Penaeus vannamei (Pacific white shrimp): 113815009
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Entry
113815009 CDS
T06111
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113815009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113815009
Enzymes [BR:
pvm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
113815009
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
90S particles
Other 90S particles
113815009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
LHC
Motif
Other DBs
NCBI-GeneID:
113815009
NCBI-ProteinID:
XP_027222893
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All DBs
Position
13:16709196..16722133
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AA seq
245 aa
AA seq
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MGKKRRHQEVVEESEEDNPQIKEETTIGDKKFNEFDVKNVGQRLIVVLERANLESVKNGK
NYELLNCDDHMGMMKKFKKDPADCRPDILHQCLLMLQDSPLNQAGKLQVYIHTEKNVLIE
VNPQCRIPRTFKRFAGLMVQLLHKMSVRASDGSMKLLKVIRNPVSDHFPPGIKKIGTSFQ
AKNLVNPRSLVPPKESLVVVIGAMAHGKVEVDYTEEEVSFSNYHLSAALACSKLCNGFEE
VWGIK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaaagaaggcatcaagaggtagtagaagaatccgaagaagataatccacag
attaaagaggaaacaacgataggtgacaagaagtttaacgaatttgatgtgaagaatgtt
gggcagcgtcttatcgtcgtgttggagagagcaaatttggagagtgtaaagaatggaaag
aactacgaacttctaaactgcgatgatcacatgggaatgatgaagaagttcaagaaggat
cctgcagattgccgtcctgatatccttcaccagtgtctcctcatgttgcaggactcgcct
ctcaatcaggcaggcaaacttcaggtgtacattcatactgaaaagaatgtccttatagaa
gtgaacccacagtgcagaataccaagaaccttcaaaagatttgctggtttaatggtccag
ttgcttcacaagatgagtgtacgggcttcagatggaagtatgaaactcctgaaggtgatc
cgcaacccagttagtgaccactttcctcctggtattaagaagatcggaacctctttccag
gccaagaaccttgtcaacccacggtcgcttgtccctccaaaggaatcacttgttgtggtt
ataggggcaatggctcatggaaaagtggaggtggactacacagaagaggaagtgtcgttc
tctaattatcatctctcagctgctcttgcctgttccaaattgtgtaatggctttgaggaa
gtgtggggtatcaagtaa
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