Penaeus vannamei (Pacific white shrimp): 113818335
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Entry
113818335 CDS
T06111
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24-like isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvm01002
]
113818335
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113818335
Enzymes [BR:
pvm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
113818335
Peptidases and inhibitors [BR:
pvm01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
113818335
Ubiquitin system [BR:
pvm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
113818335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
DUF3517
UCH_UBL1
UBA_7
UBA
TetR_HI_0893_C
Motif
Other DBs
NCBI-GeneID:
113818335
NCBI-ProteinID:
XP_027226334
LinkDB
All DBs
Position
23:36268230..36297793
Genome browser
AA seq
2613 aa
AA seq
DB search
MEQEDENISLLLNMGFPDVRAIKRALKLSNGEVNEAVIYLTEQPLTSYSTVDDLRDVEMA
ETQGPPTYDEAGGDNGNSMEFPTTNLYELEGRVFTDTWSIPYKREESLGKCLVAATRLAE
EGLCDADESCQRFMERCLPECFQKLLANGAVRRWGPEIQEGVFNLLDLLTNLVIARLKQG
PIPEALLKNSYALAMDSECEWNQKNKHRPAEFIGDTTYAESPSQFELYGWLVDLINIYGN
RGGLELVAGRFASGEELTAGQMAALLLPLGQCAKFLMRDIVCPILQPAVTQALNYVANLE
EKQLKGQKIGSCYELLEAVRLLCVSLWPEEVQRTSDLRLEMIIRMLKTPHFSARMNALKE
LARLIEDSERRRGNVIDADIIQEWMTRNRVLSLALEGNIDQVQYTDRMKELVEFMGPKLQ
EEELTRIWHMAEKASPHVVDNIHRIMAAAATRFNPHQFDHLLSLIRKSWDEGNDRLREKL
LSFIGKIGQDSRLGRTAEKMLDALWELARVPALPPRLVHQAMNEHLAILNESATREQLRK
SYIVRCVEDIKRSPAVYLPLKQLHYLARSITKGGASYFKTEKATLSDLNRSHEIVKLITS
SLSKCHALAVSASGNQQPCPSTMIDGKYTHDDYMRVHLEFLQFLLKEGDIYLAWARCKDI
WETLVGNTNASGHDKETCFTWFSDCLGDLENNTQRDLFCEKLLRLDPVTMTRPAFTCFVD
YFHAVNLNDHKLIRNGNVITVDKLEPLGMEFIWQLVLECQDELLAEDAMKLLLDMSYMSL
SARLKRDPPQLHAKFISECYRKLEKSMLRVNETAVGAAVSTATKTLTAMAVSDIGTLPAC
SRTSCIQHIRRVLVLAERYISSIEEQHPGPRSLPPHGASFTGVPIILNITCDSNKLDVKL
ECHSNERIGLIRGKIANLARVSLDQVHTLMFGEGGSGALISAADQDNRLLHHIGVHTNTP
VVAKINTTGAAQLKEVGDNWDELPSAASYCDTVESGISDVGAAGSSGAMASVAGPSRMEA
AGGASAAVGDCQGSQYNLEQEKQLPGVVMSSQGKDFFSMLYQLALLDEQRIVEAVRRVLY
LVPTDPSVADKFDHICSGGSITSDVSPRTTPYGSPAKRDKVRDKEKERETGREILRTLLD
LEATDMTPFRLLYNMEVLSGKIMPVSQEGTMHGSAHFCEEFLMCGGLSLITALLQRDSLP
QDVDYEIRQSVYLITLQILRYLLCGSATVGQELPITSQQPHPGPPKRSALDPSTQTSPPP
LAYSSLTPIIANKVIVGMSLDEWCEMVSSLMRVAWAGAAGKLYLSLATLTLRDPALSPPE
TNKSSRQSSTGSSHSSSSDSEGVLQGGVCVQQTTIPPVDSLIASQSLHLLIAFLRFRPQH
IERWYGMANVKDFLVDVLVGCSSQEVREVAYLQFTNLINIATPTEMHPKQFLTQVVLKAP
