Penaeus vannamei (Pacific white shrimp): 113817337
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Entry
113817337 CDS
T06111
Symbol
RnpS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03013
Nucleocytoplasmic transport
pvm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113817337 (RnpS1)
03015 mRNA surveillance pathway
113817337 (RnpS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113817337 (RnpS1)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113817337 (RnpS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_8
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
113817337
NCBI-ProteinID:
XP_027225167
LinkDB
All DBs
Position
21:complement(3618377..3625675)
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AA seq
299 aa
AA seq
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MVRSRSRSASSSGSEKERKAREKEKKPRRQSSSSDSSSSRSSSRSSSGSSGSSDSSSSSS
TSSRSSSSSSSSSTSRSRSRDKENKLKDKEKDKKDDPRSTVKAGAEKSRSRSRDKKTKPK
KPSKSRSRSGSPRGRRKPRSPTPRPTRIHVGRLTRNVTKEHLVEIFSVYGAVKSVDMSMR
VNNTLNRYGYIDFEKPEDAENAMKHMDGGQVDGQEITAAPVLIPRQIPPRRRSPPPMMQR
RGPPPRWRSPPRYIPGRMRRRSPPPMRRRSPPRRRSPRSRSRTPPRRRRYSRSSSSSSR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtagtcggagtcgatcggcttcctctagcggctcggagaaggagcggaaagcc
agagaaaaagaaaagaagccgaggagacagtcttccagcagtgacagcagctccagcaga
agttcttcaagaagctcgtcaggttcctcaggcagttctgacagttcctctagcagtagc
acttcatcaaggtcgtcgtcatcgtcatcatcatcttctacttcccgatcaagatctaga
gataaggaaaacaaattaaaggataaggagaaggacaaaaaagatgatccaaggtccaca
gtcaaagctggtgcagagaagagccgcagtcgcagccgagataagaaaaccaagccaaag
aaaccttcaaagtctcgttctcgatcaggctctccccgaggccgcagaaaaccacgctcc
cccacgcccaggccaaccaggatccatgtcggccgattgacgaggaacgtgaccaaggaa
cacttagtggagatcttctctgtttacggtgcagtgaaaagtgttgatatgtcaatgcgc
gtaaacaacacccttaaccgttatggctacatagactttgagaagccagaggatgcagag
aatgccatgaagcatatggatggagggcaggtggatggtcaagagatcacagcagcccca
gtgctcattccacggcagatccccccacgacgtcgctcacccccacccatgatgcaacgc
agagggccacccccgcgttggcgttctccccccagatatatcccagggagaatgcgtcgc
cgatccccacctcccatgaggcgtcgctcacctcctcgccgcagatcccctcgctcgcgg
tctcgcacgcctcccagacgcagaagatattcacgctcatcatcatcttcctctcgctga
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