Penaeus vannamei (Pacific white shrimp): 113816551
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Entry
113816551 CDS
T06111
Symbol
Gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvm04131
]
113816551 (Gapvd1)
Membrane trafficking [BR:
pvm04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
113816551 (Gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
113816551
NCBI-ProteinID:
XP_027224383
LinkDB
All DBs
Position
28:16592731..16615434
Genome browser
AA seq
1579 aa
AA seq
DB search
MGSLQADIGELAHHLKQERLFLEAEKQQIQILNEKVVKTIERVYQASWVRGEQQRNYDDL
VLRPHSSPPACCQRANLLNQLKFIDGYKVLGFNESLYGDLLSSLRDNPRLVAKCLVLGEN
QNQEAMQVAAGTMFSSVYGNCLLPDDETLVLNLLKHLMELQLAVSETPRRLLRRGSCAFS
QIYRSYVDTLPQAKVFLTAALHQPVMQLLMEDELFLDIDPAKAAVRFPPEERLRRFGQEG
TPEYTAALAKYRAWTIAKLVKIANRFMESIKEAMNCFPPQLSWLVRVLYDVLLTAKRADT
REVSAICVDLVFALFLCPALISPEPHGICDAPISHISRFNLIQVAQILQVLAMSRWETPD
SRLSDLYSNFDKEVISGVVDSIVEGGGSEAPPPGISCLNSPLSTLVRSSILIPEPRLHSL
VSFLFSILGELPEDDITRKELEAAIGRLKPSHITPPPTASQSGAPSASSATPKKNLLGRV
KSNRNRSSKSASEGSGDSDSIGSAQDSTTSSSQLPAQGSIDEGEVMPASLDYDTVLVISL
NVSSPPECPGLMSEEKVLSTLQVSGPPLQATKPTSRVRMNVEDDADGGGGEATIEKRTRF
SLSHDEGSIGNTSDNLEAISEAASNHSVASSLDDVEQEDQPDNLSDMVSANVSGRGTPNV
SGRDTPSSQVTEGEEVGLRGGAENHPPAANIPVTVPKPARADIEEKFGRFEIKPLIGGDE
TVSLVSDTWSTDVLASDSETIEAADRADRGDQFHDQLLNRHLAELDRMQGDYLSGDAAGE
TFETASEAWSTDVLASDSERMTEFDTDDAQSVARSDDTGRSEVEVELGGSDLLRPEPLNQ
QEDNITPRAQGSRSPVEGAFGGGSSSGILKPMPVLPPSLGLESGTSTPSGILKPIPIIQN
RAGRPATPPRVEFQPIRHAEDIDRPESEEPEGEMSQADQEIASATQSLGRLSLNLSTLPN
NGIVSGDQHLLLNTFIGESSRTVTTAPLIDLGSSGESSHMVAPVVVHPHHKLVSSDRGSG
EDSSLHLSTTSLASSSSSGSDVVGGSGKIRSASNASSGPTTDSVDTPEPVAPPVSMAATG
AIPKSISFDKTAERGDRDSMEGDAKHKRGFFKNFKLPGFKGRRKPGTRSGDDSSFMRAGM
AGQEINMRRTLSEDNRPPTIEETSDDILAKYRKKPEVDTSETDGISGVEHNLQVNDIPKT
EEDERLFIDPNNIESSYAFTDAKRKLRLVLSIADFSMSPYLPEFGAPTGSDGTSLDSDVL
TWLRCQLAEATNLHDRSLVAQLHETIRCVQLFDTQGRERLVRSLTEDYRSRSPYVAYLVR
SRQGLLTTIAHLDKLLARIDADTEVVMSSIVGVCVRMFLERREHNLSRFTHEFTVLTVPD
EKVQLVENFLSQLYNELERDPMWISSTNDQLNAARLALERVVMSHIYIHALYPNGDGDVS
RDQVLHEHMKKLSAVITPAHKDLRIPKLYQYECPWPSAQAEIICISAYKTAGDKLQCVVR
ASQTIMNLLSLAHEQSVPAADDFMPVLVYVLIKANPPALLSTAQYVNLFFEQRLKGEDQY
WWTQFCAAIEFIKTMDYTL
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtcttcaggctgacataggggaactagcacaccacctgaagcaagaacgccta
ttcctcgaggctgagaaacaacagatccaaatattaaatgaaaaggttgtgaagactata
gagcgagtgtaccaggcatcctgggtccgtggcgagcaacagagaaactacgatgatctc
