Penaeus vannamei (Pacific white shrimp): 113815317
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Entry
113815317 CDS
T06111
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
113815317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113815317
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
113815317
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Gene cluster
GFIT
Motif
Pfam:
XLF
FlxA
XAP5
Motif
Other DBs
NCBI-GeneID:
113815317
NCBI-ProteinID:
XP_027223209
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Position
13:complement(3878235..3883121)
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AA seq
289 aa
AA seq
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MTTPEAWRSLEEAAWGPMPSLGPEWMGKSSASDSGYLLMLTDGCGVWGERKTADYVLEKA
EEWAPCIEAGIKELSGLVLDEVKKLNVKVQWREDRKTMTLNLSSRLNDLAFKWIFTLNRL
SDDLFREHWSVPLVIQMHHMGMLIKQLNTDLKKKTEQLKELTPDSKNNKTVSKTKKKDVI
DASVEALMVEGNWTVLQDHLVNFPFIMKHLSSKRKRNFEESENSPGADASTIATNKGQVN
DKKKREEDEELERLEREKEKERRAQIQELQQGPPLTLSPNKKKKKKLNI
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccagaagcatggagatctttggaagaagctgcatggggcccaatgccgagt
ttagggccagagtggatgggaaagtcaagtgctagtgactctgggtacttattgatgttg
acagatggttgtggtgtctggggcgagaggaaaactgcagactatgttctagaaaaggca
gaagagtgggcaccttgcatagaagcaggtatcaaagaactgtcaggtttggttctggat
gaggtgaagaagttgaatgtgaaagtgcagtggagagaagacagaaagaccatgacccta
aacctctcatccagactcaatgatctggcatttaaatggatcttcacattgaacagattg
tctgatgatctgtttcgtgaacattggtcagtaccactagttatacaaatgcatcatatg
ggtatgttgattaaacagctgaatacagaccttaaaaagaagactgaacaattaaaggaa
cttacacctgatagtaaaaataacaaaacagttagtaaaactaagaagaaagatgtgata
gatgcctcagtagaagcactgatggtggaaggcaattggacagtactgcaggaccatctt
gtcaattttccatttataatgaaacatttatcaagcaaaagaaaaagaaattttgaagaa
agtgagaattcgccaggagctgatgccagtactattgctaccaacaaaggtcaagttaat
gacaagaaaaaaagggaggaggatgaagaattggagaggctggaaagggagaaagagaag
gaaaggagagcccaaatacaagaacttcaacaaggaccaccattaacactgtcaccaaat
aagaaaaagaagaagaaactgaatatttga
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