Penaeus vannamei (Pacific white shrimp): 113814499
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Entry
113814499 CDS
T06111
Symbol
Hr3
Name
(RefSeq) probable nuclear hormone receptor HR3 isoform X1
KO
K14033
nuclear receptor subfamily 1 group F member 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvm03000
]
113814499 (Hr3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pvm03310
]
113814499 (Hr3)
Transcription factors [BR:
pvm03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113814499 (Hr3)
Nuclear receptors [BR:
pvm03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
113814499 (Hr3)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DSHCT
TFIIA
Motif
Other DBs
NCBI-GeneID:
113814499
NCBI-ProteinID:
XP_027222334
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Position
3:25867797..26138795
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AA seq
665 aa
AA seq
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MDILSEIFGPGWEREVTGDAVDTTTPSSSTPTPTNRPPSATDKKSNSIKGKAQIEIIPCK
VCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCVVDRVNRNRCQYCRLQKCL
NLGMSRDAVKFGRMSKKQREKVEDEVRYHRAQMRAVPGQETSPDSSMYEPPTPTSSDIYP
PTYHYSPDLTSFTPTGYNYTPQTTTSTIPFEITPDYVVDSTTFGDVRQTSLDPLPDSGAM
SPVVSSGKGGYVHRGAGTGGGGGGGGGGGGGSEQTGGGQMRGAGPGGGGGGGGGEGGGGG
GGGGGSLIGGADILIKEEVETCFNMDTLQTTTRLGEGGGASSMSDKNFTPVDSTTYLPPG
PTSPPLSQPQQQQQPHQQLQQQQQQHLQQQQQQQQPTVVGATVLPEEESVSPHPEQLAEI
IARWVADAHLRTCLYSTEHILDVMRKQSPDITNINYYKNMAHEELWYDCAQKLTSVIQQI
IEFAKAVPGFRKFSQDDQIVLLKAGSFELAVLRMTRYYDVNQNCVVYGDTLLPMEAFLTT
ETVEMKLVNNVFEFAKTIAELKLTDTELGLYSALVLLQADRPGLRGTDEISKLNEAVGRS
LCLELEKTHRYPVKGDITVYAFLLAKMPALRELSMLHQEALSKFKRNAPHLQFSDLHKEI
FNVDS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggacatattaagcgaaatctttgggccggggtgggagcgggaggtgaccggggatgcc
gtggacaccaccacgccctcctcctccacgcccacacccactaaccgcccgccctccgcg
actgataagaagtcaaactccatcaaaggtaaagcccagattgagatcattccctgcaag
gtgtgcggcgacaagtcctccggcgtccactatggtgtcatcacgtgcgagggctgcaag
ggcttcttcaggaggtcccagtcctccgtcgtcaactaccagtgcccgcgccagaagaac
tgcgtggtggatcgggtcaaccgcaaccgatgccagtactgccgcctgcagaagtgcctc
aacctcggcatgtccagggatgctgtgaagttcgggcgcatgagcaagaagcaacgcgag
aaagttgaagacgaagtccgctaccaccgggcgcagatgagggccgtgccaggacaagag
acctcgccagactcttccatgtacgagccgcccacgcccacatcctcagatatctacccg
cccacgtaccactacagcccagaccttacgtcctttacgcctacagggtacaactatacg
cctcagactaccacttctacaataccttttgagatcaccccagattacgtggtcgattct
accacttttggtgatgttcgccagacctccttagacccactaccggattctggggcaatg
tcaccagttgtgtcctctggtaaaggcgggtacgttcacagaggagctggcacaggaggt
ggaggaggaggaggtggtggaggtggaggaggaagcgagcaaacaggtggtggtcagatg
cgcggtgcagggcccggaggaggaggcggaggaggaggaggggaaggaggaggaggtgga
gggggaggtggtggaagcctcattggtggagcagacatacttataaaagaagaagtagag
acgtgctttaacatggacaccttgcagaccaccaccagattgggtgaaggtggtggtgct
tccagtatgtccgacaagaactttactcccgtagacagtacgacgtacctgcctcccgga
cccacctctccacccctcagtcaacctcagcagcagcaacagccacatcagcagctacag
caacaacagcaacagcatctacaacagcaacaacaacaacagcagccaactgtagtcggt
gcaacagtgttaccagaagaagaaagcgtgtctccccatccggagcagctggccgagatc
atcgcccgctgggtcgccgacgcgcacctgcggacgtgtctctactccacagagcacata
ttagatgtcatgaggaaacagtcgccggacatcaccaatatcaactactacaaaaatatg
gcacatgaagaactttggtatgactgtgctcagaagttgacatcggtcattcagcagatc
attgagtttgctaaggctgttccaggctttagaaagttttctcaagacgatcaaattgtt
cttctcaaagcagggagtttcgagctggcagtgcttcggatgacgcggtactacgatgtg
aatcagaactgcgtggtctatggggacacactactgcccatggaggctttcctcacaaca
gagacagtggaaatgaaacttgttaacaacgtctttgaatttgccaaaactatcgctgaa
cttaagttgacagacacagagttaggcttgtactctgctcttgtgctcctacaagcagat
cggcccgggttgcgcgggacggacgagatttccaagctgaacgaggccgtcgggcggtcg
ctctgtctggaactcgagaagacacaccggtacccagtcaagggggacatcacggtctat
gccttcttgctggctaagatgccagccctcagggagctgagcatgctacaccaggaagca
ctgagcaagttcaagaggaatgcaccacaccttcagttctcagatcttcacaaggagatc
ttcaatgtagattcctga
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