Penaeus vannamei (Pacific white shrimp): 113816067
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Entry
113816067 CDS
T06111
Name
(RefSeq) DE-cadherin-like
KO
K27891
DE-cadherin
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pvm04515
]
113816067
Cell adhesion molecules [BR:
pvm04515
]
Cadherins
Cadherin related
113816067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Ig_Shg
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Cadherin_FAT4_N
Laminin_G_2
Cadherin_2
RibLong
Laminin_G_1
LtfC
hEGF
Ig-like_KY
EGF
Motif
Other DBs
NCBI-GeneID:
113816067
NCBI-ProteinID:
XP_069986274
LinkDB
All DBs
Position
15:18153810..18205181
Genome browser
AA seq
1655 aa
AA seq
DB search
MDRNGLIKYSVSDPEHFFVDEGGVLYNIKPLDFEHTNGKYVLQVTAEDQGEGIGSSKKYL
TPAPCSVFFLPDENTNKPVFKECSNYDQKSIQENMEAGSSVLIVIATDDDHGVNGEVEYS
FRNDYDSFAIETKLGQGYISTTQPLDRDDGEKEYYMTVIARDKAPTDWLLGACSFRIVVE
DVNDNPPIFDQATYMYKLPTDKAVGTEILRVTATDKDAGLNADVVYELEGEATDLAYFEV
DPDTGVIVLKKELNENMADQKTFSLTARAQDKGTPPMASTAPVTLDVVASGKQPPSIVSQ
STLTPRVAEDTQENTEVLYVCATSNIPGRPKVYFALLNGNTRDTNDDGSFDVRPLEDGDN
RCPADTNGASIYVALRNLDYEAITSYKLILQLVNEENSRHDEQILVEILDVNDNPPLLQP
YDGAVVENAEPALITTIQAVDKDATEAFRNLDFSFDEESVTQDVKDKFRLRTNGELSTLM
KLDRENASQYRVPVIVTDGEPSHVRRRTYWITVQDVNDEPPRFDVSSVVEVELPERTEVG
KDTGIKLVVLDPDVVNYNEFQIVEGNQYQKFRIDPTTGDVLVNQLLDYDAPTNDRNFTMK
VRLSDGANQPAETTITIAVTNDNDQQPVFIPSNYNFTITENVNCSIQIGKVTAIDPDLPS
TADQNIQYFLSTDDERNFTIAEKTGDLTLKGCLDREAATRGTMTLYPYAMDEGGNGLDAI
PAMVTININDMNDNHPYIQSPDNSFAVLMENREPGSPGHRVVIQLDDWDSDENGCPCTLS
FDQNTPSDIMQKFDVTGGASSQYELSPKVVLDREQQKVYRIPFRTKDRWGVSGTRILTLE
VGDENDSPMTDGESSISVYNYQGQFPDIVIGSVHVTDLDDHDVNDKIFELDPSSPSDGTF
FDVNLNTGNITMKKGTPEGTHTLRVKVTDTFRDETAFGTVHIHVVDLTEEAVMQSGSFRV
ANHTAYDIVKQSESGGASLYARLRQRIGQVHGIAAENVDVFGLKDVADGVDVRYNCHSSP
YYTAARLDGLMLAAREEIMADLGISIPLVDINSCLYESLSPCQEKSCQHTLRPNLTSPLV
VASDVTTMVGVDIADDYTCDCGALEPPHTVCHDGFCLNGGTCVEANQTLTCLCPDSANYG
PRCELTNARFERGYAWYEGPKVCDNSSFSMAFETRDPEGLLLYAGPMLTKPWQDYPKDFI
YVVLRDWILEAYLDLGTGTVVMKVSLEKNSARSFDFVLSWADDGISLEVPNCLGNSSSSA
TACKKTTPLPGTVSPSVLLNSPGPLQLGGVTAMPSFEQLAASYEWTIVPPVVLPFFGCIF
EVRYNDYLYDLNSTDYTKSTYLPCNAPTPAKVILGQQSIIIIVVSLLCLILLVLLILCLA
RRGKKTISHPELDGIVKETIGGTDLEGYGEKDMTQYDLKLLRVGPDGHLFNDTDPQKQPD
DSYQAQPILLHEDRRRPPDVVDDHRQDRMAPLAQMPDGLSIGDFINDNIKKVDKEPTDFD
DVRHYCFEGDEMSIASLSSIDSNGSTDSGSQAFDYATDWGPRFEKLNQIYRRDSDEEEDS
EFDFNIPKGRKRDTLPGGKPKSSSPAQPPADGAPGFSSGDAQRPGRPRDGPSVTFATPET
KGSREGLLPESPQRRDYHEAVNPMADLDEGAESWC
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaacggcctcatcaagtactccgtcagcgaccccgagcacttcttcgtggac
