Penaeus vannamei (Pacific white shrimp): 113816594
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Entry
113816594 CDS
T06111
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113816594
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113816594
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113816594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
113816594
NCBI-ProteinID:
XP_027224437
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All DBs
Position
39:12071318..12095299
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AA seq
287 aa
AA seq
DB search
MFESLYLRKTMVACFRVIFYFRIVYLFLLTYEAVSPEFTLMEGGAHGGESTIAGLLLTLG
TPAAVVVAVVAGFCLAKLQPTSQKRHLIESEQEPGSRMVRVRRSASDNDCPICMDPAKFA
VETNCGHMYCSKCIILNWRTNFTMSPMSCPFCRQEVTILLPCFSEGETNTTDRAEVQEKE
RQMSDIQEYNRMYSKHPRSLYGQLQDLPTILRHIWAELFTWRGVEMISRFRVLICIITAI
IYAIMPIDLIPEAFVGLLGLIDDVIVIAFLLIQVSVVYRTVVANRDW
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaagcttgtatttgcggaaaactatggttgcatgttttcgcgtaatattttac
ttcagaattgtttatttatttctgttgacatacgaagcggtgtccccagagttcacttta
atggagggaggtgcgcatggtggtgaaagcacaatagctggcctgcttctgacgttagga
acaccagcagcagttgtcgtagctgttgttgctggattctgcttggcaaagctccagcca
acatcacagaagaggcacttaattgagtcagaacaggagccaggatcaagaatggttcga
gtgcggagatcagcttcagataatgattgcccaatctgtatggatccggcaaagtttgcc
gtggaaactaattgtgggcatatgtactgctcaaaatgcattatcctgaattggagaacc
aacttcacaatgtcacccatgagttgtccgttttgtagacaggaggtgaccatacttttg
ccgtgtttctcagaaggagagacaaatacgacagatcgtgctgaagtacaagagaaagaa
aggcaaatgtctgacattcaggagtacaacaggatgtattcaaaacatcccagatcactc
tatggccagcttcaggacctcccaacaatcctgcggcacatctgggcggaattgttcact
tggcgtggtgtggagatgatctcccgcttcagagttttgatatgcataatcacagccatc
atttatgccatcatgcccattgatctcatccctgaagcctttgttggcctcttggggctc
atagatgatgtaattgtcatagcttttttgttaatacaagtcagtgttgtttatcgcact
gtcgtggccaatagggattggtaa
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