Penaeus vannamei (Pacific white shrimp): 113817729
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Entry
113817729 CDS
T06111
Symbol
ctrip
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113817729 (ctrip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113817729 (ctrip)
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
113817729 (ctrip)
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
HECT type E3
113817729 (ctrip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
113817729
NCBI-ProteinID:
XP_069986540
LinkDB
All DBs
Position
15:complement(12494056..12566103)
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AA seq
2110 aa
AA seq
DB search
MAERGEGTAGGSHSRATTSGAHTAATRNRNQLVGSGVEGLEAIGSPLPLRKRKSGITEVV
HTKRRNSDSQHEATVGCNTVSPNSASSAGSTTKRRRVTSNSSNSEARDADSGDCGLESPA
SKRPRRGSHLESRNQSSASLAANAPSTPTRNQDTEKSPGGGGILKSYPLRNRLRLSDGGG
GGGGGGGGSGGNNPLSAGRLEQQQTQSQSLPSSPSSQGVAFLADTFRRLRESRRSSQEQS
STSNKRNTPQTKDARQSTGSWKRTHGAKKSPLSSKRSGRSKTNNTGSCASSSQHSSRGCG
KVSFGSSGSGMSGSHGGHEGSSSSSSGPPQASPHGACSTTGTQGATSATGAPPATTNASA
SLHAAPSTSTTSGLLPTASLATLGAIGGGSSSGASGGGLASSIGGLMGAPTDSESEESEM
GRLEALLASRGLSPSLFGALGPRMQHILHRSVSSSISSKAQQLLVGLQATGDESEQLQAV
IEMCQLLVMGNEDTLAGFPIKQVTPALINLLNMDHNFDMMNHACRALTYMMEALPRSSAV
VVDAVPVFLEKLQVIQCMDVAEQSLTALDMLSRKHSKAILQAHGVSACLMYIDFFSTGAQ
RAALSITANCCQNLTADEFHFIADSLQLLSSRLTSQGDKKCVESVCLAYSRLVDCFQNDP
NRLQEIAGHGLLSNIQQLLVMSPPVLSSGTFIMVMRMLSLMCNNCPELAVQLLKNNIAHT
LCYLLTNSTEPPGEQVELVSRSPQELYEITCLIGELMPMLPSDGIFAIDGALQRPSGCAQ
DTVMWQWQDDRATWQNYSTSDSRIIELAHQSGEDEISLCIQSRAYTIDFHSMQQINDNSG
TMRSVQRRMMPVGLAGTVIAATQATDARAKCLQEDSDLASNLIRSLFSLLYEVYSSSAGP
AVRYKCLRALLRMVQFSSPELLQQVLKSQSVSSHLATMLSSHDLKIIVGAIQMAEILMQK
LPEIFAIYFRREGVMHQIKRLCDPDATLGPPPAKWSSPELSLGPGRGGTPSSASPLLTGR
PFNGNCLDSTPSLPTPPSQDEDKLQSPSQLRLADVLKRKRATRIRTGNWRKSRQEESPAS
SSFSEFFMKNAGLGGGRESWRGMGSRTKLVAGTNSGSSSSGGGGGSSKSSFLANFNPSRW
GRCSSATSTPTHESPSGKDKLVGNSVSNSSSSSNKEVVRVWVREQAQRLNQEYFSTELQG
ATHPALSVLNRLIAAIQQLEQDPNCAVIALREISRIVTDSDISPFEVIHSGLVCCLLSYL
TASENSTMSLTQDGSLMAAIGGTGNSTENGSLTSVSISTPRDTRLRNFLHVFLGCPLDPL
SLGNVDTSHIALFSALVTKLNGCVNQLEQFPVKVHDLPGTALSGVGRGGSTSAIKFFNTH
QLKCNLQRHPDCTRLKQWRGGPVKVDPLALVQAIERYLVIRGYGRLRDEDDDNSDDDNSD
EDIDDTLAAVSVNQSSSSHKLQFVIGDHVLPYNMTVYQAIRQFSSPSDASASEADTDTET
PISHSAIWLQTHTIYYRPVQEEEQSRSSGGRKGKAGGSKPSPKKKADAHVGDGSIVGGNN
SVLDQYLTASLPASVTVSDPSLEVLALLRVLHALNRHYGALYPPATYPSPLPTAEFTNLK