gaggggggcgtcctgtacaacatcaagcccctggacttcgagcacaccaacgggaagtac
gtcctgcaggtcacggcggaggaccaaggtgagggcatcggaagctctaaaaaatatcta
acccccgccccctgttctgtgttcttcctcccagacgagaacacgaacaagccggtgttc
aaggagtgcagcaactacgaccagaagagcattcaggagaacatggaggcggggtcgtcg
gtgctgatcgtgatcgcgaccgacgacgaccacggggtcaacggcgaggtcgagtactcc
ttccggaacgactacgacagtttcgccatcgagaccaagctcggccaaggttacatctcc
accacgcagccgctggaccgggacgacggcgagaaggagtactacatgacggtgatcgcc
cgcgacaaggcccccaccgactggctgctgggcgcctgctccttcaggatcgtcgtcgag
gacgtcaacgacaacccacccatcttcgaccaggcgacttacatgtacaagctgccgacg
gacaaggcggtcgggacggagatcctgcgcgtcacggccacggacaaggacgcggggctg
aacgcggacgtcgtgtacgagctggagggcgaggcgaccgacctcgcgtacttcgaggtc
gaccccgacaccggcgtcatcgtgctcaagaaagagctcaacgagaatatggcggaccag
aagaccttctcgctgacggcgcgggcgcaggacaaggggacgccgcccatggcctcgacg
gcgcccgtgaccctggacgtggtggcctcggggaagcagccgccctccatcgtcagccag
agcaccctcaccccgcgcgtggccgaggacacgcaggagaacaccgaagtgctctacgtc
tgcgccacctccaacatccccgggcggcccaaggtctacttcgcgctcctcaacggcaac
accagggacaccaacgacgacggctccttcgacgtcaggccgctggaggacggcgacaac
cgctgtcctgccgacaccaacggcgcctccatctacgtcgccctcaggaacctggactac
gaggcgatcacgtcctacaaactcatcctgcagctcgtgaacgaggagaactcccgccat
gacgagcagatcctggtggagatcctggacgtgaacgacaacccgccgctgctgcagccc
tacgacggcgccgtggtggagaacgccgagcccgcgctcatcaccaccatccaggccgtc
gacaaggacgccacggaggccttcagaaaccttgatttctccttcgacgaggagtccgtg
acgcaggacgtcaaggacaagttccggctgaggaccaacggcgagctcagcaccctgatg
aagctggacagggagaacgcgtcgcagtaccgggttcctgtcatagtcaccgacggagag
cccagccacgtccgccgccgcacgtactggatcacggtgcaggacgtgaacgacgagccg
ccccgcttcgacgtcagcagcgtggtggaggtggagctgccggagcgcacggaggtcggc
aaggacacggggatcaagctggtggtcctcgatcccgacgtcgtcaactacaacgagttc
cagatcgtggaaggcaaccagtaccagaaattccggatcgaccccaccaccggggacgtg
ttggtcaaccagctgctggactacgacgcgccgaccaacgacaggaacttcacgatgaag
gtgcggctctcggacggcgccaaccagcccgcggagacgaccatcacgatcgccgtcacc
aacgacaacgaccaacagcccgtcttcatccccagcaactacaacttcaccatcaccgag
aacgtcaactgcagcatccagatcgggaaggtgacggccattgaccccgacctcccgagc
accgccgaccagaacatccagtacttcctgtcgacggacgatgagaggaacttcaccatc
gcggagaaaacgggagacctcactctcaagggctgcctggaccgcgaggccgccacccgg
gggacgatgaccctctatccctacgccatggacgagggcggcaacgggctggacgccatc
cccgccatggtcaccatcaacatcaacgacatgaacgacaaccacccgtatattcagagc
ccggacaacagcttcgccgtgctgatggagaaccgcgagccagggagccccggccacagg
gtggtgatccagctggacgactgggacagcgacgagaacggctgcccctgcaccctctcc
ttcgaccagaacacgccctcggacatcatgcagaagttcgacgtgacgggaggagccagc
tcccagtacgagctcagccccaaggtggtgctggaccgcgagcagcagaaggtgtaccgc
atcccgttccgcacgaaggaccgctggggcgtctcgggcactcgcatcctcaccctcgag
gtcggcgacgagaacgactccccgatgaccgacggcgagagctccatcagcgtctataat
