Penaeus vannamei (Pacific white shrimp): 113814999
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Entry
113814999 CDS
T06111
Symbol
RanGAP
Name
(RefSeq) ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113814999 (RanGAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113814999 (RanGAP)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113814999 (RanGAP)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
CobT
eIF-3c_N
Cwf_Cwc_15
BUD22
Nop14
Paf1
BSP_II
YL1
DUF2457
CDC45
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
113814999
NCBI-ProteinID:
XP_027222887
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Position
32:29060041..29069838
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AA seq
564 aa
AA seq
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MDTTLSFAGQNNKWNTAEDVQAAAEAIRNHKDLRCLVLEANTLGVEAAKVMGDALAMHPE
FERAHWKDLFTGRLKTEIPEALRHLFSGLIRAGAKLKELDLSDNALGPVGVEGMVDFMSS
PVCYSLQELRLNNNGLGIKGGTMLAESLMRLVDNAKAAGTPLTLKVFIAGRNRLEKEGAK
VYAKFFKAVGTLEEVAMPQNGIFHEGIAALADAFSTNNNLRVVNLNDNTFTPKGAQAMAD
KLPMMQNLEVINFGDCLIKTAGAKMIAKALTSGHKNLRELFLDSNEINIKGGLAIAEAMA
DKENLDKLMLDCNQFGEDGREMLISLLNDLGQLEALDSLEDDEDPDSEEEEDDDDDDDDD
EDDEDEDEEEEEEEEVTQVRGSGVSPLKRGESVVIPVKCTAEEFCEQPTAARLLGLGNSG
PSQLVEEAKRLAEGSEEALINFCLKILMRTGSIATSNNAEVQKAVNAATEQLAKAAFTAA
QKSDSLSLATNSLLVHLGLIKCEDKKFKLEWDLKGCLIALATIVSSPLFPEQTKSTLQLF
LSKPNPKIDVHNQEKHKLMVALFQ
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacaccacgctgagctttgccggacagaataacaagtggaacacagctgaagatgtc
caggcagcagcagaagctattcgcaaccacaaggacttgcgatgtctggtactcgaggcc
aatacacttggtgttgaggcagccaaggtgatgggagatgcactagccatgcacccagag
tttgagcgagcgcactggaaggatctgtttactggtcgtttgaagactgagattcccgag
gccctgcgccacctgttctctggcctgatacgtgctggtgccaagctgaaggagctagac
ctgagtgacaatgcccttggccccgtgggtgtggagggcatggtggacttcatgtcgtca
cccgtctgctattccctccaggagctgagactaaacaacaatggacttggcattaaggga
ggcactatgcttgctgagtctctcatgaggctggtggataatgccaaagctgctggtact
ccactaactctcaaggtgtttatagctggtcgcaacaggcttgagaaagaaggtgccaag
gtttatgcaaagttcttcaaggctgtaggcactctggaagaagttgccatgcctcagaat
ggcatcttccatgagggaattgcagctcttgcagatgctttcagtaccaacaacaacctc
cgtgtagttaacctcaatgacaacacctttacccccaagggtgcccaggcaatggcagat
aaattgccaatgatgcagaatttagaagtgatcaattttggagactgcctcatcaaaaca
gctggagccaagatgattgccaaagccttaacttcaggacacaagaatctgagggagctg
ttcttggacagcaatgagattaacatcaaaggtggactagcaatagcggaagccatggca
gataaagagaacttggacaaactcatgctggactgcaatcagtttggtgaggatgggcgg
gaaatgctcattagccttttgaatgacttgggtcagttagaggcccttgactcccttgag
gatgatgaggatccagatagtgaggaagaggaagatgatgatgacgacgacgatgatgac
gaagatgatgaggatgaggatgaagaagaggaggaagaagaggaggttacacaggtccgt
ggatctggagtaagccctctgaagcgtggcgagtctgttgtcattccagttaagtgtact
gcagaagagttctgcgagcagccaacagcagccagacttcttggtttggggaactctggt
ccttctcagttagttgaagaggctaaaagattggcagaaggaagtgaagaagccttgatc
aacttctgcttgaagatcttaatgcgaactggatcaattgccacatctaataatgcagag
gttcagaaagcagttaatgctgctacagagcagctggctaaggcggcatttacagcagcc
cagaaaagtgattcactctccctcgctacaaatagtcttctggtccatttgggactcatt
aaatgtgaggacaagaaattcaaattggaatgggaccttaaaggatgcctgattgccctg
gcaacaattgtgtcatcaccactcttcccagagcagacaaagagcacattgcagcttttc
ctgtcgaaacctaacccgaagatagatgtccacaatcaggagaaacacaaacttatggta
gcactctttcaatga
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