gttctgcgacctcattcctcccccccggcgtgctgccagagagccaacctccttaatcag
ctaaagttcattgatggatacaaagtgctgggattcaatgaatctctatatggagacctc
ttgtcaagtttacgtgataatccaaggctagttgcaaaatgcttggttttaggggaaaac
cagaaccaggaggccatgcaggtagccgcgggaaccatgttctcgtcggtgtatggcaac
tgcctcctgccagatgatgaaacattagtgctgaatctgctgaaacatttgatggagcta
cagcttgccgtctcagagactcctcgacgtttgctgcgacgtgggtcctgtgcattcagc
caaatctatcgttcatatgtagacacgcttcctcaggccaaggtatttctaacagcagca
ttacaccaaccagtcatgcagctcctgatggaagatgaactgtttcttgatattgaccct
gccaaggctgcggttcgcttccccccagaggagcggcttagaaggtttggtcaagaaggc
acacccgagtacacggctgctcttgctaaataccgagcctggactattgccaagcttgtc
aaaattgcaaacaggttcatggaaagcattaaggaagcgatgaactgcttccctccccaa
ttatcgtggcttgtaagagtgctgtacgacgtgctcctaacggccaagagagctgacacc
agagaggttagcgcaatatgtgtggacttggtctttgcactgtttctctgtccagccctc
atctcgcccgagccacacggaatctgtgatgcaccgatctcccacatttccaggtttaat
ctcattcaggttgctcagatactgcaggtgctggcaatgagtcgctgggaaacgccagat
agcagactctctgatctgtactcaaactttgacaaagaggtcatatcaggtgttgtggac
agcatcgtggaagggggagggtcagaggcccctccaccaggtatctcttgcctcaacagt
cccctgagtaccttagtccggtcgtcgatattgatcccggagcctcgtctacattcactt
gtctcattcctttttagtatacttggggaattgcccgaagatgatattacacgtaaagaa
ctggaagcagcaattggccgcttgaagccaagccacatcactcctcctccaactgcatct
caatctggagccccctcagccagttcagccacacccaagaaaaatctgttagggagagta
aaatctaataggaatagatcaagcaagagtgcaagtgagggcagtggtgactctgattcc
atagggtcagcacaggactctaccaccagttctagtcagctccctgctcaaggcagcatt
gatgagggcgaggtgatgcctgcctccctagactacgacactgtccttgtgatatccctt
aatgtctccagcccaccagagtgcccaggcctcatgtctgaggagaaggtcctctctaca
ctgcaggtttctggcccccccctccaggcaaccaaacctacctcccgcgtcagaatgaac
gtggaagatgatgcggatggaggtggaggagaggccaccattgagaagcggacacggttt
tccctctcccatgatgagggttccatcggtaatacttcagacaacttggaggctattagt
gaagctgccagcaaccatagcgtggcttccagtcttgatgatgtggaacaggaggatcaa
ccagacaacctgtctgatatggtgtctgccaatgtttctggacgaggaacgccaaatgtg
tctggccgcgacactccttcctcccaggtgactgaaggggaggaagttggacttagaggt
ggagcagagaatcacccaccagcagccaacatcccagtgacagtccccaaaccagcaaga
gcagacattgaggagaagtttgggagatttgaaattaagcctctcatagggggtgatgaa
acggtatcgcttgtgtcagacacatggagtactgatgtgttggctagtgattctgagacc
attgaggcagctgacagggcagaccgtggggaccagttccatgatcagctgctaaatcga
catttagcagaattggacaggatgcaaggagactacctcagtggagatgcagctggagag
acctttgagacagcctcagaggcttggagcacagacgtcctggcctcagactcagaaagg
atgactgagtttgacaccgatgatgcacagagtgtggctcgatcagatgacactggacgg
tcagaagtggaagttgaacttggtgggagtgacttactaaggccagaacctttaaatcaa
