Penaeus vannamei (Pacific white shrimp): 113816604
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Entry
113816604 CDS
T06111
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113816604
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvm01002
]
113816604
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113816604
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113816604
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113816604
Peptidases and inhibitors [BR:
pvm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113816604
Ubiquitin system [BR:
pvm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113816604
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
113816604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
113816604
NCBI-ProteinID:
XP_069972316
LinkDB
All DBs
Position
38:complement(1115078..1124209)
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AA seq
582 aa
AA seq
DB search
MTALDNMGEGSTQGSGKSSRLSLRQGRKRALNSDISPAPEPRTSHRFRTSSSSDTDDRNK
TPPMLRKMSLGRNATNSSSRRTSGGSSQASGSLGTSTGELGNGGGRVTGVCPLANLGNTC
FLNSVLYALRFLPGFTHDLHHLHMHLQAAGNQSDANLDQRIQFLSELHRVFVSLGQEERG
LSESKRIPAFQPYDFLEALRVVNPMFEGNRQQDAHELLHCLLDQLCHLPQDLRQGKPNGV
LGPEASKMEQEEEPGFPEPKRLRRRSERIQAIEEDSSKLPCSSPQAVDVVGSKFVGRMCL
ETCCSECEQVTGREENFLEVCVPVKTKADFDEDENVSEPQVFMSALCEEECLRDNNKYWC
DHCFHHNEARRSVHYSQLPHHLVIHVKRFSSYHRNMFTAKCSEAMPAPLELSCFCRSCLT
EQIKKQALMELARDDKGSKPSSSSKLSSGHLPYHLTAVVCHLGATLSSGHYLSFVRLSAL
DSSRCPEQQVAPPSQPVFSQPVSSTKVECQWIKCCGLQLDHIRPLSGLNGHMDIEEDGKS
SERESLWLECDDEKIKLVSAAEVSDMMRTTIITPYLLFYSRL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgctggacaacatgggagagggctcgactcaagggagcggcaagtcgtcgcgt
ctgtcgctccggcaaggtcgcaagcgagccctcaactcagacatctcgccagcaccagag
cccagaaccagccatcgctttcgcacctccagctcaagtgacactgacgacagaaataag
acaccaccaatgctgcgcaaaatgagcctggggaggaatgcgacaaacagcagcagtcgg
cgtacaagtggaggctcctcccaggccagtggaagccttgggacaagcacaggagaatta
gggaatggtggaggccgggtcacaggagtttgtcctcttgccaacctgggcaacacctgc
ttcctcaactcagtcttgtatgccctgaggttcctcccaggcttcacccatgacctgcac
catcttcacatgcacctccaggccgcaggcaatcagagcgatgccaacctagatcagcgc
attcagttcctgtcagagttacatcgggtcttcgtgagtcttggtcaggaggagcgagga
ctgtcagagagcaagcggattccagccttccagccctacgattttttagaagctcttaga
gtggtaaacccaatgtttgaggggaaccggcaacaggacgctcacgagctgcttcactgc
ctcctggatcagctgtgccacctgcctcaggacttacgtcagggcaagcctaatggggtg
ttggggccagaggcatccaagatggagcaggaggaggagccagggttcccagagcctaag
agattgcgccgcaggtcggaaaggattcaggcgatagaggaggactccagcaagttaccc
tgttcctctccgcaggctgttgatgttgtaggctcaaaatttgtaggccgaatgtgcctt
gagacatgctgctcagagtgcgagcaggtgacaggccgggaagagaatttccttgaggtc
tgcgttcctgtcaagaccaaggctgactttgatgaggacgaaaacgtgagtgaacctcag
gtatttatgtcagcactgtgtgaggaggaatgtctacgcgacaacaacaagtactggtgt
gatcactgtttccaccacaacgaggcacgtcgctcagtccactactcccagttgccacac
catcttgtcatccatgtcaagcgctttagctcctaccacaggaatatgtttactgccaag
tgcagtgaggccatgccagcacccttagagctgtcctgcttctgtcggagctgcctcacg
gagcagatcaaaaagcaggctctgatggagctggccagggacgacaaagggtccaaaccc
agttccagtagcaagctcagttcaggccacctgccataccacttgacagcagttgtctgc
cacttgggtgccaccctctcctcaggacactacttgtcttttgtgcgtctgagtgcacta
gactcatcaagatgcccagagcagcaagttgcaccaccttcacagccagttttttcacag
ccagtaagcagcaccaaagtggagtgtcaatggatcaaatgttgtggtctgcagctcgat
cacatacgtccactgtcaggactgaatggccacatggacatagaggaggatggcaaaagc
agtgagagggagagtctgtggcttgagtgtgatgatgagaagatcaaacttgtaagtgca
gcagaagtgagtgacatgatgcggaccactatcatcaccccgtaccttctcttctactca
cgcctctga
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