Penaeus vannamei (Pacific white shrimp): 113818969
Help
Entry
113818969 CDS
T06111
Name
(RefSeq) protein Tob1 isoform X1
KO
K14443
protein Tob/BTG
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113818969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113818969
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113818969
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113818969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
Motif
Other DBs
NCBI-GeneID:
113818969
NCBI-ProteinID:
XP_027226996
LinkDB
All DBs
Position
27:complement(28066282..28129758)
Genome browser
AA seq
475 aa
AA seq
DB search
MKMDMKLKRTTTHFVFLASRNSLEGAAEKADHLLYSIVCMAFGSRDGQQKQQAAPSASIP
ATPSREHAVSSSKHRLSCTSDNSRNVEPSDSPPKLPKMHLEIQVALNFVISYMYNKLPRR
RVNIFGEELEKALKEKFEGHWYPDKPMKGSAYRCLKTGDPIDPVLEKAAREAGMEIREIK
DNLPEDLAVWVDPGEVSYRIGEKGQIKVLYSEAAESATQEENLDKEVTKTFNPEAQCFKP
IDNLSSSLSNVSISPKSTSPYSASSPTPPFKQREASPISAFLTKSSAPLTFTTATFAQTK
FGSTKLKTSTKRANRMSPTEFSHYIKQRQMIQQQQHVQQQQQQQQQQAVAVATAGFGSQF
PPSRPRSLSPNPPLEAPGVYFPGGAPAGGAYNPWGRGMFDQGFTSPSFFTDLLPPASQQG
PAPKFPMYEPVNGGMMGGAAPGAASMGAGDKASGLNEGVMGVYPASQYQHLLVAN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatgaagttaaaacgcactaccacacattttgtattccttgcctcccgg
aattctctagaaggagctgcggaaaaggccgaccatctgctttactcgatcgtctgtatg
gcttttggatcgcgtgacggacagcagaagcagcaagcagcaccgagtgcaagcatcccc
gcgacaccgtctcgagaacacgccgtctcaagcagcaagcaccgtctcagttgtacctca
gacaacagccgtaacgtcgaaccctcagactcgcccccgaagctccccaaaatgcacctc
gagattcaggtagcgctcaacttcgtcatctcttacatgtacaacaaactgccgcggcga
agagtcaacattttcggcgaggagctggagaaggcgctgaaggagaagttcgagggccac
tggtatcccgacaagccgatgaagggctcggcgtaccgctgcctcaagacgggcgacccc
atcgaccccgtgctggagaaggccgccagagaggcaggcatggagatccgggagatcaag
gacaacctgccggaggacctcgccgtgtgggtggaccccggcgaggtctcctacaggatc
ggcgagaagggccagatcaaggtgctgtattcggaggccgccgagtccgccacgcaggag
gagaacctcgacaaggaggtgaccaagaccttcaacccggaggcgcagtgcttcaagccc
atcgacaacttgagttcgtccctcagcaacgtgtcgatcagccccaagtcgacgtccccg
tactccgccagctcgcccacgccgcccttcaagcagcgggaggcgtcccccatcagcgcc
ttcctcaccaagagctccgccccgctcaccttcaccaccgccaccttcgcccagacaaaa
ttcggctccacgaagttaaagacgagcaccaagcgagccaaccgcatgtcgcccacggag
ttctcccactacatcaagcagcgccagatgatccagcagcagcagcacgtacagcagcag
caacagcagcagcagcagcaggcagtggcggtagcgacggccggcttcggcagccagttc
cccccgtccaggccgcgctccctcagccccaacccgccgctggaggcccccggcgtgtac
ttccccgggggcgcccccgccggaggggcctacaacccctggggccgcggcatgttcgac
cagggcttcacctcaccgtccttcttcaccgacctgctcccccccgccagccagcaggga
cccgcccccaagttccccatgtacgagcccgtgaacggaggcatgatgggcggggccgcc
cctggcgctgcttccatgggcgcgggtgacaaagcctctggtctgaacgagggcgtgatg
ggcgtgtacccagcctcccagtaccagcacctcctggtggccaactag
DBGET
integrated database retrieval system