Penaeus vannamei (Pacific white shrimp): 113818546
Help
Entry
113818546 CDS
T06111
Name
(RefSeq) semaphorin-1A isoform X1
KO
K06842
semaphorin 6
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
stn_TNFRSF12A
Motif
Other DBs
NCBI-GeneID:
113818546
NCBI-ProteinID:
XP_069983913
LinkDB
All DBs
Position
12:8803759..9153098
Genome browser
AA seq
749 aa
AA seq
DB search
MLSLLSLADELEAQIFPGNSSVTDYFRLLQRDGDSLLIGARNIVYNISIHNLEENYSQRI
VWYSTDKDSSVCFNKGKSVADCQNYIRVLAKEGDGQFLVCGTNAYKPLCRHYAQQADGSF
NFTETNGAGQCPYDPRHNSTYVYVDGELYSGTVADFQGTIPLIFRQPLKTDHNDYKQLNA
PDFVHSFDYGDFVFFFFRETAVEYMNCGKRVYSRVARVCKGDRGGGPQRLKNSWTSFLKS
RLNCSVPGGYPFYFDEIQSTTDIITGIYGGESHEIIYAVFTTPPNSIPGSAVCAFSMRAI
LDTFEGSFKEQQTLNSNWLPVHPSKVPEPRPGSCVPDSQTLPEFNVNFAKDHSLMDEAVP
GFFGRPLLIKAFFEYRFTKVVVDPQVNFQDGKTVDVLFIATDGGIIFKAINAQSSAGVDS
IDPVIIEEIRVFDRPVPIVNMQLAKQAGGEGKLIIITDDEVKSIDLHRCQRASSCSACVG
LQDPYCGWFVGHGRCGPLGSQFAGPVFQNVSGHHYQCSNKAPCPTEVETCAPCVCPEPPS
SRPPPVTEVTPTEGSVDHSTIYDPPVDEDYSFVESNRIPPITPAKDINVAKNNAVPGVAP
EGDLPNEILGPLGREPGIGIAYAEGGVTGPVVGASLEGPPIYSAETLAIAVTTACVAALV
IGFISGFLFSRKCRGDEYAHTYSETPYLDSKLSKRDNLVPSADPNMYTANNKHINNLVTN
YNPKNINGKSNTNTTTDSKLLKPAKCAYI
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcttctctcccttgcagatgagttggaggcgcagatcttcccaggaaacagt
agtgttacagactacttcagactactacagagagacggggattccctcctcatcggggcc
aggaacatcgtctataatatcagcattcataacctggaggaaaactacagtcagagaata
gtttggtactccacggataaggatagttccgtgtgcttcaacaagggcaagtctgtggcc
gactgccagaactacatccgggtcctggccaaggagggcgacggacagttcctcgtctgc
ggcaccaacgcgtataagccgctgtgtcgccactacgctcagcaggcggacgggagtttc
aacttcacggagacgaacggcgccggccagtgtccctacgatcccagacacaactccact
tacgtctatgttgatggcgagctgtactctggcaccgtagcggacttccagggaacgatt
ccacttatcttcaggcaacccttgaaaacggaccacaatgactacaaacagctcaatgct
ccggacttcgtgcactccttcgactacggcgacttcgtgttcttcttcttccgcgaaacc
gccgttgaatacatgaactgcgggaagcgcgtgtactctcgggtcgcgcgcgtgtgcaag
ggcgaccggggaggcggccctcagcgcttgaagaactcctggacgtccttcttgaagagc
agactcaactgctccgttcctgggggatatcccttctacttcgatgagatccagtctacg
acggacatcatcacgggcatctacggcggcgagagccacgagatcatctacgccgtgttc
acgacgcctccgaactccatcccggggtccgccgtctgcgccttctccatgcgggccatc
ctggataccttcgaggggtccttcaaggagcagcagacactcaactccaactggctccca
gtgcacccgtccaaggtgcctgagccacgaccaggaagttgtgtgcccgacagccagact
ctgccggagttcaacgtcaacttcgccaaggaccactcgctcatggacgaagctgtcccc
ggcttcttcgggcgcccgctcctcatcaaggccttcttcgagtaccgcttcaccaaagta
gtggttgatccgcaagtgaacttccaagacgggaagaccgtggatgtcctcttcatcgca
actgacggaggcattatcttcaaggccattaatgctcagtcgtcggcaggtgttgattcg
atcgaccccgtcatcattgaggaaatccgcgtgttcgaccggccagtccctatcgtgaac
atgcagctggccaagcaagcgggaggagaagggaagctcattatcatcacagacgatgaa
gtgaaatccattgatctccaccgctgccagagagcctcgtcctgcagcgcatgcgttgga
ctgcaggacccttactgcggttggttcgtgggccacgggcgctgcggtccgctcggttct
cagttcgcgggacccgtcttccagaatgtctcagggcatcactaccagtgctctaacaag
gccccgtgcccaactgaggtggagacctgcgccccctgtgtctgtcctgagcctccctcc
tcacgcccgccccctgttactgaagttacccctacagagggatcggttgatcattcgacc
atatatgatccgcctgtggatgaggattattccttcgtcgagagtaacagaattcccccc
attacacctgcaaaggacattaatgtggccaagaacaatgccgtaccaggtgtcgcaccg
gagggagacttacctaatgaaattcttgggcctctaggacgcgaacctgggattggcatc
gcatatgctgaaggcggcgttactggtcctgtcgttggtgcatcccttgagggtcctcct
atatattccgccgagactctagccattgctgtcacaacagcctgtgttgccgcactggtc
atcggcttcatctctgggttcctcttctctcgcaaatgcagaggggatgagtatgcacac
acatactctgaaacaccttatttggactcgaagctcagcaaacgagacaacttagtacca
tcagcggacccaaacatgtatacggccaacaacaaacacatcaataatttagtgactaac
tacaaccccaagaatatcaatggcaagtccaataccaacactactacggacagcaagctt
ctgaagcctgctaaatgtgcctatatttga
DBGET
integrated database retrieval system