LPLWVPSTSARGATLRLLSQCTQYFSLRSKLLSGLNKSDQEMLGISANQMLEDEAGWLTN
FNATREAARERPESGIAALRHADNILLAGHLTLITALLSCEGINKEDFGAMLIPLLITEY
LFPASKLVLESGPGQDSLSASRNYSAKCTGKESRLAAYHLLVHLVTNSEQNLTRLAGQLV
SLHHTLNPDSIKEFEYAPAVEGRCASGYVGLKNGGATCYMNSVLQQLFLVQGVPEDILAV
CDDDQDEDSLFYQLQTVFGHMMESQLQYYIPDKFWKCFRMDGQPVNVREQQDAFEFYTRL
TEQIDDYLKAQRHERVFAHRFEGVYSIQRICQDCPHRYEREEPFLALNLTVTKCHDLQDS
LDQFVKGELLEGDNAYYCEKCNQKRTALIRTCVKSLPPVLVIQLKRFGYDWEASRALKFD
DYFKFPWVLDMGAYTAEGIAEREEDPNGGDEPEIRSTPSPKPKESLPKSLSSSPRVPHTP
TKSSPSGVTSPHTPRLNTRVRHRGAMYELVGVIVHSGQASAGHYYSYIKDRRGDPLTNPN
KGRWFKFNDTTVEPVEMTDTLLEQECFGGTYKAKVSYDSSNPLPEDRLRYWNGYMLVYDS
LDDRMTTPKTPKTPRVGVSSRSFRASTSSAKKSLSMSGSNERRARSSLCELSQLLQQGEK
QGMFREHMPPRILSSITHDNLTFLKNRDVYSSDYYNFIHHLCSVNQEKSQNGVSSILCVQ
AVHLGLNFLLNTYLRTKDKEEGVISQWVQLIHSLCVQSKEACSWVINFFTAEHGSVHILP
LLLECPNKMIRSQFGNLLDSIFKAEYEHAGKVNSIEPIIKHLISSLASDVPSLVKTSQQY
FLLLQNYCQQGLTHCSQILSLGGFSALLNFLLGPSDSDKRRWSSVQAQDFGPLHSIISTI
ILCFDMTPHQTSGTATPSEKSDEDQQEKLVMPGEVVQVLYGGEQARWLREAVVAYREVSG
SVPLLSKALRAAATENFSFSKALIAAVMYEYAKAPSNMLKDLSQLLQEILQISDSLQSSR
TTAVLEGFATADTENIMGLLDMIGNNKDHDSRRAYQCIKLVVTLSAKCPLARDHLTSTQT
RWQWAVEWLRGRMDDHSATLSAATGLSNEDSNTKNFQRTTSAQLTLEEATALLSELESTE
MEIDCDPVELGEIKESASERETSPSEDLDAIDP
NT seq
7842 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaggacgagaatatctccctcctgctgaacatggggttccctgacgtgcga
gccatcaaaagggccctaaagctgagcaacggggaggtgaacgaggccgtgatctacctg
acggagcagcccctcacctcgtactccaccgtggacgacctcagggatgtggagatggcc
gagacccaggggccgcccacgtatgatgaggctggcggtgacaatgggaacagcatggaa
tttccaacaaccaacttgtatgagcttgagggccgtgtttttaccgacacctggtcaatc
ccttacaaacgagaagagtcattaggaaagtgtttggttgcagcaacacgtctagctgaa
gaaggtctttgtgatgctgatgaatcatgtcagcgctttatggagcgatgtcttcccgag
tgctttcaaaaactactcgcaaatggtgccgtgcgtagatgggggcctgagatacaggaa
ggggtgtttaatttgctagacttattgacaaatctcgtcattgcaagacttaaacaaggg
cccattcctgaagctttactaaaaaattcttatgctctcgcaatggattctgaatgtgaa
tggaaccagaagaacaagcacagaccagcagaattcattggagacactacatatgctgaa
tcgccatcacaatttgaattatatggttggctggtggacctcattaatatatatggcaac
cgtggtggcctggagctggtggctggacgatttgcttctggagaagagttgacagcaggc
cagatggcagctttgcttcttcctcttggacagtgtgctaagttcttaatgcgggatata
gtatgtcccattttgcagcctgctgtcacacaggcactgaattacgtggcaaatctagag
gaaaagcaactaaagggtcagaaaattggatcatgttatgagcttcttgaggctgttcgg
ctcttatgtgtatccctttggccagaagaggtgcagcggacgagtgaccttaggctcgaa