LTAKANRQLQDPLVIMTGNVPPWLPQIAYACPFLFPFETRQLLFYAVSFDRDRALQRLMD
SSPELNSVDSSERVTPRLERRKRTVSRDDILKQAEAVISELASSRAMLEIQYENEVGTGL
GPTLEFYALVSKELQKADLELWRGETVTVEERTEENRGKAVKYVNASQGLYPMPVPRNMK
SAQMTKLRAKFRFLGKFMAKAVMDSRMLDLGLHECVYKWLLAEEWSLGLGDVVSLDPTLG
QTLTRLHATVLQKKRIEAQAEQEGISGAELQARLETLTVDGCSVEDLALTFTLPGYPNIE
FRKGGSDIAVTVHNLDQYLQLVIEWLVREGVRRQMEALREGFECVFPLTQLRVFYPEELE
QLFCGSSDASKWDMKQLAECCRPDHGYTHNSRAVKFLLQIIADYTPAQQRSFLQFVTGSP
RLPVGGFRSLSPALTIVRKTFEAGENPDDFLPSVMTCVNYLKLPDYSSIDIMSAKLEIAA
REGQHSFHLS
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggtgaggggaccgcaggggggtcacactcacgagccaccaccagtggg
gcccacactgcggcaaccaggaacagaaatcagctggttgggtcaggagtggaggggttg
gaggctatcgggagtcccctgcccctacggaagcgtaagagtggcatcactgaagttgta
cacactaagagaagaaatagtgacagccaacacgaggcaacagtgggttgtaatactgtc
agtcccaactcggctagctctgctggcagcacaaccaagagaagaagagttaccagcaat
agtagcaacagtgaagcacgagacgcagatagtggcgattgtggcttggagagcccggca
agcaaacgtccgcgccggggcagtcacctagagagccggaaccagtcatctgccagcctg
gccgccaacgcacccagcacacccactcgcaaccaggacacagaaaagtcgcctggtggt
ggtgggatactaaaatcatatcctctgcggaaccggttgcggctaagtgacggaggtgga
ggaggaggaggtggtggtggtggaagtggcggcaacaatccactcagcgctggccggctg
gagcaacaacaaactcagtcacagtctctaccatcatcaccctcatcccaaggagttgct
ttccttgcggatacgttcagaagactgagggaatcacggagatcatcacaggaacaatca
tcaacatcaaacaaacgaaacacgccacagaccaaagacgctagacagtctacaggatct
tggaaaagaactcacggagccaaaaagtcacctttatcatctaaacgtagtggtcgaagt
aaaaccaacaacacggggtcgtgtgctagtagcagccagcactcatcaagggggtgcggt
aaggtgagctttggtagcagtggctccggcatgtctggatcgcatggtggccatgaggga
tcgtcatcatcgtcatctgggccaccccaggcctccccccacggtgcttgctctacaaca
ggtactcagggagccactagtgccactggagcaccgcctgccaccaccaatgcatccgct
tcgctccatgcagcaccctctacatccaccacctctggtctcctgccaacagcatcgttg
gccacgctgggagccattggtggaggtagtagcagtggagccagtggtgggggcctagcc
agcagtataggaggactcatgggtgcacccacagacagtgagagtgaggaaagtgagatg
ggacggctagaggctcttctagcatcacgtggactctctcccagcctctttggagctttg
ggtcctaggatgcaacacattctccaccgttcagtctcatcttccataagctccaaagca
cagcagttgcttgttggtcttcaggcaactggggatgaaagtgaacagcttcaagcagtg
atagaaatgtgtcagttgttagtgatgggcaatgaggatacattggctggattcccaata
aaacaggtgacaccagcactcatcaatttgctcaatatggatcacaactttgacatgatg
aatcatgcttgtagagcattgacttacatgatggaagctctgcctagatcatctgctgtt
gttgtggatgctgttcctgtgttcctggagaagctgcaagtcatacagtgtatggatgtt
gcagagcaatcattaactgcccttgacatgctgtctcgcaaacattcaaaagcaatattg
caggcacatggggtatcagcatgcctcatgtacatagacttcttctcaacgggtgcccag