tatcagggtcagtttcccgacatcgtgatcggctccgtgcacgtcaccgacctcgacgac
catgacgtcaacgacaagatcttcgagctggacccgtcctcgccctccgacgggacgttc
tttgacgtcaacctcaacacgggcaacatcaccatgaagaagggcacgccggagggcacg
cacacgctcagggtcaaggtgaccgacaccttccgtgacgagacggccttcggcaccgtg
cacatccacgtggtcgacctgacggaggaggcggtcatgcagtcgggttccttccgcgtc
gccaaccacaccgcctacgatatcgtcaagcagagtgagtccggcggcgccagcctgtac
gcgcgcctccgccagcgcatcggccaggtgcacgggatcgccgccgagaacgtggacgtg
ttcggcctgaaggacgtggcggacggcgtggacgtgcgctacaactgccacagctcgccc
tactacacggcggcgcgcctcgacggcctcatgctggccgcgcgagaggagataatggcc
gacctgggcatcagcatcccgctggtggacatcaacagctgcctgtacgagtcgctgtcg
ccgtgccaggagaagtcgtgccagcacactctgcgtccgaacctgacgtcgccgctggtc
gtggcgtctgacgtcaccacgatggtcggggtggacatcgccgacgactacacgtgcgac
tgcggcgccctggagccgccgcacacggtgtgccacgacggcttctgcctcaacggcggc
acctgcgtcgaggccaaccagacgctgacgtgtctgtgccccgacagcgccaactacggc
ccgcgctgcgagctcaccaacgcgcgcttcgagagaggctacgcgtggtacgaggggccc
aaggtgtgcgacaactcgtccttctcgatggccttcgagacgcgggaccccgagggcctg
ctgctctacgccggccccatgctgaccaaaccgtggcaggactacccgaaggacttcatc
tacgtggtcctcagggactggatcctggaggcgtacctcgacctcggcacgggcaccgtc
gtgatgaaggtcagcctcgagaagaacagcgcgcgctccttcgacttcgtgctctcgtgg
gccgacgacggcatcagcctggaggtccccaactgcctcggcaacagcagctcctccgcc
accgcctgcaagaagaccacgcccctgcccggcaccgtcagccccagcgtcctgctcaac
tcgccggggcccctgcagctggggggcgtgacggccatgccctccttcgagcagctggcc
gcctcctacgagtggacgatcgtgccgccggtggtgctgcccttcttcggctgcatcttc
gaggtccgctacaacgactacctctacgacctcaactccaccgactacaccaagtcgacg
tacctgccgtgcaacgcccccacgcccgcgaaggtcatcctgggccagcagtcgatcatc
atcatcgtggtcagcctgctgtgcctcatactgctcgtcctcctgatcctgtgtctggcg
cgtcggggcaagaagacgatatcccaccccgagttggacggcatcgtcaaggaaaccatc
gggggcactgacctcgaaggctacggcgagaaggacatgacccagtatgacctcaagctg
ctgcgggtcggaccggacggccacctgttcaatgacacggaccctcagaaacaacccgac
gattcataccaagcccagccgatactgttacacgaggaccgccgccgccctcctgacgtg
gtggacgaccaccggcaggaccgcatggcacccttggcccagatgccggatggtcttagc
atcggggacttcatcaacgacaacatcaagaaggtggacaaggagccgactgatttcgat
gatgtccgccactactgcttcgagggagatgagatgtccatcgcctccctgtcttccatc
gactccaacggctccacggacagcggcagccaggccttcgactacgccacggactggggt
cctcgcttcgagaagctcaaccagatctaccgccgcgactcggacgaggaggaggacagc
gagttcgacttcaatatcccgaaggggcgcaagagggacacgctgcccggcgggaagccc
aagagctcctcccccgctcagccccctgccgacggcgcccccggcttctcttctggcgac
gctcaacggccggggcgccctcgggacgggccctcggtcaccttcgccacgcccgagacg
aagggcagccgggagggcctgctgccggagtcgccgcagcgccgggactaccacgaggcc
gtcaaccccatggcggacctggacgagggcgccgagtcctggtgctag
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