Penaeus vannamei (Pacific white shrimp): 113817053
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Entry
113817053 CDS
T06111
Name
(RefSeq) RNA polymerase II subunit B1 CTD phosphatase Rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvm01009
]
113817053
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113817053
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
113817053
Protein phosphatases and associated proteins [BR:
pvm01009
]
HAD phosphatases
Fcp/Scp phosphatases
113817053
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
113817053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
113817053
NCBI-ProteinID:
XP_027224855
LinkDB
All DBs
Position
34:complement(7799319..7813785)
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AA seq
745 aa
AA seq
DB search
MMADISKKTTGMESKNVQKSSRRLESFIATSELAKAARSRAQAAFYRLIEEDVTPRVFRE
ELHFINPEIYEDIIADRSIAGLCGYPLCSNYFKDKFGNRTYIIVKNTVYDITVRKNFCCD
VCYEASEIVLRQIPTSPLYVRETSVEKKIQLPARAKLSGLHGKIVDITGLGTGYNKVPQK
SHKASFLVDNIARESLIQCTENSGLEEPTSQGKGCNTSKAGETSTVEANLREPRSETEDG
KNKLSENISNETQVKADIDVKSSDKTDVESLIQKIEDIGLEESTSQENGGKDTDPRNDSE
NKDRLGSINSEGGQVKSCGDVKSTEDGIKGNMTENPSHSLYELLMPVYQIEKAMKEWMSF
DSLRVILGDTYVRGMLEHFGHSWQDYDTTSGLKLGIDARAKYIALCRKLDQQELQEEKEM
LHLDVENDFSKAPTKAMPDYEQLKKDARKQELKVVSFLGGREQYEEADVEEEETGRKKGL
ESIPEEQCDTDKPPRVGNPSGIVAKKGKGKKTKKNVDELEVETSTLPLIDSYSQMAWRQQ
IVLEKTSKCLNEILGVTDLDGGKVGQLLKAVVITLDLEAHNISFRPGQWNLIMLIFMELL
SVRYPVISAAMKTEKYCELQKNIISAFGLDLGYMSRIVTYLTEIQPIISKNYRNTIEIKE
NIDIARTVSNQDAETNNHKNSSDTVIADGKQCRSEKLISKVNDLAVNLEKVNTQEKSCFL
PNKTEQSLRQEMDTSVKSTSIEELD
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatattagcaagaaaaccactggaatggagagcaaaaatgtgcagaagtct
tcaagaaggctagagtctttcatcgcaacaagtgagcttgctaaggcagctagaagccga
gcacaagcagccttttataggctgattgaagaggatgttactcctcgtgtctttcgagaa
gagcttcacttcataaatccagaaatatatgaagatattattgctgaccgaagcattgca
ggattgtgtgggtatcccttgtgttcaaattatttcaaagacaagtttggcaacagaacg
tacatcattgtcaagaatactgtctatgacattactgtcagaaagaacttttgttgtgac
gtctgttatgaggcatcagagatcgtcttgcggcagatcccaacctcaccactgtatgtt
cgagaaacaagtgtagaaaaaaaaattcagctcccagcaagagccaagttgtctggcttg
catgggaagattgtagatataacaggcttagggactggctataataaagttccccaaaaa
tcacataaggcaagttttcttgttgataacattgccagagagagcctgattcagtgcaca
gaaaatagtggattggaggaacccacttcacaagggaaaggctgcaatacatcaaaagca
ggagagacatctacagtagaggcaaatttaagagaaccaagaagtgaaactgaggatggt
aaaaataaactgtcagaaaacataagcaatgaaacacaagtgaaagcagatatagatgtc
aaatctagtgataaaactgatgtggagagcctgatccagaaaatagaagatattggatta
gaggaatctacttcccaagagaatggtgggaaggacacagatccaagaaatgactctgaa
aataaggatcggcttggaagcattaactcagaaggagggcaagtgaagtcatgtggggat
gtcaaatctactgaggacggtattaagggaaacatgacagaaaatccttcacactccttg
tatgaacttttgatgccagtgtaccaaatagagaaagcaatgaaagaatggatgtccttt
gactccttacgtgtcatccttggagatacatatgttcgagggatgttggagcattttgga
cactcgtggcaagattatgatacaacatcagggctcaaattaggcattgatgcaagggcg
aagtacatcgctctctgtcgcaagttggatcagcaggaattacaggaagagaaagagatg
cttcaccttgatgtagagaatgatttttcaaaggcccccacaaaagccatgcctgactat
gagcagctgaaaaaagatgcaaggaaacaagagctgaaggttgtttcattcctgggggga
agagaacagtatgaggaagcagatgtggaagaggaggaaacggggagaaaaaaaggcctt
gagtccattccggaagagcagtgtgacaccgataaacctcccagggttgggaatccaagt
ggaatagttgccaaaaaaggaaaggggaaaaagacaaaaaagaatgtggatgagcttgag
gtggagacttcaacgcttcccttgatagactcgtattcccagatggcatggcgacagcag
attgtgttggagaagaccagtaaatgtttgaatgagatcctaggagtaactgatcttgat
ggcggaaaggttggacaactactaaaggcggtggtgatcacactcgaccttgaagctcat
aatatatccttcaggccgggacagtggaatttaattatgctgatattcatggaactctta
agtgtccggtatcctgttatcagtgcagccatgaagactgaaaagtattgtgagcttcag
aaaaacatcatatcagcttttgggctagacttaggatacatgtcacgtattgtcacatat
ctcactgaaatccagcctataatcagtaagaattatagaaataccattgaaatcaaggaa
aatatagatatagcaagaacagtgtctaatcaagatgcagaaacaaacaatcataaaaat
tcatcagatacagtgattgcggatggaaaacagtgtagatcagaaaaactgatttctaag
gtaaatgatttagctgtaaatttagaaaaagtgaacacacaagaaaaaagttgtttcctg
cctaataaaacagagcagtcactcagacaagaaatggacacctccgtgaaaagtacttca
atcgaggaacttgactaa
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