cgagcagcactaagcatcacggccaattgttgccagaacctaacggctgatgaattccat
tttattgctgattctctccagttactctcttccagactcacatcacagggtgacaaaaag
tgtgtggagagtgtctgtctggcttacagtcgactggtagattgcttccagaatgaccca
aatagattacaggaaattgctggtcatggccttctttccaatattcagcaattactggtg
atgtcgccaccagttttaagcagtgggacattcatcatggtgatgcgcatgctatctctt
atgtgcaataactgtcctgaacttgcggtgcaactactgaagaacaacatagcacataca
ttatgctaccttttaacaaactcaactgaacctcctggagagcaagttgagttggtgtcc
agaagcccacaggagctgtacgagattacttgcttgattggagagctgatgccaatgctt
ccctctgatggtatctttgcaattgatggagctttacaacgtccatcaggatgcgctcaa
gacacagtaatgtggcagtggcaggatgatagggcaacatggcagaactattccactagt
gattctagaattattgagcttgcacaccagtctggagaagatgagatcagtctttgcata
caaagccgagcttacacaatagactttcattcaatgcagcagattaatgacaactctggc
acgatgagatctgttcagcggcgcatgatgccggttgggttagctgggactgttatagca
gcaactcaggccacggatgcaagagcaaagtgcctgcaggaagattcggatttagcatcc
aatctcattcgttcattgtttagtttattgtatgaagtctacagttcctcagcaggtcca
gcagtgcgctacaaatgtctgcgggcattgctcaggatggtgcagttttcaagccctgag
cttttgcaacaagttttaaaaagtcagagtgtatcatcccacctagccactatgttgtca
tcgcacgacttaaagattattgttggagctattcagatggctgagatccttatgcagaag
ttacctgaaatttttgcaatttactttagaagagaaggtgtaatgcaccagattaagcga
ctctgtgacccagatgcgactttaggtcctcctcctgcaaaatggagcagtcctgaactc
tccctagggcctggccgtggagggacacccagctcagccagtccacttctgactggacga
ccattcaacggtaattgtttagactcgaccccatctcttccaaccccaccaagtcaggat
gaagataaattgcagagcccatcccagctgcgtctagctgatgtgctcaagcggaaacga
gcaactcgtattcgaactggaaactggagaaagagcaggcaagaggaatcacctgcatca
tcatcatttagtgaattcttcatgaaaaatgctggcttaggtggaggacgagagagctgg
agaggcatggggagtcggaccaaactagtggcaggcaccaacagtggcagtagtagtagt
ggaggtggtgggggaagcagtaaatcctctttccttgccaatttcaatccatcacgttgg
gggaggtgcagttctgccacatcaacaccaacccatgaatctccttcaggaaaggacaaa
ctagttggtaatagtgtgagcaacagtagcagtagcagtaacaaggaagtggttcgtgtc
tgggtgagggaacaagcacagcgtctcaaccaagagtacttctccacagagcttcaggga
gccacacaccctgcacttagtgtcctaaatagacttatagcagccatacaacaattggaa
caagatccaaactgtgctgttatagcactgagggaaatcagcagaattgtgactgatagt
gatatcagtccctttgaggtgatacattctgggctggtgtgctgcctcttgtcctacctc
acagcatctgaaaattctactatgtccctaacgcaagatggaagtttaatggcagccatt
ggaggcacaggcaacagcacagagaatgggagccttacgtctgtcagtataagcacaccg
cgggacacccgactcaggaatttccttcacgtcttccttggttgcccattggacccatta
agcctgggcaatgtggacaccagtcatattgcattgttcagtgcccttgtgacaaagctc
aatgggtgtgtcaaccagttggaacagtttcctgtgaaggtccatgatctcccaggaact
