Penaeus vannamei (Pacific white shrimp): 113816797
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Entry
113816797 CDS
T06111
Name
(RefSeq) RNA-binding protein NOB1 isoform X1
KO
K11883
RNA-binding protein NOB1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113816797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113816797
03051 Proteasome [BR:
pvm03051
]
113816797
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
113816797
Proteasome [BR:
pvm03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113816797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
DZR_2
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
113816797
NCBI-ProteinID:
XP_069988761
LinkDB
All DBs
Position
18:complement(2681005..2701334)
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AA seq
618 aa
AA seq
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MKAKYLVADTAAFVKNVPLWEYGEEICSTPEVIGEIRDRHTKQHIQSLPVKIELKQPKPE
SIKFINEFSKKTGDFASLSLADIKVLALTYELEVEVQGGSGHLRSEPEKTVTEYSKPKKI
TDDALKLPGFYYPSEQQSEGNVVNSTSSISSEESGTDKGEESTPQYCSPSLHPSVYTSKA
PDICWRHMIGLESFLKDNSYIHGYFPTIQDWKFYTTLTKDYPQFYPSHKGFRKYQIPFAK
NVCPLQSTFPHIWRWAKHISTFSEKERETFPTAERSLADILRDFGERAENMEEECQQIKN
QVPLDIGSISIDENVKQSDSVGEDGDSEKEKGEQELDEEEEEEDEDEDEEEEYVYEEYCE
DDERIDSEQHNGDEDYDEDQTEEISEDYVNAEEGAGDEEEDDDAGGWITLSNVKKHKMKK
IGLKPEEEIEEKEVLVACMTADFAMQNVLKHIGLRVMGVDGKLIQQVRTFILRCHACFKT
TSIMNRTFCQKCGNKTLKKVSVTLNPDGTKKIWVNTKRPINIKGTKFSLPMPKGGKHARY
PILAADQKEAKKHASKLSYKKINPLHVDFDTLNSPFAVRDVYSRASQLGYIAGKKNHQLY
WEKKNPNEGRRTVGKRKK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaagtacttagtggcggatacagcggcatttgtcaagaatgtcccgctatgg
gaatatggggaggagatatgcagtacaccagaggtgataggagagatacgagacagacat
acaaagcaacacattcaatccctgcctgtgaagattgaactgaagcagcctaaaccagag
tccatcaaattcattaacgagttctcaaaaaagacaggagattttgccagtctctcacta
gctgatatcaaagtactagccctcacatatgaattggaagtagaagtacaaggaggttca
ggccacttgcgctctgaacctgaaaagacagtcactgaatatagcaagccgaagaagatt
acagatgatgcactaaaattacctggattctattacccatcagagcagcagtccgaagga
aatgtggtaaactccacttcctctatttcttcagaagaaagtggaacagataaaggagaa
gaaagtactccacagtattgctccccctctctccaccctagtgtgtataccagcaaagcc
ccagacatatgctggcggcatatgataggtcttgaaagctttcttaaagataatagctat
atacatgggtattttccaacaattcaagactggaagttctatactactcttacaaaagac
tatcctcagttctatcccagtcacaaaggcttcaggaagtatcagattccttttgcaaag
aatgtgtgcccccttcagtctaccttcccccatatttggaggtgggcaaaacacatatct
acgtttagcgagaaagagagagaaacatttccaactgctgagaggtcactagcagacatt
cttcgggactttggagaaagagcagagaacatggaagaagaatgccaacagataaaaaat
caggtacctctagacataggttccatctccattgatgaaaatgttaagcagtcagacagt
gttggggaggatggtgactcagaaaaggagaaaggagaacaggaactagatgaagaagag
gaagaggaggatgaggatgaggatgaggaggaagagtatgtatatgaagaatattgtgaa
gatgatgaaaggatagattcagagcagcacaacggggatgaagattatgatgaagaccaa
actgaagaaatcagtgaagattatgttaatgcagaagaaggagctggcgatgaagaggag
gacgatgatgctggaggatggattactctctccaatgtcaaaaaacataagatgaagaaa
attggattgaagcctgaggaggaaatagaagagaaggaagtccttgttgcttgcatgaca
gctgactttgccatgcagaatgtcctgaaacatataggcttaagagtgatgggagtcgac
ggtaaactgatacagcaggtcaggactttcattctgcgatgccatgcatgcttcaagacg
acaagcatcatgaacagaacattttgccaaaagtgtggtaataaaactctaaagaaagta
tcagtaaccttgaaccccgacggcacaaagaagatttgggtcaacaccaagagaccaatc
aacattaaaggaacgaagttctcccttcccatgcccaaaggaggcaaacacgcaagatac
ccaatactcgctgctgatcagaaggaagccaagaaacatgccagtaaactaagttataag
aagatcaacccactccacgttgactttgatactttaaattcaccctttgctgtgcgtgat
gtttactcgcgtgcttcacaactaggttatattgctggtaagaagaaccatcagctgtac
tgggaaaagaagaatcccaatgaaggaagaagaacagtaggaaaaagaaaaaaataa
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