Penaeus vannamei (Pacific white shrimp): 113818231
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Entry
113818231 CDS
T06111
Symbol
mre11
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03440
Homologous recombination
pvm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113818231 (mre11)
03450 Non-homologous end-joining
113818231 (mre11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvm03032
]
113818231 (mre11)
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113818231 (mre11)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
113818231 (mre11)
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
113818231 (mre11)
BRCA1-C complex
113818231 (mre11)
NHEJ (non-homologous end-joining)
MRX complex
113818231 (mre11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
113818231
NCBI-ProteinID:
XP_027226210
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All DBs
Position
33:4650674..4659821
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AA seq
648 aa
AA seq
DB search
MGSTLDDTFRILIATDNHLGYAEKDPERGNDSFETFEEILKMAVEQQVDFILLGGDLFHE
NKPSRQCLVKCMELLRKYTFGDKPVCFEYISDPTENFKNSKNPMVNFHDPNLNVSIPVFS
IHGNHDDPSGLGQFCALDMLSTAGLVNYFGRTGDLKNITISPVLLEKGTNKLALFGLSSI
KDERLFRLFKENKVKMMRPKEFHDEWFNIMVVHQNHAKHGMSNYLPEAFLDPFLHLVIWG
HEHECLIQPRLSADNSFHVVQPGSSVVTSFCAGEAVEKHVALLEVNNKQLFNVTPLKLET
VRPFVFDDVCLADQDLDYVIGNKERNPVEEFVEEHIRGMILQAKEQLTGHPKQPKKPLIR
LRVVYTDESQMFNTARFSHKFTEDVANPNEMILFKRERKEKKKNETGIDKEAMDAVFAGE
DVAETRVEDLVEQYFSELQDYTQKLFLLSERGLAKGVNTFVEKDDRDAISTVFQHQVKKT
VDHILSGDGDIDEENILDAIIIYREERLTKNNPQLEEQEAQAALSSTTRERRRVSDDDDA
MMDDIDMDDLSPPPARGRGSRGGRGRGSRGSRARAASLSASTTQTSSKNQLSMIGDGSPK
VSQSSTRARASRGRGRAATRNQSIMESFSRARTAASSRKGIVYDSDDD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaacgttggatgacaccttccgtatcctaatagctactgataatcatcttggc
tatgcagaaaaggatcctgaaagaggaaatgacagctttgaaacttttgaggaaattctg
aaaatggcagtagaacaacaagtggactttatcctgcttggtggtgatttgtttcatgag
aataaaccctccaggcagtgtcttgtgaaatgcatggagcttctccgcaagtataccttt
ggagacaagcctgtttgctttgagtacataagtgatccaactgagaacttcaagaattcc
aagaacccaatggtcaactttcatgacccaaatctcaatgtttcaattcctgtgttttca
attcatggcaaccatgatgatccttcaggacttggtcagttttgtgctctagacatgctt
tcaacagctggcttagtcaactattttggacgcactggagacctcaagaacatcaccatc
agtcctgtattgctggaaaaaggaacaaacaaattggcactatttggtttgtcatccatc
aaagatgagagactctttagactgttcaaagaaaataaggtcaagatgatgcgaccaaag
gaattccacgacgaatggttcaacatcatggtggtccaccagaaccacgcaaaacatggc
atgtccaattacctcccagaagctttcttggaccctttccttcatcttgtcatctggggt
catgagcatgaatgtcttattcaaccacgactcagtgctgataattcgttccatgttgta
caaccaggaagttcagttgtaacttcattttgtgctggtgaggctgttgaaaagcatgtt
gctctgcttgaggtgaataataagcagttgtttaatgtaacccctctcaagcttgagact
gtccggccatttgtatttgatgatgtgtgcttggctgatcaagatctggattatgtaatt
gggaataaagaaagaaacccagtagaggagtttgttgaagaacacatccgtggtatgatt
ttgcaggccaaggaacaactcacaggtcatccaaaacaacccaaaaagccacttatccgt
cttcgagttgtatatacagatgagtctcagatgttcaacacagccagatttagccacaag
tttacagaagatgttgcaaatcccaatgaaatgatcttattcaaaagagaacgtaaagaa
aaaaagaaaaatgagactggtattgataaggaggccatggacgcagtttttgctggtgaa
gatgttgcagagacaagagtggaggatcttgtggagcaatatttttcagagctgcaggat
tacacacagaagctattcttactctcggagcgaggtttagcaaagggggtaaacaccttt
gtcgagaaagatgacagagatgccatcagcactgtttttcagcatcaagttaagaagact
gtggaccacattttatccggagatggagatattgatgaggaaaatattttggatgcaatt
atcatctatcgagaagaaagacttacaaagaataatccgcagttggaggaacaagaggca
caagcagccttaagtagtacaacaagagagagaagaagagttagtgatgatgatgatgcg
atgatggatgacattgatatggatgacctcagccctccgccagctagaggaagaggatcg
cgaggaggtcgtggacgaggcagtagagggtcccgtgctagggcagcaagcttgtcagct
agcaccactcagacatcaagcaaaaatcagttgtcgatgattggtgatggttctcctaag
gtatcacaatcttcaaccagggcacgagcatcacgaggaagaggaagggcagcgacaaga
aatcagagtatcatggaatcattttctcgggccagaactgctgcttcaagtcgtaaagga
attgtctatgacagtgatgatgattag
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