atgatcattcgtatgttaaagacgcctcacttttctgcaagaatgaatgcgcttaaggaa
ctggcaagactcattgaagatagtgagagacggcgaggcaatgtcattgatgctgacatt
attcaagagtggatgaccaggaatagggttctgtctctggctcttgaaggtaacatcgac
caagtgcagtacactgatcggatgaaggaactagttgagtttatgggaccaaagctgcag
gaagaggaactgacacgtatttggcacatggcagaaaaagccagtccccatgtagtagac
aacattcaccgcattatggctgctgctgctacgcgctttaatccgcaccagtttgatcat
cttcttagtcttatcagaaagagctgggatgaaggtaatgatcggctgagagagaaactg
ctctcctttattggaaagattggccaggactctcgattaggtcgaacagctgagaagatg
ctggatgctctttgggagcttgcacgagttccagccttgcctccaagattagtgcatcaa
gcgatgaatgaacaccttgccattctcaatgagtcagccactagggaacagttgaggaag
tcatacatagtgcgatgtgtggaagatattaaaagaagtcctgctgtttatcttcctctg
aagcagctacattaccttgcacgttccattacaaaaggaggggcttcgtacttcaaaaca
gagaaggccaccttgtcagatctgaatcgcagccatgaaattgtgaaactcatcacctcg
agccttagcaagtgccacgccctagcagtgtctgcaagtgggaaccagcagccctgtcca
tccacaatgattgatgggaaatatacacatgatgattatatgagagtgcacttggaattt
ctccagttcttgcttaaagaaggtgatatttatctggcttgggcaaggtgcaaggacatt
tgggaaactcttgttgggaatacaaatgcatccggtcatgataaggagacttgcttcact
tggttcagtgattgcctgggtgatcttgagaataacacccagcgtgacctattctgtgaa
aaactccttcgtcttgatcctgtaaccatgactcggcctgcgttcacctgttttgttgat
tacttccatgctgtgaatctcaatgatcacaaactgataaggaatggaaatgtgattact
gtggataagttagaacccttgggaatggaattcatatggcagctggttctagagtgccag
gacgagctacttgcagaagatgcaatgaagcttttgcttgacatgtcatacatgtcatta
tcagctcgactcaagcgtgacccaccacagttgcatgcaaaattcatatccgagtgctac
aggaagttagagaaatctatgctacgtgtcaatgagacagctgttggtgctgcagtgtcc
acagcaactaaaactctcactgcaatggcagtgtcagacattggaactctgccagcttgt
tcaagaaccagctgcattcaacacattcggcgtgtactggtgcttgctgaacgctacatc
agctccatagaagaacagcaccctggccctcgctcgttaccccctcacggtgcctctttt
actggtgtacccatcattctcaacataacttgtgattctaataagttggatgtgaaacta
gagtgtcacagcaacgaacggattggcttgatacgagggaagattgccaaccttgcacgg
gtttcactagatcaggttcacacgctaatgtttggtgaaggtgggagtggagcgctaata
tctgcagctgatcaagacaacagattactgcatcacataggtgttcacacaaatactcct
gttgttgccaagataaatacaactggtgctgctcaactaaaagaagttggggataactgg
gatgagctgccaagtgctgcaagttattgtgatacggttgaaagtggtatctcagatgtg
ggtgcagcaggaagctcaggagccatggcaagtgtagcgggtccttcccggatggaggca
gcaggtggagcctctgcagctgttggggactgtcagggaagccaatacaacctggagcaa
gagaagcagttgcctggagttgtcatgtccagtcagggaaaggatttcttctctatgctg
tatcagctggcacttctcgatgagcaaaggattgttgaggcagttcgtcgtgtcctgtat
cttgtcccaactgatccaagtgttgcagataaatttgatcatatttgtagtggaggaagt
