Penaeus vannamei (Pacific white shrimp): 113814743
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Entry
113814743 CDS
T06111
Symbol
Rm62
Name
(RefSeq) uncharacterized protein Rm62 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113814743 (Rm62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113814743 (Rm62)
03009 Ribosome biogenesis [BR:
pvm03009
]
113814743 (Rm62)
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113814743 (Rm62)
Spliceosome [BR:
pvm03041
]
Complex A
U1 snRNP components
U1 related factors
113814743 (Rm62)
Complex B
113814743 (Rm62)
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
Helicases
113814743 (Rm62)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113814743
NCBI-ProteinID:
XP_069992490
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Position
22:complement(2731336..2740377)
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AA seq
644 aa
AA seq
DB search
MSYRSSRRSPSRSRSRSRSRSRDRGRRDRDDWGRGGGYGGSGGGGRPSLKGRQPGERLRK
PKWDLSRLAPFEKNFYQPTPVVVNRQPYEVEQYRNEKEITLRGKNIPNPIQYFTDYNFPD
YVMAEIRRQGYEAPTPIQAQGWPISLQGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLE
RGDGPIALILAPTRELAQQILTVAQDFGSSSKIRSTCVFGGAPKGPQIRDLERGVEICIA
TPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWP
KEVRNLAEDFLKEYIQLNVGSLSLAANHNILQIVDVCQEMEKDTKLRQLLNEMAQERAYK
TIIFIETKRKVEDVTRGLRSTGWPAMCIHGDKSQQERDWVLSEFRSGRAPILVATDVAAR
GLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADNCKQAKDLIEVLKEA
NQVVNPRLYEIMEMGRGGGGKGRNRWRGRDDDRRGGFGRDRDRSRPSGGRNGYTNGNGYG
TSPQVLGGFNKFGGGGSNNAMVNGAVAGQARYNGPPPLMGSGAVKASSQAGTPSQLNGTQ
RPPGQSMGANMAMGMFNQAASMAGGVGGLGMMGAVPGALSWPRQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacagaagcagccgcaggtccccttctaggtctcgctcccgttctcgttctcgc
tctcgcgaccgtggtcgacgcgatagggatgactggggccgaggtggagggtatggtggc
agcggtggaggtgggaggccgtcgctgaagggaaggcagccaggagaacgcctgcggaag
ccaaagtgggacctgtccagacttgcccccttcgagaagaacttttaccagcccacacct
gttgttgtcaaccgacagccctatgaagtggaacaatacagaaatgaaaaggaaatcaca
cttagaggaaagaacattcccaaccccattcaatacttcactgactacaatttcccagac
tatgtaatggctgaaatccgtcgacagggctatgaagcacctacacctattcaggcacaa
ggctggcctatttcattacaaggaagggactttgttggtattgcacagaccggctcagga
aagaccctgggttacattttaccagccattgttcacatcaatcaccagccatatttggaa
aggggagacggccctattgcactcattttggctcccacaagagaacttgcccaacagatc
cttacagttgcacaagacttcggttcatcttcaaagatccgctccacatgtgtgtttggt
ggcgcacctaaaggaccacagattcgagacttggaacgaggggttgagatctgtattgcc
acaccaggacgtctcattgatttcttagaagcaggaaaaacaaaccttcgccgttgtaca
tatttagtacttgatgaggcagaccgcatgttggacatgggctttgaaccgcaaatcaga
aaaattgtagagcagatccggcctgaccgacaaactcttatgtggtctgcaacttggccc
aaagaggtgaggaatcttgccgaagacttcctaaaagagtacattcagcttaatgtaggc
tccctatccctcgcagccaaccacaacatcctccagattgtagatgtttgtcaagagatg
gaaaaagatacaaagctgcgccagttgctcaatgagatggcgcaagagagggcttacaag
acaataatctttatcgaaacgaagcggaaggtggaggatgttactcgtgggttgaggagt
actgggtggccagctatgtgtatccatggagacaaatctcaacaagaaagagactgggtt
ttaagtgaattccgttcagggcgggcaccaattttggttgccacagacgttgctgctcga
gggttagatgtggatgatgtgaagttcgtgatcaactacgactacccatcttgctctgag
gattacgttcaccgaattgggcgaactggacgctcagacaagacaggaactgcatacaca
ttcttcacagcagacaactgtaagcaggcaaaggatctgatcgaagtgctgaaggaggcc
aatcaagttgttaatccccggttatatgaaatcatggaaatgggacgcggtggtggaggt
aaaggccgcaatcgctggaggggacgtgatgatgacaggaggggtggttttggacgtgac
cgcgaccgcagccgtccgagtggcggaaggaacggctacaccaacggaaatggatatggt
acgtctcctcaagtgcttggaggatttaacaagtttggaggcggaggcagtaataatgcc
atggtgaatggggcggttgcaggccaggcacgttacaatgggccgcctccactcatgggc
tctggtgctgtgaaggcctcgagccaagcaggtactccaagccaattgaatggtacacaa
cgtccacccggccagagcatgggagccaacatggccatgggcatgttcaaccaggctgcc
tccatggctggtggtgtgggtggcctaggcatgatgggggccgtgcctggtgcactttcc
tggccgcggcagtga
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