Penaeus vannamei (Pacific white shrimp): 113818498
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Entry
113818498 CDS
T06111
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113818498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvm03009
]
113818498
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113818498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
SET_assoc
RRM_occluded
Rad60-SLD
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
113818498
NCBI-ProteinID:
XP_027226496
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All DBs
Position
27:complement(32741532..32749183)
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AA seq
804 aa
AA seq
DB search
MAMEGPRSEPTSVIVTQLPKEAYRRPINDYFGQIGPVVRSHLVRDNEGNSKGIAYIVYST
QEDAERCVEQLNNSKFQDKVIHVKLTKQKGGRKKYEEVDEDPEVKEESNDFYEEEPENKY
DNKWNPAKDRNMRKQGRIVVRNLSFKVDEDIVREHFSKFGVIDEINLLRKKDGQLVGCGF
IQFRSRSEALRAIEECNMKPLLGRTIAVDIAVPKEKFTGKNERTESSHRDYGDDPGNSAA
GPNERFYYKDEQKGNSHVIFGEEDTDYLNVKIKEERMSDDEEMTIVKERRSDNKSDSKED
IKVKREDMLDEEGDDSGVADDETASEDEEEFKGSQVVDPMEKSKPAPTKGPSKDVAEERT
LFIRNVSFDATEEDVGKVLEKFGELKYVLICMDKMTDHPKGTAFAQFKEKEAADACLAAV
TDPLKKEEFLVCGRYMHAMRAISRNDLDVKAKEKKEKVQKDKRNLYLAREGFIREGTQAA
VGVSKTDLALRVRLTQVKKRLLKNLHMFISPNRLCVNNLPEELTDKEFKKIFIDNSPKGA
KITEARIMKDMKTLSDDGTPASKGYGFITFTEHEHALQTLRKVNNNPDIFTVFKRPIVEF
SVENRAILNAREKRMEKSREMNPTWKNSKKAQKKNAEGKKKGEKKTGDKAKPAVAKKESK
TPTDAEESKLPAFVGTKSNANQGTSGAIMGNLGPKVRNRDKGQPQGKITRRKYRREMQDR
ATGKKRKRPQVDALDEAAMPVKKSKTSTEGKEGKMKKIKMKKKMNKEMKSAIREDAAFNK
MVAKYKEKMSSVGPKVPAKRWYED
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagggtcccaggagcgagcccacgtctgtaattgtaacgcaattaccgaaa
gaagcgtatagaagaccaattaatgactattttgggcaaattgggccagtcgtcagatca
catctagtcagagataatgagggcaattcaaagggcattgcctacattgtgtactcaaca
caagaggatgctgaaagatgtgtggaacaactcaacaattctaaatttcaagataaggtg
attcatgtaaagttgacaaagcagaaaggaggaaggaagaaatacgaagaagtagatgaa
gacccagaagttaaggaggaatccaacgatttttacgaagaggagccagaaaataaatat
gataataaatggaacccagcaaaggataggaatatgcggaaacaaggaagaatcgttgtg
agaaatttgtcctttaaggttgatgaagacatagtcagagaacatttttcaaaatttgga
gtcattgatgaaataaatttactgcgcaaaaaggatggccagcttgtgggttgtggtttt
atccaatttagaagcagatctgaagctctacgtgcaatagaggaatgcaatatgaagcca
ctgttaggtagaactatagctgtcgatatagccgtcccaaaagagaagttcacgggaaag
aatgaaaggacagagagctcccacagagactatggagatgatccgggaaattcagcggca
ggacctaatgagagattctattacaaggatgaacagaaaggaaactcccatgtaatattt
ggcgaggaagacacagattaccttaacgtgaagataaaggaagagagaatgagtgatgat
gaagaaatgactatagtaaaggaaaggagaagtgacaacaagagtgacagtaaagaagac
attaaagtgaaaagggaagacatgttagacgaagaaggggatgacagcggcgtggcggat
gacgagacggcaagcgaagacgaagaggagttcaagggaagccaggtcgtagatcctatg
gaaaaatcaaagccagccccaacgaagggacccagcaaggacgtagcagaagaaagaaca
ctgttcatccggaatgtgtctttcgatgccacagaggaagacgttggcaaggttttggag
aagttcggagagctaaagtatgtcttgatatgcatggacaagatgactgaccatccgaaa
ggcacagcatttgctcagttcaaggaaaaagaagcagctgatgcatgtctggcagcagtg
acggacccattgaagaaggaggaatttcttgtctgcggccgatatatgcatgccatgagg
gccatcagcaggaatgacttggacgtcaaggccaaggaaaaaaaagagaaagtccagaaa
gacaaacgaaacctttatcttgcacgggaaggatttattcgtgagggaacccaagcagct
gtaggtgtatccaagacggacctggcattgcgcgttaggctgacgcaggtgaagaagaga
ctattgaaaaaccttcacatgtttatctctccgaatcgcttgtgtgtgaacaacctgcca
gaggagctgactgataaagagttcaagaagatatttattgacaattcaccaaagggggct
aagattacggaggctcgcattatgaaagacatgaagactttatctgatgatggtactcct
gcgagcaagggatatggtttcatcacattcacagagcacgaacatgccctgcaaaccctg
aggaaagtcaacaacaacccagacatatttacagtgttcaagaggccaattgtggaattt
tcagtcgagaatcgggccatcctcaatgctcgtgagaagaggatggagaagagtagggag
atgaatcccacttggaagaacagcaagaaagcacagaagaaaaatgcagaaggcaagaag
aaaggtgaaaagaaaacaggagacaaagccaaaccggcagttgccaagaaggagagcaaa
acccccaccgacgcggaggaatccaaactgccagcctttgttggaacgaagagcaacgct
aatcaaggaaccagtggggccataatggggaacctcggaccaaaggttcgaaatcgcgac
aagggtcaacctcagggaaagatcacccgcagaaaatacagacgggagatgcaagaccgc
gctacagggaagaagcgtaaacgtcctcaggtcgatgctcttgatgaggcagcaatgcct
gtgaaaaaatccaagacaagtacagaaggaaaggaaggaaagatgaagaaaataaagatg
aagaaaaaaatgaacaaggaaatgaaaagtgccattagagaagatgcagcatttaataag
atggttgcaaaatacaaggaaaaaatgtcctccgtagggcctaaggtccctgctaagaga
tggtatgaagattag
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