Penaeus vannamei (Pacific white shrimp): 113818823
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Entry
113818823 CDS
T06111
Name
(RefSeq) RNA-binding protein cabeza isoform X1
KO
K13098
RNA-binding protein FUS
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03015
mRNA surveillance pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113818823
09122 Translation
03015 mRNA surveillance pathway
113818823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113818823
Spliceosome [BR:
pvm03041
]
Complex A
Other components
Complex A specific factors
113818823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_7
Motif
Other DBs
NCBI-GeneID:
113818823
NCBI-ProteinID:
XP_027226815
LinkDB
All DBs
Position
2:29891667..29906297
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AA seq
529 aa
AA seq
DB search
MGDTQYSYGGGYGSGGSGGAGGNYASYGGASGAAPPPATSYPPQPQYGGYSAPPPQGYSQ
GQAPYAAPPTYGAPPPQQGGQGASYGGYGQPPPTQAPAQPPTGSAGYSSYGGQSHGYEQN
SNYNSGSYGQTPASNYGGHQSSTYGSQPSTNYSTPPSQGNYGGPPPQGSYGGGPPPQGNY
GGGPPSGGNFGGQPGYGGPPPSNGSYEGQGGGYNSGLGMAPPPLSAPPGCGGMYGSPLKQ
SPAPIPRRDQGRGYCKEGGGGSYGGSRFDGGSRGGDRSRGESDLVMQEDTIFVSGMPDDA
SEDDVKDHFGSIGVIKMDKRTQRPKIWMYKDKATGRMKGECTVTFDDPFTAKSAIQWFDG
KEFMGRVVKVQMAERPKSSYERGRGGYGGGDDRGGRGRGGDRGFDRRGGSMGGPGRDGPP
GGGRGRAGDWKCPVPSCGNNNFAWRNSCNRCNEPKPAGVGGDDDGGGGGGGFRGGFRGRG
DRGGFRGRGGDRGRGGFRGRGGYGGDRDGDRDSGGPMKGDRGPGRSRPY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacacaatacagttacggaggtggatatgggagtggaggtagtggtggggca
ggaggtaactacgcaagttatggaggggcatcaggagctgctccaccgcctgcgacctcc
tatcctccacagccacagtatggtgggtactcagctccacctccacagggatactcacag
ggccaggccccatatgcagcaccaccaacttacggtgccccaccgccacagcaaggtggc
caaggcgcttcctatggtggctatgggcagccgccaccaacacaagcccctgcccagcca
cccactggcagtgctggatacagtagctatggcggacaatcacacggttatgaacaaaac
agtaattacaattctggaagttatggacagacacctgcaagcaattatggtggtcatcag
agtagtacttatggtagtcagcctagtacaaactactctactccaccatcccagggaaat
tatggagggccaccaccacaaggaagttatggtggtgggcctccccctcagggaaattat
gggggtggcccaccctcagggggaaactttgggggacagccaggatatggtggtccacca
ccctccaatggaagttacgagggacaaggtggtggatacaacagtggtctaggcatggct
cctccccccctgtcagcccctccaggctgtggtggcatgtacgggtcgccgctgaagcag
tccccggctcccattcctaggcgagatcaagggagaggttattgcaaagagggtggcggt
ggaagctacgggggtagccggtttgatggtggcagccgcggtggtgatcgatctagggga
gagtctgatctggtaatgcaggaagacacaatctttgtgtctggaatgccagatgatgcc
tctgaggatgatgtcaaggatcactttggttccattggtgtaatcaagatggataaaaga
actcaacgccctaagatttggatgtacaaagataaggccacaggaagaatgaaaggagag
tgtacagtcacatttgatgatccattcactgccaagtctgccattcagtggtttgacggc
aaagagttcatgggccgtgttgttaaggtacaaatggcagaacgcccaaaaagtagttat
gagcgaggacgtgggggctatggaggtggtgatgaccgtggtgggcgggggcgtggaggt
gaccgtggatttgaccggcgtggaggatctatgggaggaccggggcgagatgggcctcct
gggggtggacgtggacgtgcaggagactggaagtgccctgtgccaagctgtggtaacaac
aattttgcatggagaaacagctgcaaccgctgcaatgaaccaaagcctgcaggagttggt
ggtgatgatgatggtggtggaggtggtggtggattccgtggtggattccgtggccgcgga
gaccgtggaggtttcagaggcagggggggagaccgtggaagaggtggattcagaggccgt
ggaggctatggtggagaccgggatggagacagagattctggtggaccaatgaaaggggac
cgtggcccaggaaggtctagaccttattaa
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