caagaggataacatcaccccacgtgcacagggttcacgatcccctgtggagggagctttt
ggtgggggcagcagcagtggtattttaaaacccatgcctgttttacccccatccttaggt
ttagaatctggaaccagcacacccagtggcatcctgaagcccattcccataattcaaaat
agagcaggaagacctgcaacaccaccaagagtagaatttcagccgattcgccatgcagaa
gacattgaccgaccagagtcagaagagccagagggtgaaatgtctcaggcagatcaggaa
attgcttcagccactcagagtctgggacgcctgagcctaaacctttcaacattaccaaac
aatggcattgtgtctggagaccaacacctgttgttgaacacctttattggggagagtagc
agaaccgtaacaactgctccccttattgacttgggaagtagtggtgagagcagccacatg
gttgctccggtggtagttcatcctcatcacaagcttgtgtccagtgacagaggctcaggg
gaggatagcagcctacacctaagcactaccagcttagcctcatcaagcagctcaggttcg
gatgtggttgggggctcaggtaaaataagatcggcttccaatgctagctcaggcccaacc
acagactcagtagacacaccagagcctgttgccccacctgtcagcatggcagccacagga
gcaataccaaaaagtattagttttgacaagacagctgaacgaggggatcgtgattccatg
gagggagatgcaaagcacaagcgaggcttttttaaaaactttaagctgccagggttcaag
gggcgccgcaaaccaggcactcgctcaggtgatgattcatctttcatgcgtgcgggaatg
gctggacaggaaattaacatgagaagaactctctctgaagataacagacctccaaccatt
gaggaaactagtgatgacattctagccaagtataggaagaagccagaggtggacacatct
gaaaccgatggtatttctggtgtggagcataatttgcaagtgaatgacattccgaagacg
gaggaggatgagcgtcttttcatagatccaaacaacattgaatcaagttacgcattcaca
gatgccaagagaaagttgagattagttctgagtattgcagatttctccatgtccccatat
ctccctgaatttggtgcgccaacaggttcagatggcacaagcctagacagtgatgtacta
acatggttacggtgccagctggccgaggcaaccaaccttcatgatcgatccctggtggct
cagctacatgaaacaattcgttgtgttcagctctttgatactcagggtcgcgaaaggctg
gtcagaagtttgacagaggactaccgcagcaggtcaccgtatgtggcatacctagttcgc
agcagacagggactactgactacgattgctcatctggataaactccttgcaagaatagat
gccgacacagaagttgtcatgtcgtctattgttggagtatgtgtgagaatgttccttgag
cgccgggaacataacctgagtcgcttcacacatgaatttacagttctgactgtcccagat
gaaaaagttcaactggttgaaaattttctgtcacaactttataatgaactggagcgagat
ccaatgtggattagtagcactaacgaccagctaaatgcagcacgattagctttggaaaga
gtcgttatgtctcatatctacatccacgctctctatcctaatggggatggagatgtatct
cgtgatcaggttcttcatgaacacatgaagaagctgtctgcagttatcacaccagctcac
aaagacttaagaatacctaagctataccagtatgagtgtccttggccgagtgcgcaagcc
gaaataatctgcatcagtgcttacaagactgcaggtgacaaactccagtgtgtggtgagg
gcttcccagaccattatgaatttactttctctagcacatgaacagtctgttcctgctgca
gatgacttcatgcctgtccttgtatatgtccttataaaagcaaacccaccagcactttta
tcgacggcacagtatgttaatttattctttgaacaacggttgaagggggaggatcagtat
tggtggacacagttctgtgctgccattgaattcatcaagacgatggactacacactctga
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integrated database retrieval system