atcacctctgatgtcagtccaagaaccacaccatatggatcacctgctaaaagagacaaa
gtcagggataaagaaaaggagagagaaactggaagagaaattctgcgcactttgttggat
cttgaagcaactgatatgacacctttcaggcttttgtataatatggaggttctgtcaggg
aaaattatgccagtgtctcaagaaggtacaatgcatggcagtgctcatttttgtgaagaa
tttcttatgtgtggtgggttgagcctcattacagcgctgcttcagagggattctcttcct
caagacgttgactatgaaattcgccaaagtgtctacctcataactttacagatattaagg
tatttactctgtggttctgcaacagtagggcaggaattgcccatcacaagccagcaacct
cacccgggaccaccaaaacgttctgccctggacccatcaacccaaaccagtcctccccct
ctggcgtactcatcccttactcctatcattgccaacaaagtcatagtgggaatgagcttg
gatgaatggtgtgaaatggtctccagtctcatgagagtggcttgggcaggagctgcaggc
aagctctacctgtccttggcaacacttacgctgagggaccctgctctctcaccccctgag
actaacaagtcatcaagacaaagcagcactggaagcagtcacagctcaagtagtgatagt
gagggtgtgctacaaggaggtgtgtgtgtacagcagacaaccattccacccgtagattct
ctcattgcctctcagtcgttacaccttcttatagccttcttaagattccgtcctcagcac
atagaacggtggtatgggatggcgaatgtgaaggacttccttgttgatgtgctggttgga
tgtagttcacaggaggtacgagaggttgcatacctacaatttaccaaccttatcaacatt
gctacaccaacagagatgcatccgaaacagtttcttactcaggtggtactaaaggcccct
ttgcctttgtgggttccgtccaccagcgcacgtggtgctacgcttcgactgctatctcag
tgcacacagtacttcagtctcaggtcaaagttactgtctggacttaacaaaagtgaccaa
gaaatgttaggcatcagcgccaaccagatgctggaggacgaggcagggtggctcaccaac
ttcaatgccacaagagaagcggcgagagagcgtcctgaatcaggaatagcggcattaagg
catgccgataatattctcctggctggacatctgacgctcatcactgcactgctatcctgc
gaggggattaacaaggaagacttcggtgctatgctgattcctttactgataacggagtac
ctgtttcccgcatcgaagttggtactggagagtggaccaggtcaagactccctaagtgct
agcagaaattactcggcgaagtgcacaggcaaggaatcccgtttggctgcttaccacctc
ttggtgcacctggtgaccaactcggagcagaatttgaccagacttgcagggcagctcgta
tctctccaccacactttgaacccggactccataaaagaatttgagtatgctccggctgtc
gagggacgctgtgccagtggatatgtggggctaaagaatggtggtgccacttgttacatg
aactcggtcttgcagcaacttttcttagtacaaggtgtacctgaagacattcttgccgtc
tgtgatgatgaccaggatgaagatagtctgttttatcagctgcagacagtattcggccac
atgatggaatcacagctgcaatattacatacctgacaaattctggaaatgtttccgaatg
gatggacaacctgtcaatgtcagggaacagcaagatgcttttgaattctatacaagatta
actgaacagatagatgactatctcaaagcgcagagacatgagcgggtatttgctcataga
ttcgaaggagtttattccattcaaagaatttgccaagattgtccacatagatatgaacga
gaagagccattcttagccttaaatctcactgtcaccaagtgccatgatcttcaggattct
cttgatcagtttgtcaaaggcgagctcctcgaaggagacaatgcttactactgtgaaaag
tgcaatcagaagagaacagctttgatacgcacatgtgttaagagcctccctcctgtcctt
gttatccagctgaagagatttggttatgactgggaagcttcaagagctctcaagtttgat
