Penaeus vannamei (Pacific white shrimp): 113816887
Help
Entry
113816887 CDS
T06111
Symbol
Dbp80
Name
(RefSeq) DEAD-box helicase Dbp80
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
pvm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113816887 (Dbp80)
03015 mRNA surveillance pathway
113816887 (Dbp80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113816887 (Dbp80)
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113816887 (Dbp80)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113816887 (Dbp80)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113816887
NCBI-ProteinID:
XP_027224675
LinkDB
All DBs
Position
6:complement(13432489..13450993)
Genome browser
AA seq
481 aa
AA seq
DB search
MSDDWAKAAEEQEAKDLASKVQTLSIPEDASNAKPAAATEAAEETPSEASTEEALTAAEE
SLMRKVMRKGIIESKNNVEVYRKDPNNPLYSVKDFEALNLRKELLDGIYDMGFKLPSKIQ
ETALPTLLADPPVNMIAQSQSGTGKTAAFSLAMLSRIDPKKRCTQALCLSPTLELALQTL
ESITKMGMKCTDISIRAAVKGETVARGQSVNEHIVVGTPGKVLDWVKKYKCLDLSQCRVF
VLDEADVMIATQGHQDQSVRIHKHLPSSCQMMLFSATYEDQVVEFAEAIIPNPVIIRLHR
NEETLENIRQMYVECKNEEEKYLAISNIYTIPVGNSMFFCHTKRSASSLASRLKQDGHQV
ALLTGDLTPDERVRVLTRYREGQERVLICTNVLARGIDVESVNLVVNYDLPVKPGSREAD
CETYLHRIGRTGRFGKTGNAINIVEGRSDILILKEIESHFNIKIAKLDYNNVEEIEKLGE
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgactgggctaaggctgcggaagagcaagaggccaaagatctcgcctcgaag
gttcagaccctaagcattccagaggatgccagtaatgcaaaaccagctgcagccacggag
gctgctgaggagacaccaagtgaggcctccacagaggaggcactcacagcagctgaggag
tccctcatgcgcaaggtgatgcgcaagggcatcatcgaatccaagaacaatgtggaagtt
tatcggaaggatcccaataacccactctactctgtgaaggattttgaggcattgaacttg
cgcaaggagctgctggatggcatatatgatatgggcttcaagttgccctccaagatccag
gagacagctctgccaacacttcttgctgacccgcctgtgaacatgattgctcagtcacag
tcagggacaggcaaaacagcagccttctcactggctatgcttagtcggattgacccaaag
aagaggtgcactcaggccttgtgcttgtcccccacactggaactggcccttcagacactg
gagtcaatcaccaagatgggcatgaaatgcactgatatctccatccgtgccgctgtgaaa
ggagaaacggtggccagaggacagagtgtgaatgagcacattgtggttgggaccccaggt
aaggtgctggactgggtcaagaagtacaagtgcctagacctgagccagtgcagggtgttc
gtgttggatgaagctgatgtcatgattgccacccagggacatcaggaccagtcagtgcgg
atccacaagcacctaccctcctcttgccagatgatgttgttttcagctacgtatgaggat
caggtggtggaatttgctgaggccatcatacctaacccagtcatcatccgtctccacagg
aatgaggagacattagagaatattcgtcagatgtacgtggagtgtaaaaatgaggaggag
aaatacttggccatctcgaatatctacaccatcccagttggtaactccatgttcttctgc
cataccaagcgaagtgctagttccttggcctcacgtttgaagcaggatggccaccaggtt
gcactgctaacaggtgacttaacaccagatgaaagggtcagagtacttactcgttaccgt
gaggggcaagagcgtgttctcatctgcaccaatgtccttgctcgtggtattgacgttgaa
tcggtcaacttggtagtgaactatgacctgccggttaagcctggctcacgagaggctgat
tgtgagacctacctccaccgcatcggtcgcacaggaaggttcggcaagactggcaatgcc
attaacattgtggaaggacgcagcgacatcctcatcctaaaggagattgagagccacttc
aatattaagattgcgaagttggactacaacaatgttgaagaaattgaaaagcttggagaa
gactag
DBGET
integrated database retrieval system
