KEGG   Penaeus vannamei (Pacific white shrimp): 113818909
Entry
113818909         CDS       T06111                                 
Name
(RefSeq) DNA repair protein XRCC1-like isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113818909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvm03400]
    113818909
DNA repair and recombination proteins [BR:pvm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113818909
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 LIG3_BRCT PTCB-BRCT RTT107_BRCT_5 K_channel_TID
Other DBs
NCBI-GeneID: 113818909
NCBI-ProteinID: XP_069974360
LinkDB
Position
41:2743251..2754712
AA seq 798 aa
MPVAPSAQPKQNIALKIDGAMPTIKFSEVLSFTSEDPNHPADNLLRQETHRKWKCAAGLS
EKQASVTLKLERLTSIRSIDIGNAGSAFVEVLAAREDANFKVLLVASSFMTPIESRNASD
LHRVRMFGPDKLNKDVASEKWDRIKVVCTQPFNKNLQYGLSFVTVSSAAEQETTPTAPKA
IKLGSFTLKEEDENDPISIGSVFARRKEKDASPSPLSGAAAIRAASAAAAATTATATAVG
GGGGGGGASSPGPGSLKRKALENPPDVGFYQLKKRPAHESGSKERDKPKMERAGSSTERK
NTAERKEEKEKKKIKEREKGGGEGSRKNSERRKEEEKTDKDGGETKRETHKKKREGSTGG
EGKTEKENLPTTSKKSQRKTEPFASLMKDVVFVMSGYQNPQRSNLRDMMLDMGAKYKQDW
EPSCTHLICAFTNTPKFLQVKGKGKIVTAKWITDCHKNKIRYPWRRYQLERDRNADESEE
EVWAEELLPKEERRAKSPAQKRRSSATDAADTDSYNMATDSESEEDTDDEIRRVLAKKKT
SERENGSVKHQQADSAERKDKNGDKKKPVPRKERETEREEEEEQQGKTANGKLREEVGAK
RAKVEASGDEPKKTVNGRKEGAGKERETSPASVAEGWEKRKGGKRVEKEGKTVERKEAEA
NGFAKGGNYKQEEDEDYDADTDVDEDNKKYLQPPDTSALPLPSLGDYFAGKTFFIYGRMD
ENTKKMVRRYIIAFNGTLEEYMTGEVQYVITEDEWDENFDAALEENASLQFVKPAWIWKC
SNKGKLVPHQPFLVVPRE
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgcccgtagccccttcggcgcaaccaaaacaaaacattgccttgaaaattgacggtgca
atgcccactattaagttttccgaggttttatccttcaccagcgaggatcctaatcacccc
gcagataacctcctgaggcaggaaacacaccggaaatggaagtgtgcagcaggattgtca
gagaaacaagcatcagttaccttgaagttagagcggcttacgtccattcgctccattgac
attggcaatgctgggtcagcgtttgtggaggttctggcagcacgggaggatgccaacttt
aaggtcctccttgtggcttcttcattcatgacccccatagagtcgagaaatgcatcagat
ctccacagagtgcgcatgtttgggcctgataaactgaacaaagacgtggccagcgagaaa
tgggaccgcatcaaggtggtgtgcacacagcccttcaacaagaacctgcagtatggactc
tccttcgtcacagtttcatctgcagcagagcaggagacaacacccacagccccaaaggca
attaagcttgggagttttaccctaaaggaggaagatgagaacgaccccatatccatcggc
tctgtcttcgctcgcagaaaggagaaggatgcttcaccctctcctctctcaggtgcagct
gcaatcagagctgcctcagccgcagcagcagcaacaacagcaacagcaacagcagtagga
ggaggaggaggagggggaggagcgagcagccctggaccagggagcctaaagagaaaagcc
ttggaaaatcctccagacgtgggcttctaccaactgaagaagaggcccgcacatgaaagc
ggaagcaaagaacgcgacaaaccaaaaatggagcgagcggggagcagtacagagaggaag
aacactgcggagaggaaggaggaaaaggagaagaagaagatcaaagagagagagaaagga
gggggtgaaggcagtagaaagaacagtgaaagaaggaaggaggaagagaaaacggataaa
gatggaggggagaccaaaagggagacccacaagaagaagagagaaggaagcacaggggga
gaagggaagacagagaaagagaatctcccaacaacatctaaaaagagccagaggaagacc
gagccgtttgcgtccctaatgaaggacgtggtgtttgtgatgagcggctaccagaacccg
cagaggtctaaccttcgcgacatgatgctggatatgggggcaaagtacaagcaggattgg
gagccctcttgcacgcacctcatatgtgctttcaccaacacgcccaaattccttcaggtg
aaaggcaaaggaaagatcgtgacagccaagtggatcaccgactgtcacaaaaacaagata
cgttacccatggaggaggtaccagctggagcgagaccgtaatgcagacgagagtgaagag
gaagtttgggctgaagagctcttgcccaaggaggagcgtcgtgccaagtctcccgctcag
aaacgcagatcatcagccacagatgcggccgacactgacagttacaacatggcaacagac
agcgaaagtgaagaagacacagatgatgaaatacgaagagtactggcaaaaaagaagacg
agtgagagagagaatggatcagtgaaacatcaacaggcggactcagcagagagaaaagac
aagaatggagacaagaagaagccagttccaagaaaagaaagagaaacagaaagagaagaa
gaggaagagcagcaggggaaaacagccaatgggaagctaagagaggaggttggagcaaaa
agggctaaggtggaagcctcaggggatgaacccaagaagacagtcaatggacggaaggag
ggagctggtaaggagcgtgagacgtcacccgcatccgtggcagaaggttgggaaaagcgg
aaaggagggaaacgggtggagaaagaaggaaagacagtggaaaggaaggaagcagaagca
aatggctttgcaaaggggggcaattataagcaggaggaagacgaggactacgatgctgac
acagatgtagacgaggacaataagaagtatctgcaaccaccggatacctcagccttaccc
ctcccttccctgggtgattacttcgctggcaagaccttcttcatctacggcagaatggat
gaaaacaccaagaagatggtgcgcagatatatcattgcgtttaatgggactctggaggag
tatatgacaggagaagtacagtatgtaatcactgaggatgaatgggatgagaactttgat
gccgccctggaggaaaacgcgagtttgcagtttgtgaagcctgcgtggatatggaagtgc
agcaacaaggggaagttggtccctcaccagccattcctggtggtgcctagggagtga

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