gctctttcaggggttgggagaggaggctcaacctctgccatcaaatttttcaacacgcac
caactgaagtgtaaccttcaacgccatccagactgcacgagactgaagcagtggcgaggt
gggccagtaaaggttgaccctctggctcttgtacaggctattgaacgttatttagttatc
agaggttatggtcgactcagggatgaagacgatgacaactccgatgatgacaattctgat
gaggacatagatgatacactggctgcagtatctgtcaaccagagctcttcaagtcataaa
ctccagtttgtcattggtgatcacgtcttgccgtacaatatgaccgtttaccaagctatt
agacagttctcctcaccatctgatgctagtgcctcagaagcagacactgatacagaaacc
cccatctcacattcagccatttggcttcaaacccatacaatttattatagacctgtacaa
gaggaggagcaaagtcgaagttcaggaggaaggaagggcaaggctggagggtcaaaaccc
agcccaaagaaaaaagcagatgcccatgttggagatggtagtattgtgggaggaaacaat
agtgttctggaccagtacctgactgctagcctaccagccagtgtgactgtaagtgacccg
agcttagaagtgctggcattgttgcgagttctccacgctctcaaccgccattatggtgcc
ctctaccccccagccacttacccgtccccactaccaactgctgagttcacaaacctgaaa
ctgacagccaaagcaaatcggcagttgcaggatcctctggtgataatgactggcaatgta
ccaccgtggttgcctcagattgcttatgcatgtcctttcctgtttccctttgagactcga
caattactgttttatgcagtgtcctttgatcgggaccgagctttacaacgacttatggac
tcttctcctgagctcaactctgtggatagtagtgaaagagtaaccccaagacttgaaaga
cgtaagagaactgtctctcgtgatgatattctcaagcaggcagaggctgtgattagtgaa
ctggcttcttcaagggccatgctagaaattcagtatgaaaatgaagttggtacaggccta
ggacctactttagaattttacgctcttgtatccaaagaactccagaaagctgatctagag
ctttggcggggtgaaacagtgacagtggaagaaagaactgaagaaaatagaggaaaggca
gtgaaatacgtgaatgccagtcaaggcttgtatccaatgcctgtaccgagaaacatgaaa
tctgcccaaatgactaagttaagagcaaagttcagatttcttggaaagttcatggctaaa
gctgttatggattccagaatgctggatcttggtcttcatgaatgtgtgtacaagtggctc
cttgctgaagaatggtctctgggtcttggtgatgttgtttccttagatccaacgttgggc
cagaccctcacacgccttcatgctacagttttacaaaagaaacgtatagaagctcaggct
gaacaggaaggaatctcaggggctgagttacaagctcgtctcgaaaccctgactgtagat
ggatgtagtgtggaagaccttgcgctgaccttcacattacctggctatcctaacattgag
ttccgaaagggtggctcagacattgctgtcactgtacataaccttgatcagtacctacag
cttgttattgagtggttggtccgagaaggagtcagaaggcagatggaggctctacgtgaa
gggtttgagtgtgtctttcccctgactcagctccgagtcttctatcctgaagagcttgag
caactgttctgtggctcctcggatgcctcgaagtgggacatgaagcaacttgctgaatgt
tgccgtccagatcatggatatacgcacaactctagggcggttaagttcttgctgcagatt
attgcagactacacaccagctcagcagagatccttcttacagtttgttacaggttcacca
aggctgcctgttggaggtttcagaagtctatctccagcacttaccattgtaaggaaaact
tttgaagcaggagaaaaccctgacgatttcttaccttcggtgatgacctgcgttaactac
ctgaaactaccagactactccagtattgatattatgagtgccaaattggagatagcggcc
agagagggccagcacagcttccacctctcatag
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