Penaeus vannamei (Pacific white shrimp): 113815625
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Entry
113815625 CDS
T06111
Symbol
tsu
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
pvm03015
mRNA surveillance pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113815625 (tsu)
09122 Translation
03013 Nucleocytoplasmic transport
113815625 (tsu)
03015 mRNA surveillance pathway
113815625 (tsu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113815625 (tsu)
03041 Spliceosome [BR:
pvm03041
]
113815625 (tsu)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113815625 (tsu)
Spliceosome [BR:
pvm03041
]
Complex C
Other components
EJC/TREX
113815625 (tsu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
113815625
NCBI-ProteinID:
XP_027223447
LinkDB
All DBs
Position
14:43538211..43543096
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AA seq
163 aa
AA seq
DB search
MADVLDIENAEEFEVDEDGDQGLVKLKERAKKRKGRGFGGEDRSEREDIHYEGMEVDGAD
DEPGPQRSVEGWILFVTGVHEEAQEDDIHDKFSEFGEIKNIHLNLDRRTGFLKGYALVEF
ETFKEAQAALDGLNGSVILGQTISVEWCFVKGPRKNKKERRRR
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttggacatcgagaatgccgaggagtttgaggtggatgaggatggcgac
cagggtcttgtcaagcttaaggagagggccaagaaacggaagggccgtgggtttggtggc
gaggaccgctccgagcgagaggacatccactatgagggcatggaagtagatggagccgat
gatgagccaggacctcagagatctgtggaaggatggatcctcttcgtcacaggtgttcat
gaagaggcacaagaagatgacattcacgacaaattctcagagttcggagagatcaaaaat
atccacctgaaccttgaccgtcgtacaggtttcctgaagggctatgcattggtagaattt
gagaccttcaaagaggcacaagcagctctggatggtctaaatggctctgtaatcctaggt
cagacaatctccgtggaatggtgttttgttaaagggccaagaaagaacaaaaaggagagg
aggagacgttga
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