgcaagaaggggtttgttcggagaacctgcaacctggattgaaatgtgc
acatgtcctgaaggctatgtgggccagttctgtgagtcttgcgcacctggattccgacat
ttacccgccaatggtgggccttttgcctcctgcattccgtgtgactgcaacaaccacgca
gacatctgtgattctgagactggacgctgcatctgccaagacaacactgctggagaccag
tgtgaacgctgtgctaagggttattatggtaatgcccttcatggtaccaacaatgattgt
cagccatgcccttgccctaacggaggtgcctgtatccagttacctgatgatacagttgtg
tgtctggagtgccctaagggatatgcaggtcctcgctgtgagctctgtactgacggtttc
ttcggggaccccaagggacgtcatgggccccctcggccatgtgaacgttgtgactgcaat
ggcaacattgatccaaatgctgtggccaattgtaatcggacaactggtgaatgtctcaag
tgtatctacaacactggaggattttactgtgaccagtgtttaccaggcttctttggagat
gctctggcactaccaaagggagattgtcgtccatgtcgatgcaacccatatggtacagtg
agtgagcgttatggcccaccagtctgcgaccaactgaatggacagtgccagtgtaagccc
catgtcataggacttaagtgtgaccaatgtgagcctggattctggaaccttaccagtggt
gtgggatgtgaaccatgcaactgtgaccctgtaggagcactcaacgggacttgcaacaca
gactatggccagtgtgtctgccgcattggagtcacaggacgcaagtgtgatatgtgtgaa
cctttccattacggcttctcacttgatggatgcaagccatgtgactgtgaccagattggc
tctgtttccctgcagtgtgatgccactggccagtgcccgtgccgagaaaatgtggaaggc
cgaagatgtgaccgttgccgagagaacacctatgataaacaggctggatgtagagactgc
cctgcttgctacaacctggtactggacagtgtgagtgtccaccgtgagcgattggctgag
ctggagcgcctcctagcagacattgtaagcaacccaactgtgctcaatgatgaagacttt
gaagaaacgctgtcgactgtcatgacccaagttgaccagctttgggaagatgcacgggaa
gcagccaaatctggtggagacaagacagtggcacagcacattgaggaactggaagaacgc
atcaatggtgtcaaagaggttttgatgagcatacgacaggcagttggccgtggctcagat
ctggcaacacttggaaagctaaacattacacaggctgaagatattatcaaaagagcacga
gaagcccttacaaatgcacagatctatttggatgtccagggcaatgatgctctaagcaag
gcttttgaccgctccaaccagtttggacaacagtcagagcgcatgtccaagattgctcgg
gaagctcgtctcttagcggatgagcaggaggatgatgctacaagtattgaagttttggct
tataatgctcgtaatacttctaatgatgcctttgagcttgcacgtaaggctatggatgac
caaagaaatattacagatttcattaagaaacttaatgatgatgtgcaaggcctgtcatct
ctccatgacagtaccatgaggactgccaatgaatctctacaacaagctaaattgacatac
agagaagccttggaaatcaacacagaggcttctagcattgccattccacccattgatact
agtgtgctgaaagctcaagctgtggccatcatcaacgaggcagagagaattaagcaggat
accgagggattgattgatgagagaagtgcccttataactgacattgaagtacagcttgag
gtaacgtcagatctggtagagcgtggttggatcgagcagcaaataaccacagagctctta
gccgacactttcactgcagagggaaaagctaaagaagcaagagcaaaagcagagcagacc
ttatctgaagctcttgaaactcttgctatcctggaaggatttgacaagcaagttcaggag
agccgtctgaaagcagaagctactctagaaactgtgggagagattgaagcccttattgtt
gaagctgagacacaaactaaggaggctgaggaagcacttatgggggcagagtctgatgct
aaggatgctcgggacattgccaaggatgcccagagcacagcagaagatgcaagcaatcag
gcaggagatgtccgcaccaaggcagatgctactaagaatgaagccagcacactgaacgac
atggcagatgagttggctgggagagttgcagaaacagatgctcgtgtgagcacctttgag
gctcaggctttgcaagatgaacagcaggttatggaagctcaagagaaagctaaccaggca
aaggacagggcagatgaagccagttctagagtccgtgaagcatatgagtttgtacaggaa
attttggatatcttggaacgatctccagacttagacccagaacagttggagtctctagaa
ttgcgtctggaagaggcatggcaaatgtaccatcaaagtggaattgagtccacagtcacc
gaattatctgaatcccgcagctggcaggaacgccagatttcactctatgaagaggaaatt
aggcgactaagaattgaagttcaaaatatctttgagattaagatctcccttccagatggc
tgctacagtcagaccaaattggaaccttaa
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