KEGG   Penaeus vannamei (Pacific white shrimp): 113818969
Entry
113818969         CDS       T06111                                 
Name
(RefSeq) protein Tob1 isoform X1
  KO
K14443  protein Tob/BTG
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113818969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvm03019]
    113818969
Messenger RNA biogenesis [BR:pvm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113818969
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     113818969
SSDB
Motif
Pfam: BTG
Other DBs
NCBI-GeneID: 113818969
NCBI-ProteinID: XP_027226996
LinkDB
Position
27:complement(28066282..28129758)
AA seq 475 aa
MKMDMKLKRTTTHFVFLASRNSLEGAAEKADHLLYSIVCMAFGSRDGQQKQQAAPSASIP
ATPSREHAVSSSKHRLSCTSDNSRNVEPSDSPPKLPKMHLEIQVALNFVISYMYNKLPRR
RVNIFGEELEKALKEKFEGHWYPDKPMKGSAYRCLKTGDPIDPVLEKAAREAGMEIREIK
DNLPEDLAVWVDPGEVSYRIGEKGQIKVLYSEAAESATQEENLDKEVTKTFNPEAQCFKP
IDNLSSSLSNVSISPKSTSPYSASSPTPPFKQREASPISAFLTKSSAPLTFTTATFAQTK
FGSTKLKTSTKRANRMSPTEFSHYIKQRQMIQQQQHVQQQQQQQQQQAVAVATAGFGSQF
PPSRPRSLSPNPPLEAPGVYFPGGAPAGGAYNPWGRGMFDQGFTSPSFFTDLLPPASQQG
PAPKFPMYEPVNGGMMGGAAPGAASMGAGDKASGLNEGVMGVYPASQYQHLLVAN
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaaaatggacatgaagttaaaacgcactaccacacattttgtattccttgcctcccgg
aattctctagaaggagctgcggaaaaggccgaccatctgctttactcgatcgtctgtatg
gcttttggatcgcgtgacggacagcagaagcagcaagcagcaccgagtgcaagcatcccc
gcgacaccgtctcgagaacacgccgtctcaagcagcaagcaccgtctcagttgtacctca
gacaacagccgtaacgtcgaaccctcagactcgcccccgaagctccccaaaatgcacctc
gagattcaggtagcgctcaacttcgtcatctcttacatgtacaacaaactgccgcggcga
agagtcaacattttcggcgaggagctggagaaggcgctgaaggagaagttcgagggccac
tggtatcccgacaagccgatgaagggctcggcgtaccgctgcctcaagacgggcgacccc
atcgaccccgtgctggagaaggccgccagagaggcaggcatggagatccgggagatcaag
gacaacctgccggaggacctcgccgtgtgggtggaccccggcgaggtctcctacaggatc
ggcgagaagggccagatcaaggtgctgtattcggaggccgccgagtccgccacgcaggag
gagaacctcgacaaggaggtgaccaagaccttcaacccggaggcgcagtgcttcaagccc
atcgacaacttgagttcgtccctcagcaacgtgtcgatcagccccaagtcgacgtccccg
tactccgccagctcgcccacgccgcccttcaagcagcgggaggcgtcccccatcagcgcc
ttcctcaccaagagctccgccccgctcaccttcaccaccgccaccttcgcccagacaaaa
ttcggctccacgaagttaaagacgagcaccaagcgagccaaccgcatgtcgcccacggag
ttctcccactacatcaagcagcgccagatgatccagcagcagcagcacgtacagcagcag
caacagcagcagcagcagcaggcagtggcggtagcgacggccggcttcggcagccagttc
cccccgtccaggccgcgctccctcagccccaacccgccgctggaggcccccggcgtgtac
ttccccgggggcgcccccgccggaggggcctacaacccctggggccgcggcatgttcgac
cagggcttcacctcaccgtccttcttcaccgacctgctcccccccgccagccagcaggga
cccgcccccaagttccccatgtacgagcccgtgaacggaggcatgatgggcggggccgcc
cctggcgctgcttccatgggcgcgggtgacaaagcctctggtctgaacgagggcgtgatg
ggcgtgtacccagcctcccagtaccagcacctcctggtggccaactag

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