gattatttcaagtttccatgggtactagatatgggagcatatactgcggagggcattgcc
gaacgtgaggaagatcccaatggaggtgacgagcctgaaatcaggagcaccccatcacca
aagcccaaagagtctctcccaaaatcgctctcttcttctcctagagttccacacacgcca
accaagtccagtccttcaggtgttacgtcacctcacacacctaggcttaatacaagagta
agacataggggggcaatgtatgagttagtaggtgtcattgtgcacagtggacaagcaagt
gcagggcactattactcatacataaaggatcgtcggggagatccactgaccaatccaaac
aagggcagatggttcaagttcaatgatacaactgttgaaccagtagaaatgacagatact
ctcctggagcaggagtgtttcggtggaacatacaaagccaaagtgtcatatgactcgtca
aacccacttcctgaggacaggcttcgatactggaatggctatatgctggtatatgatagc
ttggatgacagaatgaccactccaaagacgccaaagactccgagggtgggagtctcctcc
agatcttttagagcatcaactagcagtgcaaagaagagtttatctatgagtggtagcaat
gagagaagagcacgttcaagtttgtgtgaactaagtcaactattgcagcaaggagagaag
cagggcatgttccgtgaacatatgccgccccgcatcttatcatctatcacccatgataac
ctcactttcttgaagaatagggatgtttactcttcagactattataacttcatacatcat
ttatgctcagttaatcaggaaaagagtcagaatggtgtatccagcatcttgtgtgtacaa
gcagttcaccttggcctaaacttcctgctgaacacatacctgcgtacaaaagacaaagaa
gagggagtgatcagccagtgggtccagctcattcattcattgtgcgtgcagtctaaagaa
gcttgcagttgggtcatcaacttctttactgctgaacatggatcagtccatatattacca
ctgctactggagtgtcctaataaaatgatacgaagccaatttgggaacctcctggactct
atcttcaaggcagagtatgagcatgctggtaaagttaacagcattgagccaataataaag
catcttatatcatcattagcatctgatgtcccttccctggtcaagacctctcaacagtac
ttcttgcttttacaaaattattgtcagcagggactcactcactgttctcaaatcttaagt
ttgggtgggttctccgccctcctcaacttccttctcggcccatctgattcggacaaaaga
cgttggtcgtctgtacaagctcaggattttggaccactgcactctatcatttccactatt
attttgtgttttgatatgacgccacaccagacctcaggtacagccactcccagtgaaaag
agtgatgaagaccagcaagagaaactggttatgccaggcgaagttgtccaagtcttgtac
ggaggcgagcaagcacgttggctccgggaagcagttgtggcttacagggaagtgtctggc
agtgtccccttgttgtccaaagcgcttagggcagctgcaacagagaatttctcattttca
aaagcactcattgcagctgtaatgtatgaatatgcaaaggcaccctctaatatgttgaaa
gacctttctcagcttctgcaggagatactgcaaattagtgattccctgcaatctagtcgc
acaactgcagttctagaaggttttgcgactgcagatacagaaaacattatgggtctcttg
gacatgattggcaacaacaaagaccacgacagcaggagggcttaccagtgcatcaagctc
gtcgtgacactctcagccaaatgtcctttagctcgagaccacttgactagtacacagacc
cgttggcagtgggcagtcgaatggttgcggggaaggatggacgatcactcggccactttg
tctgctgccactggtcttagcaatgaagactcaaacacgaaaaatttccaacgaaccaca
agtgctcagctaaccttagaagaagccacagcactcctgagtgagctagaatctactgaa
atggagattgactgtgaccctgttgaacttggtgaaataaaggagagtgcatcggagcgt
gagacttcaccgtctgaagacttggacgccattgatccatag
DBGET
integrated database retrieval system
