KEGG   Penaeus vannamei (Pacific white shrimp): 113819157
Entry
113819157         CDS       T06111                                 
Symbol
PolD2
Name
(RefSeq) DNA polymerase delta subunit 2
  KO
K02328  DNA polymerase delta subunit 2
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03030  DNA replication
pvm03410  Base excision repair
pvm03420  Nucleotide excision repair
pvm03430  Mismatch repair
pvm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113819157 (PolD2)
   03410 Base excision repair
    113819157 (PolD2)
   03420 Nucleotide excision repair
    113819157 (PolD2)
   03430 Mismatch repair
    113819157 (PolD2)
   03440 Homologous recombination
    113819157 (PolD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pvm03032]
    113819157 (PolD2)
   03400 DNA repair and recombination proteins [BR:pvm03400]
    113819157 (PolD2)
DNA replication proteins [BR:pvm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    113819157 (PolD2)
DNA repair and recombination proteins [BR:pvm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      113819157 (PolD2)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     113819157 (PolD2)
SSDB
Motif
Pfam: DNA_pol_D_N DNA_pol_E_B
Other DBs
NCBI-GeneID: 113819157
NCBI-ProteinID: XP_027227201
LinkDB
Position
18:18880478..18901611
AA seq 462 aa
MILDSCTSEMKAEVLLSEPRDSEDAPAHKAERQEVSYESLSSKYKLWGNKDVTRQYFKMY
SARLEKMRPVVEAKAKDKWGSDTTLKRLHELDDETGKCIIVGTLFKRQTLKPSILKEISE
EHHLMPQPVLEKYVSNDDDLILEDELQRIQLVGNIDIPNLVTGIICAVLGQEGSGGKFAV
EDICFAGLPEPVKHDVVEDDRYVVLISGLELSSSVDSLLSLELLIDYLSGHLGHSEEQAA
VANISRVVIAGNSVSCAKGEKEKPDKLKLVKELDDILTQIASVCSVDLMPGEFDPANHVM
PQQPLHRCMFPKAAVYSSMQSVSNPYECIIGGRVFIGMSGQNVKDIGRCSTIEDPLVALG
NICEWGHLAPTAPDTLVSYPYEGQEPFIIDTCPDVIFAGNQDSFGTTVKDVSGHKVTLVS
IPRFSDTGMCVAVNLRNLQCQPICFSVDGNTLVETSSPEVEK
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgattctcgacagctgcacttccgagatgaaggccgaggtcctgttgagtgagccgagg
gacagcgaagacgctccagcacacaaagcagagcggcaggaggtgtcctacgagagcctc
tccagcaagtacaagttatggggcaacaaagacgtgacgagacagtatttcaagatgtat
tcggcgaggttggagaagatgaggcctgtggttgaagccaaagccaaggacaagtggggt
tcagataccaccctgaaacgacttcacgaactggatgatgaaacggggaagtgtatcatt
gttggaacactcttcaaacggcagactctaaagccatccattctgaaggagatttcagaa
gagcaccatctgatgccacaaccagttttagaaaagtatgtaagcaatgatgatgatctc
atacttgaggatgaactacagagaattcagttggtgggaaacatagatattcccaacctg
gttacagggatcatttgtgctgttctaggccaagagggctctggtggcaaatttgctgtg
gaggatatctgttttgctggacttccagagcctgtgaagcacgatgtggttgaggatgat
agatatgtagtgctcatatctggactggagttgagctcatcagtggactccctcttatcc
ctggaactactgatcgattatctctctgggcatttgggtcactcagaggagcaagcagct
gtggccaacatctctagagttgttattgctggaaactctgtcagttgcgcaaagggggag
aaggaaaagccagacaaattgaagttggtgaaagaacttgacgacatattaacacagatt
gcgagtgtgtgttccgtagacttaatgcctggggaatttgacccagccaaccatgtgatg
ccgcagcagcctctccatcgttgcatgttcccaaaggcagcagtctattcctccatgcaa
agtgtttcaaacccttatgaatgtattattggaggaagggtattcattgggatgtctggc
caaaatgtgaaggatattggccgttgttctacaattgaggatccccttgttgcactagga
aacatctgtgagtggggccatctagcacctactgcccctgatactcttgtttcttacccc
tatgaaggacaggagcccttcatcattgatacctgtccagatgtgatttttgcgggaaat
caggattcatttggaacaacagtaaaagatgtaagtggtcacaaggttacactagtgagt
attccacgattcagtgacacaggaatgtgtgttgcagtgaacctccgtaatctacagtgt
cagccaatatgcttctcagtggatggaaatactttagttgaaacttcaagtcctgaagtt
gaaaagtga

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